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BioLiP
>protein
ENLYFQSNAMMNQDIEKVLISEEQIQEKVLELGAIIAEDYKNTVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAVSSYG
HSTVSTGEVKILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPTGRKVDLKADYVGFTVPHE
FVVGYGLDYKEQYRNLPYVGVLKPSVYS

The query sequence (length=188) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3kb8:A 201 188 1.0000 0.9353 1.0000 6.12e-136 6d9r:A, 6d9r:B, 6d9s:A, 6d9s:B, 3h83:A, 3h83:B, 3kb8:B
2 4pfq:C 184 176 0.5053 0.5163 0.5398 7.56e-65 4pfq:A, 4pfq:B, 4pfq:D, 4pfq:E, 4pfq:F, 4pfq:G, 4pfq:H
3 2geb:A 184 175 0.5426 0.5543 0.5829 2.26e-62 1r3u:A, 1r3u:B, 1yfz:A, 1yfz:B
4 4qyi:B 171 167 0.4628 0.5088 0.5210 2.35e-59 4qyi:A, 4qyi:C, 4qyi:D, 4qyi:E
5 5knx:B 176 166 0.4309 0.4602 0.4880 2.66e-54 1g9s:A, 1g9s:B, 1g9t:A, 1g9t:B, 1grv:B, 1grv:A, 1j7j:A, 1j7j:B, 5knr:A, 5knr:B, 5kns:A, 5kns:B, 5knt:A, 5knt:B, 5knu:A, 5knu:B, 5knv:A, 5knv:B, 5knx:A
6 5kny:B 187 181 0.4787 0.4813 0.4972 6.11e-48 5knp:A, 5knp:B, 5knp:C, 5knp:D, 5knq:A, 5knq:B, 5knq:C, 5knq:D, 5kny:A, 5kny:C, 5kny:D, 4rht:A, 4rht:B, 4rht:C, 4rht:D, 4rhu:A, 4rhu:B, 4rhu:C, 4rhu:D, 4rhu:E, 4rhu:F, 4rhx:A, 4rhx:B, 4rhx:C, 4rhx:D, 4rhy:A, 4rhy:B, 4rhy:C, 4rhy:D
7 3acc:A 166 167 0.4043 0.4578 0.4551 4.86e-45 3acd:A
8 1hgx:A 164 171 0.3989 0.4573 0.4386 1.97e-44
9 1p17:B 204 183 0.4202 0.3873 0.4317 1.20e-42 1i0i:A, 1i0i:B, 1i0l:A, 1i0l:B, 1i13:A, 1i13:B, 1i14:A, 1i14:B, 1p17:A, 1p17:C, 1p17:D, 1p18:A, 1p18:B, 1p19:A, 1p19:B, 1p19:C, 1p19:D, 1tc1:A, 1tc1:B, 1tc2:A, 1tc2:B
10 7cmj:A 184 174 0.4096 0.4185 0.4425 1.30e-41 1pzm:A, 1pzm:B
11 1bzy:A 214 180 0.3617 0.3178 0.3778 9.23e-31 6bnj:A, 6bnj:B, 6bnj:C, 6bnj:D, 5brn:A, 5brn:C, 5brn:D, 1bzy:B, 1bzy:C, 1bzy:D, 1d6n:A, 1d6n:B, 3gep:A, 3gep:B, 3ggc:A, 3ggc:B, 3ggj:A, 3ggj:B, 5hia:A, 5hia:B, 5hia:C, 5hia:D, 1hmp:A, 1hmp:B, 4ijq:A, 4ijq:B, 4ijq:C, 4ijq:D, 4rab:A, 4rab:B, 4rab:C, 4rab:D, 4rac:A, 4rac:B, 4rac:C, 4rac:D, 4rad:A, 4rad:B, 4rad:C, 4rad:D, 4rad:E, 4rad:F, 4rad:G, 4rad:H, 4ran:A, 4ran:B, 4ran:C, 4ran:D, 4rao:A, 4rao:B, 4rao:C, 4rao:D, 4raq:A, 4raq:B, 4raq:C, 4raq:D, 7san:A, 7san:B, 7san:C, 7san:D, 8tpv:A, 8tpv:B, 8tpv:C, 8tpv:D, 5w8v:A, 5w8v:B, 5w8v:C, 5w8v:D
12 6igs:B 167 167 0.3245 0.3653 0.3653 2.25e-30 6igs:A, 6igs:C, 6igs:D
13 6aps:A 185 177 0.3511 0.3568 0.3729 7.01e-28 6aps:B, 6apt:A, 6apt:B, 6apu:A, 6apu:B, 6apv:A, 6apv:B, 6apv:C, 6apv:D, 5jsq:A, 5jsq:B, 5jv5:A, 5jv5:B, 5k51:A, 5k51:B, 5k51:C, 5k51:D, 5kam:A, 5kam:C, 5kap:A, 5kap:B, 6mxg:A, 6mxg:B, 7sb7:A, 7sb7:B, 8tr1:A, 8tr1:B, 8tr1:C, 8tr1:D, 8ts4:A, 8ts4:B
14 6mxc:C 220 195 0.3670 0.3136 0.3538 8.58e-26 6aqo:A, 6aqo:B, 6aqo:C, 6aqo:D, 6aqo:E, 6aqo:F, 6ar9:A, 6ar9:B, 6ar9:C, 6ar9:D, 6ar9:E, 6ar9:F, 6mxb:A, 6mxb:B, 6mxb:C, 6mxb:D, 6mxb:E, 6mxb:F, 6mxc:A, 6mxc:B, 6mxc:D, 6mxc:E, 6mxc:F, 6mxd:A, 6mxd:B, 6mxd:C, 6mxd:D, 7scr:A, 7scr:C, 7scr:B, 7scr:D, 7scr:E, 7scr:F
15 8fx3:B 223 193 0.3138 0.2646 0.3057 1.73e-25 8fwy:A, 8fwy:B, 8fwz:A, 8fwz:B, 8fx0:A, 8fx0:B, 8fx1:A, 8fx1:B, 8fx2:A, 8fx2:B, 8fx3:A
16 2jbh:B 213 180 0.3245 0.2864 0.3389 2.61e-24 2jbh:A
17 5ipf:A 201 185 0.3138 0.2935 0.3189 2.43e-23 5ipf:B, 5ipf:C, 5ipf:D
18 5brn:B 194 170 0.3298 0.3196 0.3647 4.01e-23 5bsk:A, 5bsk:B, 5bsk:C, 5bsk:D, 4kn6:A, 8tpy:A, 8tpy:B, 8tpy:C, 8tpy:D
19 3ozf:B 234 190 0.3351 0.2692 0.3316 1.02e-22 1cjb:A, 1cjb:B, 1cjb:C, 1cjb:D, 3ozf:A, 3ozf:C, 3ozf:D, 3ozg:A, 3ozg:B, 3ozg:C, 3ozg:D, 7tux:A, 7tux:B, 7tux:C, 7tux:D
20 2vfa:B 205 188 0.3191 0.2927 0.3191 6.17e-22 2vfa:A
21 6bo7:A 220 173 0.3085 0.2636 0.3353 6.91e-21 6bo7:B, 6bo7:C, 6bo7:D, 6bo7:E, 6bo7:F, 6bo7:G, 6bo7:H, 6bo7:I, 6bo7:J, 6bo7:K, 6bo7:L
22 5esw:A 190 172 0.2660 0.2632 0.2907 1.72e-20 5esx:A, 5esx:B
23 1fsg:A 233 205 0.3191 0.2575 0.2927 5.04e-19 1dbr:A, 1dbr:B, 1dbr:D, 1fsg:C, 1qk3:A, 1qk3:B, 1qk3:C, 1qk3:D, 1qk4:A, 1qk4:B, 1qk4:C, 1qk4:D, 1qk5:A, 1qk5:B
24 5xtk:A 150 130 0.2074 0.2600 0.3000 4.54e-05
25 1a95:B 150 140 0.2128 0.2667 0.2857 9.76e-05 1a95:C, 1a96:B, 1a96:C, 1a97:B, 1a97:C, 4jit:B, 4jit:C
26 1i5e:A 208 51 0.1011 0.0913 0.3725 0.002 1i5e:B
27 6asv:C 311 34 0.0851 0.0514 0.4706 0.030 6asv:A, 6asv:B, 4s2u:A, 7xmu:A, 7xmu:F, 7xmu:C, 7xmu:D, 7xmu:B, 7xmu:E, 7xmv:A, 7xmv:F, 7xmv:C, 7xmv:E, 7xmv:B, 7xmv:D, 7xn3:A, 7xn3:E, 7xn3:C, 7xn3:B, 7xn3:D, 7xn3:F
28 5iao:A 171 56 0.0904 0.0994 0.3036 0.037 5iao:C, 5iao:F
29 4p86:A 177 95 0.1436 0.1525 0.2842 0.23 4p86:B, 4p86:C, 4p86:D
30 1dqn:A 230 169 0.2340 0.1913 0.2604 0.28 1dqn:B, 1dqp:A, 1dqp:B
31 2igb:B 173 58 0.0798 0.0867 0.2586 0.31 2igb:A, 4p83:A, 4p83:B, 4p83:C, 4p83:D, 1xz8:A, 1xz8:B, 1xzn:A, 1xzn:B
32 4zfn:B 177 134 0.1702 0.1808 0.2388 0.39 5bqp:A, 5bqp:B, 5bqp:C, 5bqp:D, 4z1o:A, 4z1o:B, 4zfn:A
33 1u9z:A 274 31 0.0745 0.0511 0.4516 0.60 1u9z:B, 1u9z:C, 1u9z:D
34 2wns:B 199 50 0.0851 0.0804 0.3200 0.77 2wns:A
35 4jls:B 135 140 0.1809 0.2519 0.2429 1.3 4jls:A, 4jls:C, 4jls:D, 4jls:E, 4jls:H, 4jls:I, 4jls:J
36 6wn8:E 210 55 0.0745 0.0667 0.2545 1.5 6wn8:F, 6wn8:A, 6wn8:B
37 2h1i:A 212 17 0.0638 0.0566 0.7059 1.8 2h1i:B, 2h1i:C
38 7l1i:A 169 23 0.0691 0.0769 0.5652 3.1
39 4twb:A 278 42 0.0798 0.0540 0.3571 4.6 4twb:B, 4twb:C, 4twb:D, 4twb:E, 4twb:F
40 2iut:A 408 26 0.0638 0.0294 0.4615 4.7 2iut:B, 2iuu:A, 2iuu:B, 2iuu:C, 2iuu:D, 2iuu:E, 2iuu:F, 6t8b:A, 6t8b:B, 6t8b:C, 6t8b:F, 6t8b:D, 6t8b:E, 6t8g:A, 6t8g:B, 6t8g:C, 6t8g:D, 6t8g:E, 6t8g:F, 6t8o:A, 6t8o:B, 6t8o:C, 6t8o:D, 6t8o:E, 6t8o:F
41 2xzj:A 386 58 0.1011 0.0492 0.3276 4.9 4m4v:A, 2xzi:A, 2xzi:B, 2xzj:B, 2xzk:A, 2xzk:B
42 4rv4:B 211 34 0.0745 0.0664 0.4118 5.5 4rv4:A, 4rv4:C
43 6nyt:A 135 66 0.0798 0.1111 0.2273 6.1
44 7zgz:X 753 38 0.0798 0.0199 0.3947 6.5 8c7f:B
45 8c7f:A 772 38 0.0798 0.0194 0.3947 6.5 7zb3:A, 7zb3:B, 7zdy:W, 7zdy:Y, 7zgz:Y
46 5bu8:A 199 89 0.1330 0.1256 0.2809 8.6 5bu5:A, 5bu5:B, 5bu5:D, 5bu5:E, 5bu5:F, 5bu8:B, 5bvz:A, 5bvz:B, 5bvz:C, 5bvz:D, 5bvz:E, 5bvz:F
47 8e3s:A 503 163 0.2181 0.0815 0.2515 9.1 8fzr:A
48 6mrl:D 326 83 0.1330 0.0767 0.3012 9.3 6mrl:A, 6mrl:B
49 1rlj:A 135 11 0.0532 0.0741 0.9091 9.5

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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