BioLiP

>protein
ENYRDIALAFLDESADSGTINAWVNEFAYQGFDPKRIVQLVKERGTAKGRDWKKDVKMMIVLNLVRGNKPEAMMKKMSEK
GASIVANLISVYQLKEGNPGRDTITLSRVSAAFVPWTVQALRVLSESLPVSGTTMDAIAGVTYPRAMMHPSFAGIIDLDL
PNGAGATIADAHGLFMIEFSKTINPSLRTKQANEVAATFEKPNMAAMSGRFFTREDKKKLLIAVGIIDEDLVLASAVVRS
AEKYRAKVG

The query sequence (length=249) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	4csf:K	251	249	1.0000	0.9920	1.0000	0.0	4csf:A, 4csf:B, 4csf:F, 4csf:C, 4csf:D, 4csf:E, 4csf:G, 4csf:H, 4csf:L, 4csf:I, 4csf:J, 4csf:M, 4csf:N, 4csf:R, 4csf:O, 4csf:P, 4csf:Q, 4csf:S, 4csf:T, 4csf:X, 4csf:U, 4csf:V, 4csf:W
2	3ov9:A	245	230	0.4739	0.4816	0.5130	4.82e-83	4h5o:A, 4h5o:B, 4h5o:D, 4h5o:F, 4h5o:G, 4h5o:C, 4h5o:E, 4h5o:H, 4h5o:I, 4h5o:J, 4h5p:A, 4h5p:B, 4h5p:C, 4h5p:D, 4h5q:A, 4h5q:B, 4h5q:C, 3ouo:A, 3ouo:B, 3ouo:C, 3ov9:B, 3ov9:C, 4v9e:AA, 4v9e:AB, 4v9e:AC, 4v9e:AD, 4v9e:AE, 4v9e:AF, 4v9e:AG, 4v9e:AH, 4v9e:AI, 4v9e:AJ, 4v9e:AK, 4v9e:AL, 4v9e:AM, 4v9e:AN, 4v9e:AO, 4v9e:AP, 4v9e:AQ, 4v9e:AR, 4v9e:BA, 4v9e:BB, 4v9e:BC, 4v9e:BD, 4v9e:BE, 4v9e:BF, 4v9e:BG, 4v9e:BH, 4v9e:BI, 4v9e:BJ, 4v9e:BK, 4v9e:BL, 4v9e:BM, 4v9e:BN, 4v9e:BO, 4v9e:BP, 4v9e:BQ, 4v9e:BR
3	4j4v:D	246	244	0.3293	0.3333	0.3361	2.19e-30	4j4v:A, 4j4v:B, 4j4v:C, 4j4v:E
4	1a5o:C	566	96	0.1044	0.0459	0.2708	0.90	1a5n:C, 1ef2:A, 1ejr:C, 1ejs:C, 1ejt:C, 1eju:C, 1ejv:C, 1fwa:C, 1fwb:C, 1fwc:C, 1fwd:C, 1fwe:C, 1fwf:C, 1fwg:C, 1fwh:C, 1fwi:C, 1fwj:C, 2kau:C, 1krb:C, 1krc:C
5	6jdd:A	176	88	0.0924	0.1307	0.2614	1.5
6	6trq:C	336	38	0.0482	0.0357	0.3158	2.6	5bv3:A, 5bv3:C, 6trq:A, 6trq:D
7	4cnj:A	391	68	0.0843	0.0537	0.3088	4.7	4cnj:B, 4cnj:C, 4cnj:D, 4cnk:A, 4cnk:B
8	2vy0:A	264	59	0.0643	0.0606	0.2712	5.3	2vy0:B
9	5ex2:A	267	41	0.0602	0.0562	0.3659	5.8	5ex2:B
10	8a8m:B	298	46	0.0643	0.0537	0.3478	7.6	3fme:A, 8p7j:A, 8p7j:B, 8pm3:A, 8pm3:B, 8pm3:C, 8pm3:D, 3vn9:A
11	4gae:A	416	68	0.0643	0.0385	0.2353	8.3	3au8:A, 3au8:B, 3au9:A, 3au9:B, 3aua:A, 3aua:B, 4gae:B, 5jaz:A, 5jaz:B, 5jbi:A, 5jbi:B, 5jc1:A, 5jc1:B, 5jmp:A, 5jmp:B, 5jmw:A, 5jmw:B, 5jnl:A, 5jnl:B, 8jnv:A, 8jnv:B, 8jnw:A, 8jnw:B, 5jo0:A, 5jo0:B, 4kp7:A, 4kp7:B, 3wqq:A, 3wqq:B, 3wqr:A, 3wqr:B, 3wqs:B, 4y67:A, 4y67:B, 4y6p:A, 4y6p:B, 4y6r:A, 4y6r:B, 4y6s:A, 4y6s:B

[Back]