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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
>protein
ENVTGLFKDCSKVITGLHPTQAPTHLSVDTKFKTEGLCVDIPGIPKDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIR
HVRAWIGFDVEGCHATREAVGTNLPLQLGFSTGVNLVAVPTGYVDTPNNTDFSRVSAKPPPGDQFKHLIPLMYKGLPWNV
VRIKIVQMLSDTLKNLSDRVVFVLWAHGFALTSMKYFVKIGPERTCCLCDRRATCFSTASDTYACWHHSIGFDYVYNPFM
IDVQQWGFTGNLQSNHDLYCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWTIEYPIIGDELKINAACRKVQHMVVKAAL
LADKFPVLHDIGNPKAIKCVPQADVEWKFYDAQPCSDKAYKIEELFYSYATHSDKFTDGVCLFWNCNVDRYPANSIVCRF
DTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFVNLKQLPFFYYSDSPCESYVPLKSATCITRCNLGGAVCRHHANEY
RLYLDAYNMMISAGFSLWVYKQFDTYNLWNTF

The query sequence (length=512) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7egq:X 524 522 0.9980 0.9752 0.9789 0.0 5c8s:B, 5c8s:D, 5c8t:B, 5c8t:D, 5c8u:B, 5c8u:D, 7diy:B, 7egq:K, 7eiz:K, 9fw2:B, 9fz4:B, 9fzk:B, 7mc5:A, 7mc6:A, 7n0b:B, 7n0c:B, 7n0d:B, 7n0d:D, 7n0d:F, 7n0d:H, 5nfy:A, 5nfy:B, 5nfy:C, 5nfy:D
2 5slp:D 465 500 0.8848 0.9742 0.9060 0.0 7qgi:D, 7qif:D, 7r2v:A, 5skw:D, 5skx:D, 5sky:D, 5skz:D, 5sl0:D, 5sl1:D, 5sl2:D, 5sl3:D, 5sl4:D, 5sl5:D, 5sl6:D, 5sl7:D, 5sl8:D, 5sl9:D, 5sla:D, 5slb:D, 5slc:D, 5sld:D, 5sle:D, 5slf:D, 5slg:D, 5slh:D, 5sli:D, 5slj:D, 5slk:D, 5sll:D, 5slm:D, 5sln:D, 5slo:D, 5slq:D, 5slr:D, 5sls:D, 5slt:D, 5slu:D, 5slv:D, 5slw:D, 5slx:D, 5sly:D, 5slz:D, 5sm0:D, 5sm1:D, 5sm2:D, 5sm3:D, 5sm4:D, 5sm5:D, 5sm6:D, 5sm7:D, 5sm8:D, 5sm9:D, 5sma:D, 5smb:D, 5smc:D, 5smd:D, 5sme:D, 5smf:D, 5smg:D, 5smh:D, 5smi:D, 5smk:D
3 7r2v:B 439 489 0.8496 0.9909 0.8896 0.0
4 9feh:A 264 222 0.3594 0.6970 0.8288 1.85e-126 8bwu:A, 8e1f:D, 8frj:A, 8frk:A, 2qb0:C, 7tw7:A, 7tw8:A, 7tw9:A
5 2j68:A 680 46 0.0352 0.0265 0.3913 0.34 2w6d:A, 2w6d:B
6 4f21:E 206 144 0.0781 0.1942 0.2778 1.4
7 6ucq:1Z 204 36 0.0254 0.0637 0.3611 2.7 5a9z:AW, 5aa0:AW, 7azo:L25A, 7azo:L25B, 7azs:L25A, 7azs:L25B, 9b00:2Z, 6b4v:W, 6b4v:AC, 6boh:W, 6boh:BC, 6bok:W, 6bok:ZB, 6buw:RZ, 6buw:YZ, 6bz6:RZ, 6bz6:YZ, 6bz7:RZ, 6bz7:YZ, 6bz8:RZ, 6bz8:YZ, 6c5l:BZ, 6c5l:DZ, 6cae:2Z, 6cfj:2Z, 6cfk:1Z, 6cfk:2Z, 6cfl:1Z, 6cfl:2Z, 8cvj:2Z, 8cvk:2Z, 8cvl:2Z, 5czp:YZ, 5czp:RZ, 6czr:1Z, 6czr:2Z, 5d8b:T, 5d8b:PB, 5dfe:RZ, 5dfe:YZ, 5dox:1Z, 5dox:2Z, 5doy:2Z, 5e7k:H8, 5e81:H8, 5e81:D5, 8ekb:2Z, 5el6:H8, 5el7:H8, 8ev6:2Z, 8ev7:2Z, 5f8k:1Z, 5f8k:2Z, 8fc1:1Z, 8fc1:2Z, 8fc2:1Z, 8fc2:2Z, 8fc3:1Z, 8fc3:2Z, 8fc4:1Z, 8fc4:2Z, 8fc5:1Z, 8fc5:2Z, 8fc6:1Z, 8fc6:2Z, 5fdu:1Z, 5fdu:2Z, 5fdv:1Z, 5fdv:2Z, 1feu:A, 1feu:D, 6fkr:1Z, 6fkr:2Z, 8fom:RZ, 8fom:YZ, 8fon:RZ, 8fon:YZ, 8g29:2Z, 8g2a:2Z, 8g2b:2Z, 8g2c:2Z, 8g2d:2Z, 6gsj:H8, 6gsj:D5, 6gsk:H8, 6gsk:D5, 6gsl:H8, 6gsl:D5, 6gzq:U1, 6gzx:U1, 6gzx:U2, 6gzz:U1, 6gzz:U2, 5hau:1X, 5hau:2X, 5hcp:1Z, 5hcp:2Z, 5hcq:1Z, 5hcq:2Z, 5hcr:1Z, 5hcr:2Z, 5hd1:1Z, 5hd1:2Z, 5ib7:H8, 5ib7:D5, 5ib8:H8, 5ib8:D5, 5ibb:H8, 5ibb:D5, 5imq:r, 5imr:r, 5j30:RZ, 5j30:YZ, 5j3c:RZ, 5j3c:YZ, 5j4b:2Z, 5j4c:2Z, 5j4d:W, 5j4d:BC, 5j8b:Z, 7jql:2Z, 7jqm:2Z, 4l47:RZ, 4l47:YZ, 4l71:RZ, 4l71:YZ, 4lel:RZ, 4lel:YZ, 4lfz:RZ, 4lfz:YZ, 7lh5:BZ, 7lh5:DZ, 4lnt:RZ, 4lnt:YZ, 4lsk:RZ, 4lsk:YZ, 4lt8:RZ, 4lt8:YZ, 7md7:1Z, 7md7:2Z, 6n1d:AL25, 6n1d:BL25, 6n9e:2Z, 6n9f:2Z, 5ndj:H8, 5ndk:H8, 6nd5:2Z, 6nd6:2Z, 6ndk:RZ, 6ndk:YZ, 6nsh:RZ, 6nsh:YZ, 6nta:RZ, 6nta:YZ, 6nuo:RZ, 6nuo:YZ, 6nwy:RZ, 6nwy:YZ, 6o3m:RZ, 6o3m:YZ, 6o97:2Z, 6of1:2Z, 6of6:RZ, 6of6:YZ, 6oj2:RZ, 6oj2:YZ, 6ope:RZ, 6ope:YZ, 6ord:RZ, 6ord:YZ, 6osi:RZ, 6osi:YZ, 5ot7:6, 6otr:RZ, 6otr:YZ, 6oxa:RZ, 6oxa:YZ, 6oxi:RZ, 6oxi:YZ, 4p6f:RZ, 4p6f:YZ, 4p70:RZ, 4p70:YZ, 6q95:V, 6qnq:H8, 6qnq:D5, 6qnr:H8, 6qnr:D5, 7rq8:2Z, 7rq9:2Z, 7rqa:1Z, 7rqa:2Z, 7rqb:1Z, 7rqb:2Z, 7rqc:1Z, 7rqc:2Z, 7rqd:1Z, 7rqd:2Z, 7rqe:1Z, 7rqe:2Z, 8t8b:1Z, 8t8b:2Z, 8t8c:1Z, 8t8c:2Z, 4tua:RZ, 4tua:YZ, 4tub:RZ, 4tub:YZ, 4tuc:RZ, 4tuc:YZ, 4tud:RZ, 4tud:YZ, 4tue:RZ, 4tue:YZ, 7u2h:2Z, 7u2i:2Z, 7u2j:2Z, 6ucq:2Z, 8ud6:2Z, 8ud7:2Z, 8ud8:2Z, 6uo1:2Z, 5uq7:Z, 5uq8:Z, 8uvr:2Z, 8uvs:2Z, 4v4i:T, 4v4j:T, 4v4x:BY, 4v4y:BY, 4v4z:BY, 4v51:BZ, 4v51:DZ, 4v5a:BZ, 4v5a:DZ, 4v5c:BZ, 4v5c:DZ, 4v5d:BZ, 4v5d:DZ, 4v5e:BZ, 4v5e:DZ, 4v5f:BZ, 4v5f:DZ, 4v5g:BZ, 4v5g:DZ, 4v5j:BZ, 4v5j:DZ, 4v5k:BZ, 4v5k:DZ, 4v5l:BZ, 4v5m:BZ, 4v5n:BZ, 4v5p:BZ, 4v5p:DZ, 4v5q:BZ, 4v5q:DZ, 4v5r:BZ, 4v5r:DZ, 4v5s:BZ, 4v5s:DZ, 4v63:BZ, 4v63:DZ, 4v67:BZ, 4v67:DZ, 4v68:BZ, 4v6a:BZ, 4v6a:DZ, 4v6f:AV, 4v6f:DV, 4v6g:BV, 4v6g:DV, 4v7j:AZ, 4v7j:BZ, 4v7k:AZ, 4v7k:BZ, 4v7l:BZ, 4v7l:DZ, 4v7m:BZ, 4v7m:DZ, 4v7p:BV, 4v7p:CV, 4v7w:BZ, 4v7w:DZ, 4v7x:BZ, 4v7x:DZ, 4v7y:BZ, 4v7y:DZ, 4v7z:BZ, 4v7z:DZ, 4v83:BV, 4v83:DV, 4v84:BV, 4v84:DV, 4v87:AV, 4v87:DV, 4v8a:AZ, 4v8a:BZ, 4v8b:BV, 4v8b:DV, 4v8c:AV, 4v8c:BV, 4v8d:BV, 4v8d:DV, 4v8e:AV, 4v8e:CV, 4v8f:AV, 4v8f:DV, 4v8g:BZ, 4v8g:DZ, 4v8h:BZ, 4v8h:DZ, 4v8i:BZ, 4v8i:DZ, 4v8j:BZ, 4v8j:DZ, 4v8n:BZ, 4v8n:DZ, 4v8o:BZ, 4v8q:AZ, 4v8u:BZ, 4v8u:DZ, 4v8x:BZ, 4v8x:DZ, 5v8i:1Z, 5v8i:2Z, 4v90:BZ, 4v95:BZ, 4v95:DZ, 4v97:BZ, 4v97:DZ, 4v9a:BV, 4v9a:DV, 4v9b:BV, 4v9b:DV, 4v9h:BZ, 4v9i:BZ, 4v9i:DZ, 4v9j:BZ, 4v9j:DZ, 4v9k:BZ, 4v9k:DZ, 4v9l:BZ, 4v9l:DZ, 4v9m:BZ, 4v9m:DZ, 4v9n:BZ, 4v9n:DZ, 4v9q:AV, 4v9q:CV, 4v9r:BZ, 4v9r:DZ, 4v9s:BZ, 4v9s:DZ, 5vp2:2Z, 5vpo:RZ, 5vpo:YZ, 5vpp:RZ, 5vpp:YZ, 8vtu:2Z, 8vtv:2Z, 8vtw:1Z, 8vtw:2Z, 8vtx:2Z, 8vty:1Z, 8vty:2Z, 1vvj:RZ, 1vvj:YZ, 1vy4:BZ, 1vy4:DZ, 1vy5:BZ, 1vy5:DZ, 1vy6:BZ, 1vy6:DZ, 1vy7:BZ, 1vy7:DZ, 4w29:BZ, 4w29:DZ, 4w2e:Z, 4w2f:DZ, 4w2g:BZ, 4w2g:DZ, 4w2h:BZ, 4w2h:DZ, 4w2i:BZ, 4w2i:DZ, 4w4g:RZ, 4w4g:YZ, 5w4k:2Z, 5wis:2Z, 5wit:2Z, 4wpo:AZ, 4wpo:CZ, 4wq1:H8, 4wq1:D5, 4wqf:AZ, 4wqf:CZ, 4wqr:H8, 4wqr:D5, 4wqu:AZ, 4wqu:CZ, 4wqy:AZ, 4wqy:CZ, 4wr6:H8, 4wr6:D5, 4wra:H8, 4wro:H8, 4wsd:H8, 4wsd:D5, 4wsm:H8, 4wt1:H8, 4wt1:D5, 4wt8:CZ, 4wt8:DZ, 4wu1:H8, 4wu1:D5, 4wzd:H8, 4wzd:D5, 4wzo:H8, 4xej:AL25, 4xej:BL25, 6xhv:2Z, 6xhw:2Z, 6xhx:1Z, 6xhx:2Z, 6xhy:2Z, 6xqd:2Z, 6xqe:2Z, 4y4o:1Z, 4y4o:2Z, 4y4p:2Z, 4ypb:RZ, 4ypb:YZ, 4yzv:RZ, 4yzv:YZ, 4z3s:2Z, 4z8c:1Z, 4z8c:2Z, 4zer:1Z, 4zer:2Z, 5zlu:s, 4zsn:RZ, 4zsn:YZ
8 5egj:A 167 50 0.0430 0.1317 0.4400 4.4 5egl:A, 5egl:B, 5egl:C
9 1h0a:A 158 83 0.0410 0.1329 0.2530 5.9
10 3i39:X 635 54 0.0352 0.0283 0.3333 8.0 3b51:X, 3b52:X, 3b53:X, 7err:A, 5fle:X, 8omx:X, 8omy:X, 8on0:X, 8on1:X, 8on2:X, 8on3:X, 1su6:A, 1su7:A, 1su8:A, 1suf:A, 4udx:X, 4udy:X, 8x9d:A, 8x9e:A, 8x9f:A, 8x9g:A, 8x9h:A, 7xdm:A, 7xdn:A, 7xdp:A, 2yiv:X, 7zx3:X, 7zx5:X, 7zx6:X, 7zxc:X, 7zxj:X, 7zxl:X, 7zxx:X, 7zy1:X
11 5y5n:A 288 33 0.0273 0.0486 0.4242 8.1 7bot:A, 5fyq:B, 4rmi:A, 8tgp:A, 4y6l:A, 4y6l:B, 4y6o:A, 4y6o:B, 4y6q:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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