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BioLiP
>protein
EYAVEKIIDRRVRKGMVEYYLKWKGYPETENTWEPENNLDCQDLIQQYEASR

The query sequence (length=52) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 6asz:A 53 52 0.9808 0.9623 0.9808 8.35e-34 6at0:A, 1kna:A, 1kne:A, 6mha:A, 1q3l:A
2 3tzd:A 58 52 0.5769 0.5172 0.5769 2.29e-19 3dm1:A, 3dm1:C, 3dm1:G, 3dm1:E, 2l11:A
3 2rvn:A 83 47 0.5769 0.3614 0.6383 8.15e-19
4 8uxq:A 170 45 0.5769 0.1765 0.6667 1.34e-17 3fdt:A
5 8uxq:A 170 44 0.2308 0.0706 0.2727 9.4 3fdt:A
6 1guw:A 73 45 0.5385 0.3836 0.6222 2.15e-16 6d07:A, 6d07:B, 6d08:A, 6d08:B
7 1pfb:A 55 50 0.5385 0.5091 0.5600 1.98e-13 1pdq:A
8 3gv6:A 56 48 0.4615 0.4286 0.5000 2.71e-12 3i90:A, 3i90:B
9 5ejw:A 80 48 0.4808 0.3125 0.5208 3.87e-12 5epj:A, 2kvm:A, 2l12:A, 2l1b:A, 4mn3:A, 8sii:A, 8sii:B, 6v2r:A, 4x3k:A, 4x3k:B, 4x3s:B, 4x3s:A, 4x3t:A, 4x3t:B, 4x3t:C, 4x3t:D, 4x3t:E, 4x3t:F, 4x3u:A, 4x3u:B
10 7vyw:A 47 40 0.4423 0.4894 0.5750 6.80e-12
11 5eq0:A 55 48 0.4038 0.3818 0.4375 2.01e-11 3i91:A
12 6v2d:G 64 51 0.4615 0.3750 0.4706 2.12e-11 5jjz:A, 7slw:A, 7slw:B, 7slw:C, 7slw:D, 7slw:E, 7slw:F, 8sp6:A, 8sp6:B, 8sp6:C, 8sp6:D, 8sp6:E, 8sp6:F, 6v2d:I, 6v2d:K, 6v2d:A, 6v2d:C, 6v2d:E, 6v2h:A, 6v2h:C, 6v2h:E, 6v2h:G, 6v2h:I, 6v2h:K, 6v3n:A, 6v3n:B, 6v8w:A, 6v8w:B, 6v8w:C, 6v8w:D, 6v8w:E, 6v8w:F, 6v8w:G, 6v8w:H, 6v8w:I, 6v8w:J, 6v8w:K, 6v8w:L, 6v8w:M, 6v8w:N, 6v8w:O, 6v8w:P, 6v8w:Q, 6v8w:R, 6v8w:S, 6v8w:T, 6v8w:U, 6v8w:V, 6v8w:W, 6v8w:X, 6v8w:Y, 6v8w:Z
13 4u68:A 64 51 0.4231 0.3438 0.4314 1.46e-10 4quf:A, 4quf:B, 4quf:C, 4quf:D, 4quf:E, 4quf:F, 4u68:B, 4u68:C
14 5epl:B 58 45 0.4808 0.4310 0.5556 1.73e-10 5epl:A
15 7vrf:A 61 51 0.4808 0.4098 0.4902 2.33e-10 7vrf:B
16 5epk:A 54 48 0.3654 0.3519 0.3958 5.41e-10 3h91:A, 3h91:B
17 7n27:A 57 49 0.4231 0.3860 0.4490 8.87e-10 7n27:D, 7n27:B, 7n27:C, 7n27:E, 7n27:F
18 3qo2:A 61 48 0.3846 0.3279 0.4167 1.52e-09 7m5u:A, 3qo2:D, 3qo2:B, 3qo2:C, 3r93:A, 3r93:D, 3r93:B, 3r93:C, 3svm:A, 6v2s:A, 6v2s:B
19 6v41:AAA 61 50 0.3846 0.3279 0.4000 1.69e-08
20 2rsn:A 75 39 0.4423 0.3067 0.5897 2.43e-08 3g7l:A
21 4fsx:A 680 53 0.3462 0.0265 0.3396 0.001 4fsx:B, 4ft2:B, 4ft2:A
22 7ubu:A 708 53 0.3462 0.0254 0.3396 0.001 4ft4:A, 4ft4:B
23 2b2w:A 177 30 0.2500 0.0734 0.4333 0.003 5afw:A, 2b2t:A, 2b2u:A, 2b2v:A, 4nw2:A, 4nw2:C, 4o42:A
24 2b2w:A 177 26 0.1923 0.0565 0.3846 0.27 5afw:A, 2b2t:A, 2b2u:A, 2b2v:A, 4nw2:A, 4nw2:C, 4o42:A
25 6s47:Bi 952 56 0.3654 0.0200 0.3393 0.005
26 5e4w:C 105 44 0.3462 0.1714 0.4091 0.015 5e4w:D, 5e4x:A
27 6ryr:W 708 35 0.2308 0.0169 0.3429 0.034 2l75:A, 1mm2:A, 6q3m:D, 6ryu:W, 6ryu:V
28 6q3m:C 219 35 0.2308 0.0548 0.3429 0.063 6q3m:A, 6q3m:B
29 6guu:B 204 32 0.2308 0.0588 0.3750 0.33 6guu:A
30 6hw2:B 69 44 0.2115 0.1594 0.2500 0.58 8jzw:C, 8jzw:D, 8jzw:A, 8jzw:B, 5t1i:A, 5t1i:B
31 3q6s:B 67 44 0.2115 0.1642 0.2500 2.2 3q6s:A, 3q6s:C, 3q6s:D, 5t1g:A
32 2bba:A 185 30 0.2115 0.0595 0.3667 4.2
33 5yq0:C 304 32 0.2115 0.0362 0.3438 5.2 5yq0:G
34 1bso:A 162 21 0.1923 0.0617 0.4762 8.6 1b0o:A, 7bf7:AAA, 7bf8:BBB, 7bf9:AAA, 4dq3:A, 4dq4:A, 7er3:A, 7er3:B, 7er3:C, 7er3:D, 6ge7:A, 6gf9:A, 6gfs:A, 6ghh:A, 2gj5:A, 4gny:A, 1gx8:A, 1gx9:A, 1gxa:A, 4ib6:A, 4ib7:A, 4ib8:A, 4ib9:A, 4iba:A, 4kii:A, 7kot:A, 7kp5:AA1, 7kp5:BA1, 5lke:A, 5lkf:A, 4lzu:A, 4lzv:A, 6nkq:B, 3nq9:A, 5nuj:A, 5nuk:A, 5num:A, 5nun:A, 4omw:C, 4omw:D, 4omx:A, 7q19:AAA, 7q2n:AAA, 7q2n:BBB, 7q2o:AAA, 7q2o:BBB, 7q2p:AAA, 7q2p:BBB, 6t42:AAA, 6t44:AAA, 6t44:BBB, 3uew:A, 7wql:A, 7wql:B, 4y0p:A, 4y0q:A, 4y0r:A, 4y0s:A, 5y5c:A, 5y5c:B, 7z9z:AAA, 7za0:AAA, 7zcd:AAA
35 2nv9:B 372 21 0.1538 0.0215 0.3810 9.1 2nv9:A, 2nv9:C, 2nv9:D, 2nv9:E, 2nv9:F, 2nv9:G, 2nv9:H, 2nva:A, 2nva:B, 2nva:C, 2nva:D, 2nva:E, 2nva:F, 2nva:G, 2nva:H

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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