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BioLiP
>protein
EQVFAAECILSKRLRKGKLEYLVKWRGWSSKHNSWEPEENILDPRLLLAFQKKE

The query sequence (length=54) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5epk:A 54 54 1.0000 1.0000 1.0000 1.50e-34 3h91:A, 3h91:B
2 5epl:B 58 54 0.7407 0.6897 0.7407 3.88e-26 5epl:A
3 5eq0:A 55 54 0.6667 0.6545 0.6667 5.52e-24 3i91:A
4 3gv6:A 56 54 0.6481 0.6250 0.6481 1.49e-23 3i90:A, 3i90:B
5 5ejw:A 80 54 0.6667 0.4500 0.6667 1.57e-23 5epj:A, 2kvm:A, 2l12:A, 2l1b:A, 4mn3:A, 8sii:A, 8sii:B, 6v2r:A, 4x3k:A, 4x3k:B, 4x3s:B, 4x3s:A, 4x3t:A, 4x3t:B, 4x3t:C, 4x3t:D, 4x3t:E, 4x3t:F, 4x3u:A, 4x3u:B
6 1pfb:A 55 50 0.5000 0.4909 0.5400 6.12e-17 1pdq:A
7 2rvn:A 83 50 0.4444 0.2892 0.4800 7.98e-14
8 3tzd:A 58 47 0.4074 0.3793 0.4681 2.01e-12 3dm1:A, 3dm1:C, 3dm1:G, 3dm1:E, 2l11:A
9 8uxq:A 170 48 0.4444 0.1412 0.5000 2.52e-12 3fdt:A
10 1guw:A 73 41 0.4074 0.3014 0.5366 1.94e-11 6d07:A, 6d07:B, 6d08:A, 6d08:B
11 7vyw:A 47 38 0.3889 0.4468 0.5526 4.23e-11
12 6asz:A 53 48 0.3704 0.3774 0.4167 2.05e-10 6at0:A, 1kna:A, 1kne:A, 6mha:A, 1q3l:A
13 3qo2:A 61 54 0.4259 0.3770 0.4259 3.40e-09 7m5u:A, 3qo2:D, 3qo2:B, 3qo2:C, 3r93:A, 3r93:D, 3r93:B, 3r93:C, 3svm:A, 6v2s:A, 6v2s:B
14 7n27:A 57 44 0.3519 0.3333 0.4318 9.10e-09 7n27:D, 7n27:B, 7n27:C, 7n27:E, 7n27:F
15 6v41:AAA 61 43 0.3148 0.2787 0.3953 1.29e-07
16 4u68:A 64 38 0.3148 0.2656 0.4474 3.64e-07 4quf:A, 4quf:B, 4quf:C, 4quf:D, 4quf:E, 4quf:F, 4u68:B, 4u68:C
17 6v2d:G 64 42 0.3333 0.2812 0.4286 4.78e-07 5jjz:A, 7slw:A, 7slw:B, 7slw:C, 7slw:D, 7slw:E, 7slw:F, 8sp6:A, 8sp6:B, 8sp6:C, 8sp6:D, 8sp6:E, 8sp6:F, 6v2d:I, 6v2d:K, 6v2d:A, 6v2d:C, 6v2d:E, 6v2h:A, 6v2h:C, 6v2h:E, 6v2h:G, 6v2h:I, 6v2h:K, 6v3n:A, 6v3n:B, 6v8w:A, 6v8w:B, 6v8w:C, 6v8w:D, 6v8w:E, 6v8w:F, 6v8w:G, 6v8w:H, 6v8w:I, 6v8w:J, 6v8w:K, 6v8w:L, 6v8w:M, 6v8w:N, 6v8w:O, 6v8w:P, 6v8w:Q, 6v8w:R, 6v8w:S, 6v8w:T, 6v8w:U, 6v8w:V, 6v8w:W, 6v8w:X, 6v8w:Y, 6v8w:Z
18 2rsn:A 75 42 0.3148 0.2267 0.4048 1.94e-06 3g7l:A
19 2b2w:A 177 50 0.3519 0.1073 0.3800 4.61e-06 5afw:A, 2b2t:A, 2b2u:A, 2b2v:A, 4nw2:A, 4nw2:C, 4o42:A
20 7vrf:A 61 46 0.3148 0.2787 0.3696 1.57e-05 7vrf:B
21 5e4w:C 105 52 0.3889 0.2000 0.4038 4.53e-05 5e4w:D, 5e4x:A
22 6s47:Bi 952 39 0.2593 0.0147 0.3590 0.002
23 9gd1:W 849 44 0.2593 0.0165 0.3182 0.040
24 9gd1:W 849 40 0.2778 0.0177 0.3750 0.30
25 4iup:B 134 59 0.3519 0.1418 0.3220 0.051 4iup:A, 4iuq:B, 4iuq:A, 4iur:B, 4iur:A, 4iut:B, 4iut:A, 4iuu:B, 4iuu:A, 4iuv:A, 4iuv:B
26 4fsx:A 680 29 0.1667 0.0132 0.3103 0.056 4fsx:B, 4ft2:B, 4ft2:A
27 7ubu:A 708 29 0.1667 0.0127 0.3103 0.062 4ft4:A, 4ft4:B
28 6ryr:W 708 25 0.2037 0.0155 0.4400 0.14 2l75:A, 1mm2:A, 6q3m:D, 6ryu:W, 6ryu:V
29 6g0l:M 855 26 0.2222 0.0140 0.4615 0.17 7nkx:W, 5o9g:W
30 6g0l:M 855 40 0.2778 0.0175 0.3750 0.30 7nkx:W, 5o9g:W
31 6ftx:W 878 26 0.2222 0.0137 0.4615 0.17 6g0l:W, 5j70:A, 5j70:B, 3mwy:W, 3ted:A
32 6ftx:W 878 39 0.2778 0.0171 0.3846 0.31 6g0l:W, 5j70:A, 5j70:B, 3mwy:W, 3ted:A
33 7tn2:W 895 26 0.2222 0.0134 0.4615 0.18 9gd2:W, 9gd3:W
34 7tn2:W 895 39 0.2778 0.0168 0.3846 0.32 9gd2:W, 9gd3:W
35 6q3m:C 219 25 0.2037 0.0502 0.4400 0.37 6q3m:A, 6q3m:B
36 5wyr:B 248 40 0.2222 0.0484 0.3000 1.9 6afk:A, 6afk:B, 6jki:A, 6jki:B, 6joe:A, 6joe:B, 5wyq:A, 5wyq:B, 5wyr:A, 5zhm:A, 5zhm:B, 5zhn:A, 5zhn:B
37 4r4x:A 544 44 0.2778 0.0276 0.3409 2.4
38 8snl:A 656 27 0.1852 0.0152 0.3704 2.4 2a8h:A, 2a8h:B, 3b92:A, 1bkc:A, 1bkc:C, 1bkc:E, 1bkc:I, 3cki:A, 2ddf:A, 2ddf:B, 3e8r:A, 3e8r:B, 3edz:A, 3edz:B, 3ewj:A, 3ewj:B, 2fv5:A, 2fv5:B, 2fv9:A, 2fv9:B, 3g42:A, 3g42:B, 3g42:C, 3g42:D, 2i47:A, 2i47:B, 2i47:C, 2i47:D, 3kmc:A, 3kmc:B, 3kme:A, 3kme:B, 3l0t:A, 3l0t:B, 3l0v:A, 3l0v:B, 3le9:A, 3le9:B, 3lea:A, 3lea:B, 3lgp:A, 3lgp:B, 3o64:A, 3o64:B, 2oi0:A, 8snm:B, 8snn:A, 8sno:A, 1zxc:A, 1zxc:B
39 8a22:Xb 244 34 0.2037 0.0451 0.3235 2.5 8apn:Xb, 8apo:Xb
40 3oa6:A 84 23 0.1481 0.0952 0.3478 2.8 3oa6:B
41 7eew:A 610 28 0.2222 0.0197 0.4286 4.0
42 6hw2:B 69 42 0.2037 0.1594 0.2619 4.2 8jzw:C, 8jzw:D, 8jzw:A, 8jzw:B, 5t1i:A, 5t1i:B
43 6guu:B 204 22 0.1481 0.0392 0.3636 6.9 6guu:A
44 5yu6:C 1073 16 0.2037 0.0103 0.6875 7.1 3a6p:A, 3a6p:F, 5yu6:A
45 5e5c:C 479 17 0.1481 0.0167 0.4706 9.2 6ajd:A, 6ajd:B, 7e3u:A, 7e3u:B, 5e5c:A, 6klk:A, 6klk:B, 8wq9:A, 8wq9:B, 5ykd:A, 5ykd:B, 5ykd:C, 5ykd:D
46 8jhe:A 508 20 0.1481 0.0157 0.4000 10.0 8jhe:B, 8jhe:C, 8jhe:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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