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BioLiP
>protein
ESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFL
PEAKR

The query sequence (length=85) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 1e91:A 85 85 1.0000 1.0000 1.0000 3.08e-59 1pd7:A
2 1g1e:B 89 82 0.6118 0.5843 0.6341 9.87e-32 1s5q:B, 1s5r:B
3 6xdj:A 441 77 0.4941 0.0952 0.5455 1.93e-20 6xaw:A, 6xdj:B
4 5y95:A 80 82 0.2941 0.3125 0.3049 4.08e-09
5 2czy:A 77 81 0.2941 0.3247 0.3086 1.76e-08
6 7wjl:A 453 48 0.1882 0.0353 0.3333 1.1
7 2i13:A 151 59 0.1765 0.0993 0.2542 1.2
8 2i13:B 144 59 0.1765 0.1042 0.2542 1.4
9 2i13:B 144 45 0.1412 0.0833 0.2667 7.2
10 7xhn:K 230 63 0.2353 0.0870 0.3175 2.0 7xho:K
11 7sss:F 173 40 0.1529 0.0751 0.3250 4.4 7sss:E, 7sss:H, 7sss:G
12 8qoy:A 1036 20 0.1059 0.0087 0.4500 5.7
13 8a3y:A 1426 49 0.1647 0.0098 0.2857 6.3 8oeu:A, 8oev:A, 8oew:A, 8of0:A, 7okx:A, 7oky:A, 7ol0:A, 7pks:A, 8rbx:A, 6ted:A, 8uhg:A, 8ui0:A, 7unc:A, 7und:A
14 6o9l:A 1476 49 0.1647 0.0095 0.2857 7.1 8a40:A, 8bvw:A, 8byq:A, 8bz1:A, 7edx:o, 7eg7:o, 7eg8:o, 7eg9:o, 7ega:o, 7egb:o, 7egc:o, 6exv:A, 5flm:A, 5iy6:A, 5iy7:A, 5iy8:A, 5iy9:A, 5iya:A, 5iyb:A, 5iyc:A, 5iyd:A, 7nvr:A, 7nvs:A, 7nvt:A, 7nvu:A, 7nvy:A, 7nvz:A, 7nw0:A, 8s5n:A, 8wak:o, 8wal:o, 8wan:o, 8wao:o, 8wap:o, 8waq:o, 8war:o, 8was:o, 8wat:o, 8wau:o, 8wav:o, 8waw:o, 8wax:o, 8way:o, 8waz:o, 8wb0:o, 6xre:A, 7zwd:A, 7zx7:A, 7zx8:A
15 7ena:PA 1475 49 0.1647 0.0095 0.2857 7.3 7b0y:A, 8b3d:A, 8b3f:A, 7enc:PA, 6gmh:A, 6gml:A, 8gxq:PA, 8gxs:PA, 7lbm:A, 5oik:A, 7oo3:A, 7oob:A, 7oop:A, 7opc:A, 7opd:A, 8p4a:A, 8p4b:A, 8p4c:A, 8p4d:A, 8p4e:A, 8p4f:A, 8s51:A, 8s52:A, 8s54:A, 8s55:A, 8uha:A, 8uhd:A, 8uis:A, 8w8e:A, 8w8f:A, 7ycx:1
16 1s49:A 588 49 0.2000 0.0289 0.3469 8.2
17 7d5c:A 919 30 0.1412 0.0131 0.4000 8.8
18 3zq4:A 550 26 0.1059 0.0164 0.3462 9.3 3zq4:C, 3zq4:D, 3zq4:E
19 2epa:A 72 36 0.0941 0.1111 0.2222 9.4

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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