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BioLiP
>protein
EYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRIYI

The query sequence (length=60) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8gui:L 73 60 1.0000 0.8219 1.0000 2.75e-40 8guj:L, 8iej:A
2 8gui:K 72 60 0.8833 0.7361 0.8833 1.52e-35 8guj:K, 8iej:M, 5trb:A
3 4r7e:A 69 59 0.3500 0.3043 0.3559 3.47e-10 8ieg:A, 8ieg:B, 8t3t:K, 8t3t:L, 8t3w:K, 8t3w:L, 8t3y:K, 8t3y:L
4 6yxe:A 89 48 0.2667 0.1798 0.3333 3.18e-04 6yxe:B
5 4r8p:L 254 44 0.2500 0.0591 0.3409 4.33e-04 2ckl:B, 8grm:N, 2h0d:B, 7nd1:A, 8pp7:L, 8pp7:N, 4r8p:N, 3rpg:C, 4s3o:B, 4s3o:E
6 7t92:C 317 39 0.2500 0.0473 0.3846 4.90e-04
7 1z6u:A 115 58 0.3000 0.1565 0.3103 0.002 1z6u:B
8 7oik:A 4426 40 0.2333 0.0032 0.3500 0.003 7oim:A, 6tax:A, 6tay:A
9 2ecw:A 85 53 0.2833 0.2000 0.3208 0.006
10 7jzv:A 253 43 0.2667 0.0632 0.3721 0.007 8grq:K, 1jm7:A, 7lyb:M
11 5vo0:D 159 49 0.2667 0.1006 0.3265 0.007 5vnz:A, 5vnz:D, 5vo0:A
12 6wi7:A 206 44 0.2500 0.0728 0.3409 0.009 2ckl:A, 8grm:M, 2h0d:A, 7nd1:H, 8pp7:K, 8pp7:M, 4r8p:K, 4r8p:M, 3rpg:B, 6wi8:A, 6wi8:B
13 6wi7:A 206 49 0.2667 0.0777 0.3265 2.6 2ckl:A, 8grm:M, 2h0d:A, 7nd1:H, 8pp7:K, 8pp7:M, 4r8p:K, 4r8p:M, 3rpg:B, 6wi8:A, 6wi8:B
14 5ait:A 129 42 0.2667 0.1240 0.3810 0.009 5aiu:A, 4ap4:A, 3ng2:A, 3ng2:B, 4ppe:A, 4ppe:B, 2xeu:A
15 5ait:A 129 42 0.2667 0.1240 0.3810 0.009 5aiu:A, 4ap4:A, 3ng2:A, 3ng2:B, 4ppe:A, 4ppe:B, 2xeu:A
16 5j3x:B 389 39 0.2000 0.0308 0.3077 0.014 4a4b:A, 4a4c:A, 1b47:A, 1b47:B, 1b47:C, 3bum:B, 3bun:B, 3buo:B, 3buo:D, 3buw:B, 3buw:D, 3bux:B, 3bux:D, 2cbl:A, 1fbv:A, 4gpl:B, 5hkx:A, 5hky:A, 5hkz:A, 5hl0:A, 5j3x:A, 5j3x:C, 5j3x:D, 5j3x:E, 5j3x:F, 2k4d:A, 5o76:A, 5o76:C, 3ob1:B, 3ob2:B, 3plf:B, 3plf:D, 7siy:A, 6xar:A, 6xar:B, 2y1m:A, 2y1m:B, 2y1m:C, 2y1m:D, 2y1m:E, 2y1m:F, 2y1n:A, 2y1n:C, 1yvh:A
17 3zni:A 390 39 0.2000 0.0308 0.3077 0.022 4a49:A, 5axi:B, 5axi:A, 5axi:C, 9fqh:A, 9fqi:A, 9fqj:A, 9fqj:B, 8gcy:A, 2ldr:A, 3pfv:A, 3pfv:B, 8qng:A, 8qnh:A, 8qni:A, 8qtg:A, 8qth:A, 8qtj:A, 8qtk:A, 8vw4:A, 8vw4:B, 8vw5:A, 8vw5:B, 3zni:E, 3zni:I, 3zni:M
18 2djb:A 72 50 0.2833 0.2361 0.3400 0.033
19 7r76:A 1834 35 0.2500 0.0082 0.4286 0.034 7r77:A
20 5eya:G 86 50 0.2667 0.1860 0.3200 0.043 5eya:F, 5fer:A, 5fer:D
21 2eci:A 86 49 0.2500 0.1744 0.3061 0.065
22 6l8n:A 810 48 0.2500 0.0185 0.3125 0.082
23 7r78:A 1880 43 0.2833 0.0090 0.3953 0.092
24 5olm:B 132 45 0.2500 0.1136 0.3333 0.093 5jpx:A, 5olm:A
25 7t02:A 1752 43 0.2833 0.0097 0.3953 0.12
26 3hcs:A 157 49 0.2500 0.0955 0.3061 0.16 3hcs:B, 3hct:A, 3hcu:A, 3hcu:C, 8hz2:A, 8hz2:B, 2jmd:A, 7l3l:B, 7l3l:D
27 7bbd:B 160 46 0.2500 0.0938 0.3261 0.19 8a58:C, 8a58:D, 8c07:I, 8f1f:C, 8f1f:c, 6fga:A, 6fga:B, 6fga:C, 6fga:D, 6fga:E, 6fga:F, 6fga:G, 6fga:H, 5m93:B, 5m93:C, 7nbb:C, 5o44:E, 6s53:B, 6s53:A, 6s53:H, 6s53:G, 3zlz:B
28 2ecj:A 58 47 0.2333 0.2414 0.2979 0.24
29 6y2x:A 231 35 0.2000 0.0519 0.3429 0.25 6ir0:A, 6y22:A, 6y3j:A
30 7xyz:B 456 50 0.2833 0.0373 0.3400 0.26 7xv2:A, 7xyy:A, 7xyy:B, 7xyz:A, 7xyz:C, 7xyz:D, 7xz0:A, 7xz0:B, 7xz1:A, 7xz1:B, 7xz2:A, 7xz2:B, 7xz2:C, 7xz2:D
31 2yur:A 74 44 0.2500 0.2027 0.3409 0.55
32 5dka:A 96 35 0.2000 0.1250 0.3429 0.57 5dka:B, 8gbq:B, 8gcb:B
33 5zi6:A 55 34 0.2333 0.2545 0.4118 0.64 5zi6:B, 5zi6:C, 5zi6:D, 5zi6:E, 5zi6:F, 5zi6:G, 5zi6:H
34 4s3o:C 95 43 0.1833 0.1158 0.2558 0.87 4s3o:F
35 2ea6:A 69 28 0.2000 0.1739 0.4286 0.93
36 2ecn:A 70 36 0.2167 0.1857 0.3611 1.1 5xek:A
37 2ecv:A 85 59 0.2167 0.1529 0.2203 1.1
38 7enc:0 306 53 0.2333 0.0458 0.2642 1.2 1g25:A, 8gxq:HD, 8gxs:HD, 6nmi:H, 7nvw:3, 7nvx:3, 7nvy:3, 7nvz:3, 8wak:0, 8wal:0, 8wan:0, 8wao:0, 8wap:0, 8waq:0, 8war:0, 8was:0
39 2ysl:A 73 51 0.2333 0.1918 0.2745 1.4 2ysj:A
40 3ztg:A 92 44 0.2500 0.1630 0.3409 1.4 3ztg:B
41 7lbm:d 275 53 0.2333 0.0509 0.2642 1.6 8byq:7
42 7zj3:A 86 46 0.2500 0.1744 0.3261 1.7 8a38:A, 8a38:B, 8a38:C, 8ams:C, 8ams:D, 7zj3:D, 7zj3:G, 7zj3:J
43 8hfc:A 276 60 0.2833 0.0616 0.2833 1.8
44 1bor:A 56 40 0.2167 0.2321 0.3250 1.8 2mwx:A, 5yuf:A, 5yuf:B, 5yuf:C, 5yuf:D
45 7yui:B 232 37 0.2167 0.0560 0.3514 1.8 3b08:K, 3b08:B, 3b08:E, 3b08:H, 3b0a:B
46 8eaz:A 254 24 0.1667 0.0394 0.4167 1.9 8bvl:A, 8bvl:B, 8eaz:B, 7yuj:A, 7yuj:B
47 4auq:B 57 44 0.2500 0.2632 0.3409 2.3 4auq:E
48 6q63:A 751 28 0.2167 0.0173 0.4643 2.5 6q63:B, 6q63:C
49 7nvr:3 214 53 0.2333 0.0654 0.2642 2.5
50 7egb:0 236 53 0.2333 0.0593 0.2642 2.6 7egc:0
51 1rmd:A 116 42 0.2167 0.1121 0.3095 2.8
52 3lrq:D 84 46 0.2167 0.1548 0.2826 3.0 3lrq:A, 3lrq:B, 3lrq:C
53 4tkp:B 63 54 0.2167 0.2063 0.2407 3.1
54 1chc:A 68 46 0.2000 0.1765 0.2609 3.6
55 5uqd:A 324 27 0.1667 0.0309 0.3704 4.3
56 6a3z:A 56 24 0.1667 0.1786 0.4167 5.1
57 5gm6:f 102 39 0.1833 0.1078 0.2821 5.2 6bk8:R, 5gmk:I, 6j6g:I, 6j6h:I, 6j6n:I, 6j6q:I, 5wsg:I, 5y88:K, 5ylz:K
58 3vk6:A 96 28 0.1500 0.0938 0.3214 5.2 2mq1:A
59 4wnx:A 429 24 0.2000 0.0280 0.5000 5.8
60 5jw7:B 61 41 0.1667 0.1639 0.2439 5.9
61 4orh:H 142 53 0.2333 0.0986 0.2642 6.1 4ayc:A, 4ayc:B, 4orh:C, 4orh:G, 4orh:K, 4orh:L, 4whv:C, 4whv:D, 4whv:I, 4whv:J
62 3fl2:A 116 44 0.2167 0.1121 0.2955 7.0
63 1v87:A 114 36 0.2000 0.1053 0.3333 7.3
64 2d8t:A 71 23 0.1667 0.1408 0.4348 7.4
65 6u75:A 261 45 0.2333 0.0536 0.3111 8.3 6u75:B
66 3org:A 534 20 0.1667 0.0187 0.5000 9.4 3org:B, 3org:C, 3org:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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