Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
>protein
FEKGYSQMDWLKLTRTHPDLAGLKGQLNRRLISLEEVKQHKTGDSIWTVLKGRVYNIAPYMKFHPGGVDMLMKAAGKDST
ALFNKYHAWVNFEFLLEKCLVGFLDPNE

The query sequence (length=108) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 8tgb:A 108 108 1.0000 1.0000 1.0000 3.15e-79 8tgb:B
2 3lf5:A 87 77 0.3704 0.4598 0.5195 1.96e-26 3lf5:B
3 2i89:A 90 75 0.2500 0.3000 0.3600 6.66e-13 2i89:B, 2i89:C, 2i89:D, 1icc:A, 1icc:B, 1icc:D, 1lj0:A, 1lj0:B, 1lj0:C, 1lj0:D, 3mus:B
4 1awp:A 86 75 0.2407 0.3023 0.3467 1.44e-12 1awp:B, 1b5m:A, 1eue:A, 1eue:B, 4hil:A, 4hil:B, 1icc:C, 3mus:A
5 1kbi:A 504 65 0.2500 0.0536 0.4154 1.77e-11 1fcb:A, 1fcb:B, 1kbi:B, 1kbj:A, 1kbj:B, 3ks0:A, 3ks0:B, 1lco:A, 1lco:B, 1ldc:A, 1ltd:A, 1ltd:B, 2oz0:A, 2oz0:B, 1qcw:A, 1qcw:B, 1sze:A, 1sze:B, 1szf:A, 1szf:B, 1szg:A, 1szg:B
6 1aw3:A 94 76 0.2222 0.2553 0.3158 2.35e-11 1axx:A, 2axx:A, 1b5a:A, 1b5b:A, 1bfx:A, 1blv:A, 1do9:A, 1mny:A
7 3ozz:B 82 76 0.2130 0.2805 0.3026 3.25e-11
8 4b8n:B 90 69 0.2037 0.2444 0.3188 1.92e-10 4b8n:A, 4b8n:C, 4b8n:D
9 1hko:A 104 76 0.2130 0.2212 0.3026 4.93e-10 1aqa:A, 1cyo:A, 1ehb:A, 1es1:A, 1f03:A, 1f04:A, 1i5u:A, 1ib7:A, 1j0q:A, 1jex:A, 1lqx:A, 1lr6:A, 1m20:A, 1m2i:A, 1m2m:A, 1m59:A, 1nx7:A, 1sh4:A, 1u9m:A, 1u9m:B, 1u9m:C, 1u9m:D, 1u9m:E, 1u9m:F, 1u9u:A, 3x32:A, 3x33:A, 3x34:A, 3x35:A
10 2i96:A 108 76 0.2037 0.2037 0.2895 1.04e-09 4hin:A, 4hin:B, 4hin:C, 4hin:D, 2m33:A
11 3ner:B 91 75 0.2037 0.2418 0.2933 1.36e-09 3ner:A
12 1cxy:A 81 50 0.1667 0.2222 0.3600 2.89e-09
13 2ibj:A 86 48 0.1667 0.2093 0.3750 6.02e-08
14 7bwh:A 88 62 0.1852 0.2273 0.3226 1.35e-06
15 1x3x:A 82 49 0.1759 0.2317 0.3878 2.10e-06 1x3x:B
16 1sox:A 463 77 0.2130 0.0497 0.2987 1.55e-04 2a9a:A, 2a9a:B, 2a9b:A, 2a9c:A, 2a9c:B, 2a9d:A, 2a9d:B, 3hbp:A, 3hbq:A, 1sox:B
17 1mj4:A 79 46 0.1574 0.2152 0.3696 1.95e-04
18 7pzb:A 227 52 0.1759 0.0837 0.3654 0.024 7pza:A, 7pza:B, 7pzb:B
19 9c4d:E 140 39 0.1111 0.0857 0.3077 0.25 9c4c:E, 9c4c:F, 9c4c:G, 9c4c:H, 9c4d:F, 9c4d:G, 9c4d:I, 9c4d:D, 9c4d:H, 9c4d:J, 9c4d:C, 2ev0:A, 2ev0:B, 2ev5:A, 2ev5:B, 2ev6:A, 2ev6:B, 2f5c:A, 2f5d:A, 2f5d:B, 2f5e:A, 2f5e:B, 2f5f:A, 2f5f:B, 4hv5:A, 4hv5:B, 4hv6:A, 4hv6:B, 4hx4:A, 4hx4:B, 1on1:A, 1on1:B, 1on2:A, 1on2:B, 3r60:A, 3r60:B, 3r61:A, 3r61:B
20 5c7t:A 182 70 0.2130 0.1264 0.3286 2.9 5c7t:B, 5c8l:A, 5c8l:B
21 1xvt:A 402 55 0.1667 0.0448 0.3273 4.5 1xa4:B, 1xvu:A, 1xvv:A
22 7yia:A 492 35 0.1111 0.0244 0.3429 4.7
23 3bu7:B 358 105 0.2685 0.0810 0.2762 6.0 3bu7:A
24 1qwz:A 235 48 0.1111 0.0511 0.2500 7.1 4lfd:A, 4lfd:B, 4lfd:C, 4lfd:D, 1qx6:A, 1qxa:A
25 6kgy:B 441 33 0.1019 0.0249 0.3333 7.3 6kgy:A, 6kgy:C, 6kgy:D, 6kod:A, 6kod:B, 6kod:C, 6kod:D, 6kyy:A, 6kyy:B, 6kyy:C, 6kyy:D
26 3j9z:SC 232 51 0.1481 0.0690 0.3137 8.6 4a2i:C, 8a3l:C, 7abz:h, 7ac7:h, 7acj:h, 7acr:h, 4adv:C, 5afi:c, 7af3:C, 7af5:C, 7af8:C, 7afa:C, 7afd:C, 7afh:C, 7afk:C, 7afn:C, 8akn:D, 8am9:D, 6awb:F, 6awc:F, 6awd:F, 9ax7:C, 9ax8:c, 8aye:C, 8b0x:C, 7b5k:c, 8b7y:E, 8bf7:g, 8bge:g, 8bgh:g, 8bh4:g, 8bhj:g, 8bhl:g, 8bhn:g, 8bhp:g, 8bil:g, 8bim:g, 7boe:C, 7boh:C, 6bu8:C, 6by1:AC, 6by1:BC, 6c4i:c, 8ca7:C, 8caz:C, 8cf1:C, 8cf8:C, 8cgi:C, 8cgj:C, 9cg5:C, 9cg6:C, 9cg7:C, 7cpj:c, 7d6z:j, 7d80:D, 6dnc:PA, 8eiu:C, 8ekc:c, 8emm:C, 6enf:c, 6enj:c, 6enu:c, 8eyq:C, 8eyt:F, 9fbv:C, 8fiz:AG, 8fto:C, 8fzd:c, 8fze:c, 8fzf:c, 8fzg:c, 8fzh:c, 8fzi:c, 8fzj:c, 8g2u:b, 8g31:x, 8g34:x, 8g38:x, 8g6w:C, 8g7p:c, 8g7q:c, 8g7r:c, 8g7s:c, 8ghu:c, 6gwt:c, 6gxm:c, 6gxn:c, 6gxo:c, 6gxp:c, 6h4n:c, 5h5u:j, 6h58:c, 6h58:cc, 6hrm:h, 8hsp:C, 8htz:C, 8hu1:C, 6i7v:AC, 6i7v:BC, 8ifb:C, 8ifc:C, 5iqr:h, 5it8:AC, 5it8:BC, 5j5b:AC, 5j5b:BC, 5j7l:AC, 5j7l:BC, 5j88:AC, 5j88:BC, 5j8a:AC, 5j8a:BC, 3j9y:c, 5j91:AC, 5j91:BC, 3ja1:SC, 3jbu:C, 3jbv:C, 3jcd:c, 3jce:c, 3jcj:h, 3jcn:c, 5jc9:AC, 5jc9:BC, 7jss:H, 7jsw:H, 7jsz:H, 8jsg:h, 5jte:AC, 7jt1:H, 7jt2:H, 7jt3:H, 5ju8:AC, 7k00:C, 8k3o:C, 8k4e:C, 7k50:H, 7k51:H, 7k52:H, 7k53:H, 7k54:H, 7k55:H, 5kcr:1c, 5kcs:1c, 5kps:8, 5kpv:7, 5kpw:7, 5kpx:7, 5l3p:c, 6lkq:B, 7lv0:H, 5lza:c, 5lzb:c, 5lzc:c, 5lzd:c, 5lze:c, 5lzf:c, 7m5d:h, 5mdv:h, 5mdw:h, 5mdy:h, 5mdz:h, 5me0:C, 5me1:C, 5mgp:c, 5my1:C, 7n1p:SC, 7n2c:SC, 7n2u:SC, 7n2v:SC, 7n30:SC, 7n31:SC, 7nar:C, 7nat:C, 7nau:C, 7nav:C, 7nax:C, 7nbu:C, 5no4:C, 5np6:F, 6nqb:C, 7nso:c, 7nsp:c, 7nsq:c, 5nwy:2, 7nwt:h, 7nww:g, 7o19:AC, 7o1a:AC, 7o1c:AC, 5o2r:c, 6o7k:h, 6o9j:c, 6o9k:c, 7oe0:C, 7oe1:C, 6ofx:H, 6og7:H, 6ogf:H, 6ogg:H, 6ogi:H, 7oif:g, 7oig:g, 7oii:g, 7oiz:C, 7oj0:C, 6om6:h, 6ore:h, 6orl:h, 6osk:h, 6osq:h, 6ost:h, 6ot3:h, 7ot5:g, 7otc:c, 6ouo:h, 8p16:h, 8p17:h, 8p18:h, 7p3k:C, 8peg:C, 8phj:C, 7pjs:c, 7pjt:c, 7pju:c, 7pjv:c, 7pjw:c, 7pjx:c, 7pjy:c, 7pjz:c, 8pkl:C, 8pva:C, 7q4k:AC, 8q4f:C, 6q97:h, 6q98:h, 6q9a:h, 7qg8:2, 7qgh:2, 7qgn:2, 7qgr:2, 8qk7:h, 8qoa:C, 8r3v:C1, 8r3v:C2, 8r6c:C, 8r8m:C, 8rcl:C1, 8rcl:C2, 8rcm:C1, 8rcm:C2, 8rcs:C1, 8rcs:C2, 8rct:C1, 8rct:C2, 7s1g:E, 7s1h:E, 7s1i:E, 7s1j:E, 7s1k:E, 7sa4:h, 7ss9:H, 7ssd:H, 7ssl:H, 7ssn:H, 7sso:H, 7ssw:H, 7st2:H, 7st6:H, 7st7:H, 8syl:c, 6szs:c, 8t5d:b, 8t5h:b, 6tbv:S031, 6tc3:S031, 7tos:S03, 4u1u:AC, 4u1u:CC, 4u1v:AC, 4u1v:CC, 4u20:AC, 4u20:CC, 4u24:AC, 4u24:CC, 4u25:AC, 4u25:CC, 4u26:AC, 4u26:CC, 4u27:AC, 4u27:CC, 5u4i:c, 5u9f:C, 5u9g:C, 7ug7:SC, 7uph:X, 8upo:I, 8upr:I, 8uql:I, 8uqm:I, 8uqp:I, 8ur0:I, 8urh:I, 8uri:I, 8urx:I, 8ury:I, 5uyk:C, 5uyl:C, 5uym:C, 5uyn:C, 5uyp:C, 5uyq:C, 5uz4:C, 4v4h:AC, 4v4h:CC, 4v4q:AC, 4v4q:CC, 4v4v:AC, 4v4w:AC, 4v50:AC, 4v50:CC, 4v52:AC, 4v52:CC, 4v53:AC, 4v53:CC, 4v54:AC, 4v54:CC, 4v55:AC, 4v55:CC, 4v56:AC, 4v56:CC, 4v57:AC, 4v57:CC, 4v5b:BC, 4v5b:DC, 4v5h:AC, 4v5y:AC, 4v5y:CC, 4v64:AC, 4v64:CC, 4v65:AO, 4v66:AO, 4v69:AC, 4v6c:AC, 4v6c:CC, 4v6d:AC, 4v6d:CC, 4v6e:AC, 4v6e:CC, 4v6k:BG, 4v6l:AG, 4v6m:AC, 4v6n:BF, 4v6o:AF, 4v6p:AF, 4v6q:AF, 4v6r:AF, 4v6s:BE, 4v6t:AC, 4v6v:AC, 4v6y:AC, 4v6z:AC, 4v70:AC, 4v71:AC, 4v72:AC, 4v73:AC, 4v74:AC, 4v75:AC, 4v76:AC, 4v77:AC, 4v78:AC, 4v79:AC, 4v7a:AC, 4v7b:AC, 4v7c:AC, 4v7d:BC, 4v7i:BC, 4v7s:AC, 4v7s:CC, 4v7t:AC, 4v7t:CC, 4v7u:AC, 4v7u:CC, 4v7v:AC, 4v7v:CC, 4v85:AC, 4v89:AC, 4v9c:AC, 4v9c:CC, 4v9d:AC, 4v9d:BC, 4v9o:BC, 4v9o:DC, 4v9o:HC, 4v9o:FC, 4v9p:BC, 4v9p:DC, 4v9p:HC, 4v9p:FC, 8vs9:S03, 8vsa:S03, 6vu3:I, 6vwl:b, 6vwm:b, 6vwn:b, 6vyq:I, 6vyr:I, 6vys:I, 6vyt:I, 6vyu:I, 6vyw:I, 6vyx:I, 6vyy:I, 6vyz:I, 6vz2:I, 6vz3:I, 6vz5:I, 6vz7:I, 6vzj:I, 6w6k:C, 6w77:C, 6w7m:C, 6w7n:C, 5wdt:c, 6wd0:H, 6wd1:H, 6wd2:H, 6wd3:H, 6wd4:H, 6wd5:H, 6wd6:H, 6wd7:H, 6wd8:H, 6wd9:H, 6wda:H, 6wdb:H, 6wdc:H, 6wdd:H, 6wde:H, 6wdf:H, 6wdg:H, 6wdh:H, 6wdi:H, 6wdj:H, 6wdk:H, 6wdl:H, 6wdm:H, 5we4:c, 5we6:c, 4wf1:AC, 4wf1:CC, 5wf0:c, 5wfk:c, 5wfs:c, 6wnv:H, 6wnw:H, 4woi:AC, 4woi:DC, 4www:QC, 4www:XC, 6x6t:I, 6x7f:I, 6x7k:I, 6x9q:I, 6xdq:I, 6xdr:I, 6xe0:B, 6xgf:I, 6xii:I, 6xij:I, 6xza:C1, 6xzb:C1, 6y69:c, 7y7c:C, 7y7d:C, 7y7e:C, 7y7f:C, 7y7g:C, 7y7h:C, 4ybb:AC, 4ybb:BC, 2ykr:C, 6ysr:c, 6yss:c, 6yst:c, 6ysu:c, 6ztj:AC, 6ztl:AC, 6ztm:AC, 6ztn:AC, 6zto:AC, 6ztp:AC, 7zta:S031, 6zu1:AC

[Back]

Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218