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BioLiP
>protein
ELQLVPFQLGHFPILQRWFATEKELVQWAGPALRHPLSLEQMHEDLAESRRRPPLRLLWSACRDDQVIGHCQLLFDRRNG
VVRLARIVLAPSARGQGLGLPMLEALLAEAFADADIERVELNVYDWNAAARHLYRRAGFREEGLRRSATRVGRERWNVVL
MGLLRQEWAA

The query sequence (length=170) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3owc:A 172 170 1.0000 0.9884 1.0000 9.06e-121 3owc:B
2 8q6u:B 166 168 0.3471 0.3554 0.3512 1.22e-26 8q6u:A
3 7ovu:A 196 154 0.2412 0.2092 0.2662 4.68e-06
4 2vi7:C 165 61 0.1647 0.1697 0.4590 5.42e-05
5 6e1x:C 176 58 0.1118 0.1080 0.3276 9.19e-05 5cnp:B, 5cnp:D, 5cnp:F, 6cx8:A, 6cx8:B, 6cx8:C, 6cx8:D, 6cx8:E, 6cx8:F, 6e1x:A, 6e1x:B, 6e1x:D, 4mhd:A, 4mhd:B, 4mhd:C, 4mi4:A, 4mi4:B, 4mi4:C, 4ncz:A, 4ncz:C, 4ncz:B, 4r57:A, 4r57:B, 4r57:C, 4r57:D, 4r57:E, 4r57:F, 4r57:G, 4r57:H, 4r57:I, 4r57:J, 4r57:K, 4r57:L, 4r87:A, 4r87:B, 4r87:C, 4r87:D, 4r87:E, 4r87:F, 4r87:G, 4r87:H, 4r87:I, 4r87:J, 4r87:K, 4r87:L, 5ug4:A, 5ug4:B, 5ug4:C, 4ygo:A, 4ygo:C, 4ygo:D, 4ygo:E
6 2i79:A 171 107 0.1824 0.1813 0.2897 5.65e-04 2i79:B, 2i79:C, 2i79:D, 2i79:E, 2i79:F
7 2ge3:A 164 108 0.1765 0.1829 0.2778 6.00e-04 2ge3:B, 2ge3:C
8 6vfn:A 167 83 0.1118 0.1138 0.2289 0.001 6vfn:F, 6vfn:B, 6vfn:C, 6vfn:D, 6vfn:E, 6vfn:H, 6vfn:I, 6vfn:J, 6vfn:G, 6vfn:L, 6vfn:K
9 3wr7:A 170 85 0.1176 0.1176 0.2353 0.001 4r9m:A, 3wr7:C, 3wr7:B, 3wr7:D
10 2bei:A 156 58 0.1176 0.1282 0.3448 0.003 2q4v:A
11 1ghe:B 171 51 0.1176 0.1170 0.3922 0.006 1ghe:A, 1j4j:A, 1j4j:B
12 6d72:B 176 85 0.1118 0.1080 0.2235 0.008 6d72:A
13 4kub:A 160 122 0.1588 0.1688 0.2213 0.012 4klv:A, 4klw:A, 4kor:A, 4kos:A, 4kot:A, 4kou:A, 4kov:A, 4kow:A, 4kox:A, 4koy:A, 4l89:A, 4l8a:A, 4m3s:A, 4oad:A, 4oae:A, 3pgp:A, 5vd6:A, 5vdb:A
14 3f5b:A 172 62 0.1118 0.1105 0.3065 0.016
15 6wqc:A 293 88 0.1235 0.0717 0.2386 0.021 6wqb:A
16 6c32:A 209 83 0.1471 0.1196 0.3012 0.025 6c37:A
17 4jwp:A 165 122 0.2176 0.2242 0.3033 0.047
18 2vzz:A 210 77 0.1471 0.1190 0.3247 0.072 2vzy:A, 2vzy:B, 2vzy:D, 2vzz:B, 2vzz:C, 2vzz:D
19 2vzy:C 189 77 0.1471 0.1323 0.3247 0.075
20 2cnm:A 151 80 0.1471 0.1656 0.3125 0.077 2cnm:B, 2cnm:C, 2cns:A, 2cns:B, 2cns:C, 2cnt:A, 2cnt:B, 2cnt:C, 2cnt:D
21 3gy9:A 149 42 0.0882 0.1007 0.3571 0.16 3gya:A
22 8gxf:B 187 111 0.1706 0.1551 0.2613 0.22 8gxf:A, 8gxf:C, 8gxf:D
23 3fbu:A 166 80 0.1000 0.1024 0.2125 0.36
24 7wx5:A 288 56 0.0941 0.0556 0.2857 0.45 7wx6:A, 7wx7:A
25 4xpl:A 141 101 0.1294 0.1560 0.2178 0.47
26 2ob0:C 166 51 0.1059 0.1084 0.3529 0.58 2ob0:A, 2ob0:B, 6ppl:A, 2psw:A, 2psw:B, 2psw:C, 3tfy:A, 3tfy:B, 3tfy:C, 6wf3:A, 6wf3:B, 6wf3:C, 6wf3:D, 6wf3:E, 6wf3:F, 6wf5:A, 6wf5:B, 6wfg:A, 6wfg:C, 6wfg:E, 6wfk:A, 6wfk:B, 6wfk:C, 6wfn:A, 6wfo:A, 6wfo:B, 6wfo:C, 4x5k:A
27 7vh6:A 768 47 0.1000 0.0221 0.3617 0.65 7vh6:B, 7vh6:C, 7vh6:D, 7vh6:E, 7vh6:F
28 2ozg:A 388 60 0.0941 0.0412 0.2667 0.68
29 2j8m:A 171 50 0.1118 0.1111 0.3800 0.88 2bl1:A, 2j8m:B, 2j8r:A, 2j8r:B
30 8cmk:A 913 72 0.1471 0.0274 0.3472 1.00 8cmk:B, 6gx9:A, 6gx9:B
31 3mgd:B 154 58 0.0882 0.0974 0.2586 1.4 3mgd:A
32 7daj:B 150 139 0.1647 0.1867 0.2014 2.0 7daj:A, 7dak:A, 7dak:B, 7dal:A, 7dal:B
33 7zkt:B 202 47 0.1000 0.0842 0.3617 2.1 7zhc:A, 7zhc:B, 7zkt:A, 7zkt:C, 7zkt:D, 7zkt:E, 7zkt:F, 7zkt:G, 7zkt:H
34 7bok:A 309 47 0.1000 0.0550 0.3617 2.6 7bok:B, 7bok:C, 7bok:D, 7bok:E, 7bok:F
35 2ref:A 203 56 0.0941 0.0788 0.2857 2.8 2ref:B
36 1wwz:A 157 60 0.1000 0.1083 0.2833 4.1 1wwz:B
37 4jxr:B 185 70 0.1235 0.1135 0.3000 4.7
38 8gxk:B 188 81 0.1353 0.1223 0.2840 5.3 8gxk:A, 8gxk:C, 8gxk:D
39 2iv7:A 370 31 0.0647 0.0297 0.3548 7.1 2iw1:A
40 7ovv:B 196 80 0.1235 0.1071 0.2625 8.2 7ovv:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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