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BioLiP
>protein
EWEAIEKKIAANESKDQAIEKKIQAIEKKIEAIEHG

The query sequence (length=36) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7p3h:A 36 36 1.0000 1.0000 1.0000 5.62e-17
2 6egl:A 36 36 0.7500 0.7500 0.7500 1.73e-13 6egm:A, 6egn:C, 6egn:B, 6ego:A, 6egp:A, 5kb0:A, 5kb1:A, 5kb2:A, 6mcd:A, 7n2y:A, 7n2z:A
3 5uxt:A 33 28 0.4167 0.4545 0.5357 8.20e-04 5uxt:C
4 1g6u:A 48 25 0.3333 0.2500 0.4800 0.097 1g6u:B
5 1g6u:A 48 19 0.3056 0.2292 0.5789 1.7 1g6u:B
6 2lxy:A 67 23 0.2500 0.1343 0.3913 3.3 8vsw:A
7 4g1e:A 964 25 0.2500 0.0093 0.3600 4.6 5ffg:A, 5ffo:A, 5ffo:E, 4g1m:A, 3ije:A, 1jv2:A, 1l5g:A, 1m1x:A, 6mk0:A, 4mmx:A, 4mmy:A, 4mmz:A, 6msl:A, 6msu:A, 6naj:A, 5nem:A, 5ner:A, 5net:A, 4o02:A, 6om1:A, 6om1:C, 6om1:E, 6om1:G, 6om2:A, 6om2:C, 8tcf:A, 8tcg:A, 1u8c:A, 6uja:A, 6ujb:A, 6ujc:A, 4um8:C, 4um8:A, 4um9:A, 4um9:C, 8vs6:A, 8vsd:A, 7y1t:A
8 4etp:B 287 25 0.3611 0.0453 0.5200 6.5

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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