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BioLiP
>protein
ETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKCK

The query sequence (length=73) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2p6a:C 282 73 0.9178 0.2376 0.9178 4.78e-38 1lr7:A, 1lr8:A
2 2p6a:C 282 74 0.3836 0.0993 0.3784 5.88e-06 1lr7:A, 1lr8:A
3 2p6a:C 282 73 0.3425 0.0887 0.3425 2.84e-05 1lr7:A, 1lr8:A
4 7kbu:A 221 80 0.3425 0.1131 0.3125 5.65e-06 7kbu:B
5 1bmo:A 233 79 0.3562 0.1116 0.3291 4.91e-05 1bmo:B, 1nub:A, 1nub:B, 1sra:A, 2v53:A
6 3poy:A 1005 45 0.1918 0.0139 0.3111 1.9 3asi:A, 3b3q:E, 3b3q:F, 3biw:E, 3biw:F, 3biw:G, 3bod:A, 2h0b:A, 2h0b:B, 2h0b:C, 2h0b:D, 2r16:A, 2r1d:H, 2r1d:B, 2r1d:D, 2r1d:I, 3vkf:C, 3vkf:D, 2wqz:C, 2wqz:D, 2xb6:C, 2xb6:D, 5z8y:B, 5z8y:D, 5z8y:F, 5z8y:H
7 4adg:C 432 51 0.1781 0.0301 0.2549 5.5 4adg:A, 4adg:B, 4adj:A, 4adj:B, 4adj:C, 4b3v:A, 4b3v:B, 4b3v:C
8 8fkp:NE 156 38 0.1918 0.0897 0.3684 7.6 8fkq:NE, 8fkr:NE, 8fks:NE

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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