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BioLiP
>protein
EYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNCAALNENLLDSELFGHEA
GAFTGAQKRHPGRFERADGGTLFLDELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMVNEGTFR
ADLLDRLAFDVVQLPPLRERESDIMLMAEYFAIQMCREIKLPLFPGFTERARETLLNYRWPGNIRELKNVVERSVYRHGT
SDYPLDDIIIDPFKRR

The query sequence (length=256) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7qv9:a 259 256 1.0000 0.9884 1.0000 0.0 2c96:A, 2c98:A, 2c99:A, 2c9c:A, 4qnr:A, 4qos:A, 7qv9:b, 7qv9:c, 7qv9:f, 7qv9:e, 2vii:A
2 1ojl:E 285 231 0.4336 0.3895 0.4805 2.38e-69
3 1ny5:B 385 227 0.4180 0.2779 0.4714 2.60e-68 4bs1:A, 4bs1:B, 4bt0:A, 4bt0:B, 4bt1:A, 4bt1:B, 4ly6:A, 4ly6:B, 4ly6:C, 4ly6:D, 4ly6:E, 4ly6:G, 4ly6:H, 4ly6:I, 4ly6:J, 4ly6:K, 4ly6:L, 4ly6:M, 4ly6:N, 4ly6:O, 4ly6:P, 4ly6:Q, 4ly6:R, 4ly6:S, 4ly6:T, 4ly6:U, 4ly6:V, 4ly6:W, 4ly6:X, 4lzz:A, 4lzz:B, 4lzz:C, 4lzz:D, 4lzz:E, 4lzz:F, 4lzz:G, 4lzz:H, 4lzz:I, 4lzz:J, 4lzz:K, 4lzz:L, 4lzz:M, 4lzz:N, 4lzz:O, 4lzz:P, 4lzz:Q, 4lzz:R, 4lzz:S, 4lzz:T, 4lzz:U, 4lzz:V, 4lzz:W, 4lzz:X, 3m0e:A, 3m0e:B, 3m0e:C, 3m0e:D, 3m0e:E, 3m0e:F, 3m0e:G, 1ny5:A, 1ny6:A, 1ny6:B, 1ny6:C, 1ny6:D, 1ny6:E, 1ny6:F, 1ny6:G, 1ny6:H, 1ny6:I, 1ny6:J, 1ny6:K, 1ny6:L, 1ny6:M, 1ny6:N, 1zy2:A
4 3dzd:A 368 230 0.4219 0.2935 0.4696 3.63e-68 3dzd:B
5 8pb9:D 390 234 0.4141 0.2718 0.4530 1.01e-60 7ejw:C, 5exs:A, 5ext:A, 5exx:A, 6j7e:A, 6jdi:A, 6jdl:A
6 4qht:C 248 222 0.3711 0.3831 0.4279 4.03e-60 6luf:A, 6luf:B, 6luf:C, 6luf:D, 6luf:E, 6luf:F, 6luf:G, 4qht:A, 4qht:B, 4qht:D, 4qht:E, 4qht:F, 4qht:G
7 6iy8:A 469 229 0.4062 0.2217 0.4541 4.18e-59 6iy8:B, 6iy8:C, 6iy8:D
8 5ep3:A 253 230 0.3906 0.3953 0.4348 1.80e-53 5ep2:A, 5ep4:A
9 7vbw:A 238 227 0.3633 0.3908 0.4097 8.94e-48
10 5m7n:B 428 233 0.3398 0.2033 0.3734 1.48e-45
11 5m7o:A 448 232 0.3398 0.1942 0.3750 2.25e-45 4d6y:A, 4d6y:B, 5m7n:A, 5m7o:B, 5m7p:A, 5m7p:B
12 7v2b:D 376 235 0.3320 0.2261 0.3617 2.42e-41 7v2b:A, 7v3w:A, 7v3w:D
13 3k1j:A 566 108 0.1328 0.0601 0.3148 0.001 3k1j:B
14 6hyp:A 2272 43 0.0625 0.0070 0.3721 0.021
15 6hyp:A 2272 106 0.1289 0.0145 0.3113 0.042
16 6hyp:A 2272 124 0.1289 0.0145 0.2661 4.7
17 5jcs:s 2003 42 0.0625 0.0080 0.3810 0.025
18 5jcs:s 2003 131 0.1445 0.0185 0.2824 0.24
19 6vfs:A 295 94 0.0938 0.0814 0.2553 0.026
20 3sng:A 267 81 0.0938 0.0899 0.2963 0.13 4dj4:A, 4dj4:B, 4jdg:A
21 1um8:A 327 117 0.1094 0.0856 0.2393 0.21
22 5txv:B 337 46 0.0703 0.0534 0.3913 0.29 6pxk:J, 6pxk:D, 6pxl:E, 6pxl:J, 5txv:A, 5txv:D, 5txv:G, 5txv:J, 5txv:K, 5txv:N, 5txv:S, 5txv:U
23 6vfx:F 321 94 0.0977 0.0779 0.2660 0.31 6vfs:B
24 5yzg:D 1908 68 0.0859 0.0115 0.3235 0.51 6ahd:D, 8bc8:B, 8bc9:B, 8bca:B, 8bcb:B, 8bcc:B, 8bcd:B, 8bce:B, 8bcf:B, 8bcg:B, 8bch:B, 7bdi:B, 7bdj:B, 7bdk:B, 7bdl:B, 4f92:B, 4f93:B, 6ff7:r, 8h6k:5D, 8h6l:5D, 4kit:B, 5o9z:C, 7os1:B, 8qo9:B, 8qzs:B, 5urj:A, 5urk:A, 5urm:A, 5urm:B, 5xjc:D
25 5ubv:A 244 32 0.0625 0.0656 0.5000 1.1 5ubv:B
26 7zpq:CA 1742 93 0.0977 0.0144 0.2688 1.3 7zrs:CA, 7zuw:CA
27 8evo:B 242 72 0.0781 0.0826 0.2778 1.3 4cvy:A, 4cvy:B, 4cvy:C, 4cvy:D
28 7wi4:A 410 95 0.0938 0.0585 0.2526 2.2 7wi4:D, 7wi4:E, 7wi4:F, 7wi4:B, 7wi4:C
29 5txv:T 318 43 0.0625 0.0503 0.3721 2.5 5txv:P
30 1im2:A 346 41 0.0625 0.0462 0.3902 2.6 1g3i:T, 1g41:A
31 3x17:B 548 28 0.0547 0.0255 0.5000 2.7 3x17:A
32 1g3i:A 326 41 0.0625 0.0491 0.3902 2.7 1g3i:B, 1g3i:C, 1g3i:D, 1g3i:E, 1g3i:F, 1g3i:S, 1g3i:U, 1g3i:V, 1g3i:W, 1g3i:X, 1kyi:A, 1kyi:B, 1kyi:C, 1kyi:D, 1kyi:E, 1kyi:F, 1kyi:S, 1kyi:T, 1kyi:U, 1kyi:V, 1kyi:W, 1kyi:X
33 1e94:E 408 41 0.0625 0.0392 0.3902 3.0 1do0:A, 1do0:B, 1do0:D, 1do0:E, 1do2:A, 1do2:C, 1e94:F, 1hqy:E, 1hqy:F, 1ht1:E, 1ht1:F, 1ht1:G, 1ht1:I, 1ht2:E, 1ht2:F, 1ht2:G, 1ht2:H, 6pxk:H, 6pxk:L, 6pxk:B, 6pxl:C, 6pxl:D, 6pxl:H, 6pxl:L, 1yyf:A, 1yyf:B
34 5txv:X 360 41 0.0625 0.0444 0.3902 3.0 1g4a:E, 1g4a:F, 5ji2:F, 5ji3:F, 5txv:F, 5txv:I, 5txv:M, 5txv:O, 5txv:R, 5txv:V, 5txv:W
35 6pxk:F 388 41 0.0625 0.0412 0.3902 3.1 5ji2:E, 5ji3:E, 6pxi:E, 6pxi:F, 6pxk:G, 6pxl:A, 6pxl:I, 5txv:C, 5txv:E, 5txv:H, 5txv:L, 5txv:Q
36 6pxk:K 429 41 0.0625 0.0373 0.3902 3.1 6pxk:I, 6pxk:A, 6pxk:C, 6pxk:E, 6pxl:B, 6pxl:F, 6pxl:G, 6pxl:K
37 1ofh:A 309 41 0.0625 0.0518 0.3902 3.5 1ofh:B, 1ofh:C, 1ofi:A, 1ofi:B, 1ofi:C
38 7n59:A 590 29 0.0430 0.0186 0.3793 3.9 7n59:B, 7n5a:A, 7n5a:B, 7n5b:A, 7n5b:B
39 6vfs:F 302 129 0.1172 0.0993 0.2326 4.0
40 7ev6:A 594 68 0.0859 0.0370 0.3235 4.7 7eux:A, 7euy:A, 7ev4:A, 4fwd:A, 4fwg:A, 4fwh:A
41 8k8y:A 719 68 0.0859 0.0306 0.3235 4.7 8k8y:G, 8k8y:F, 8k8y:E, 8k8y:D, 8k8y:C, 8k8y:B, 8k8z:A, 8k8z:F, 8k8z:E, 8k8z:D, 8k8z:C, 8k8z:B, 8k90:B, 8k90:C, 8k90:D, 8k91:A, 8k91:B, 8k91:C, 8k91:D, 8k91:E, 8k91:F, 8k91:G, 8k92:A, 8k92:F, 8k92:E, 8k92:D, 8k92:C, 8k92:B, 8k93:B, 8k93:C, 8k93:D, 8k93:E, 8k94:B, 8k94:C, 8k94:D, 8k95:A, 8k95:B, 8k95:C, 8k95:D, 8k95:E, 8k96:B, 8k96:A, 8k96:G, 8k96:F, 8k96:E, 8k96:D, 8k96:C, 8k97:A, 8k97:F, 8k97:E, 8k97:D, 8k97:C, 8k97:B
42 2r65:A 249 57 0.0742 0.0763 0.3333 5.1 2r65:B, 2r65:C, 2r65:D, 2r65:E
43 7mhs:E 489 126 0.1523 0.0798 0.3095 6.2
44 7t55:A 715 44 0.0586 0.0210 0.3409 6.4 4s0f:A, 4s0f:B, 7s5j:A, 7t54:A, 7t54:B, 7t55:B, 7t56:A, 7t56:B, 7t57:A, 7t57:B, 6v9z:A, 6v9z:B
45 8vpo:A 448 49 0.0586 0.0335 0.3061 7.9
46 8xoo:O 572 185 0.1680 0.0752 0.2324 8.2

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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