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BioLiP
>protein
ELPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRI

The query sequence (length=33) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 2kxq:A 90 33 0.9091 0.3333 0.9091 2.73e-17 2laz:A, 2lb0:A, 2ltz:A
2 2kxq:A 90 32 0.3939 0.1444 0.4062 0.008 2laz:A, 2lb0:A, 2ltz:A
3 5dws:C 40 31 0.4545 0.3750 0.4839 1.78e-06
4 5cq2:A 76 31 0.4545 0.1974 0.4839 3.22e-06 5dws:A, 5dws:E, 5dws:G, 5dzd:A, 5dzd:B, 2jo9:A, 4rof:A, 4rof:B
5 5cq2:A 76 31 0.4545 0.1974 0.4839 0.002 5dws:A, 5dws:E, 5dws:G, 5dzd:A, 5dzd:B, 2jo9:A, 4rof:A, 4rof:B
6 2ltv:A 36 32 0.3636 0.3333 0.3750 1.38e-05 2law:A
7 1i5h:W 50 32 0.3939 0.2600 0.4062 4.98e-05
8 4lcd:A 419 32 0.4545 0.0358 0.4688 5.12e-05 4lcd:B
9 2m3o:W 43 32 0.3939 0.3023 0.4062 9.58e-05 2kpz:A, 2kq0:A, 2mpt:A, 4n7h:A
10 6jjz:B 96 32 0.3939 0.1354 0.4062 1.27e-04 6jjz:A, 6kkg:A, 6kkg:B
11 2laj:A 40 32 0.3939 0.3250 0.4062 1.33e-04
12 2lb1:A 35 32 0.3939 0.3714 0.4062 3.28e-04 2ltx:A
13 1jmq:A 46 31 0.4242 0.3043 0.4516 0.001 1k5r:A, 1k9q:A, 1k9r:A, 2lax:A, 2lay:A, 2ltw:A
14 6jjy:A 128 31 0.3636 0.0938 0.3871 0.001 6j68:A, 6j68:B, 6j69:A, 6jjw:A, 6jjx:B, 6jjx:A
15 6jjy:A 128 33 0.3636 0.0938 0.3636 2.2 6j68:A, 6j68:B, 6j69:A, 6jjw:A, 6jjx:B, 6jjx:A
16 2djy:A 42 32 0.3939 0.3095 0.4062 0.002
17 2jmf:A 43 31 0.3939 0.3023 0.4194 0.007
18 7lp2:E 37 30 0.3030 0.2703 0.3333 0.010 2lb2:A, 7lp2:A, 7lp2:C, 2lty:A
19 2nc3:A 33 31 0.3333 0.3333 0.3548 0.062 2nc4:A, 2nc5:A, 2nc6:A
20 7lp3:A 37 32 0.2727 0.2432 0.2812 0.062 7lp3:C
21 2n8t:A 39 32 0.2727 0.2308 0.2812 0.088
22 8sg2:A 163 32 0.3636 0.0736 0.3750 0.24 6dun:A, 6dun:B, 7efj:A, 7efx:A, 7ekv:A, 7f0m:A, 7f0m:C, 7f0m:B, 7f0m:D, 1f8a:B, 4gwv:A, 3i6c:A, 3i6c:B, 1i8g:B, 1i8h:B, 3ikd:A, 3ikd:B, 3ikg:A, 3ikg:B, 9inr:A, 9inr:B, 2itk:A, 3jyj:A, 3jyj:B, 3kab:A, 3kac:A, 3kac:B, 3kad:A, 3kaf:A, 3kag:A, 3kah:A, 3kai:A, 3kce:A, 2lb3:A, 2n1o:A, 1nmw:A, 3ntp:A, 6o33:A, 6o34:A, 3odk:A, 3oob:A, 1pin:A, 2q5a:A, 3tc5:A, 3tcz:A, 3tdb:A, 4tns:A, 4tyo:A, 4tyo:B, 5uy9:A, 6vaj:A, 3wh0:A, 2xp3:A, 2xp4:A, 2xp5:A, 2xp6:A, 2xp7:A, 2xp8:A, 2xp9:A, 2xpa:A, 2xpb:A
23 2ez5:W 46 31 0.2727 0.1957 0.2903 0.94
24 6u75:A 261 16 0.2424 0.0307 0.5000 1.3 6u75:B
25 7pug:A 829 26 0.3333 0.0133 0.4231 1.7 7pxq:A
26 6i1d:A 458 21 0.2424 0.0175 0.3810 2.0
27 7pl9:A 994 8 0.2121 0.0070 0.8750 3.3 7pl9:B, 7pl9:C, 7pl9:D, 7pl9:E
28 3ecq:B 1347 22 0.2424 0.0059 0.3636 3.5 5a55:A, 5a56:A, 5a57:A, 5a58:A, 5a59:A, 5a5a:A, 3ecq:A
29 8pxx:A 99 18 0.2424 0.0808 0.4444 3.7 2dyf:A
30 4c91:A 811 25 0.3333 0.0136 0.4400 5.0
31 5jne:A 351 16 0.2121 0.0199 0.4375 6.0 3i2d:A, 5jne:E
32 2bcg:G 442 21 0.2424 0.0181 0.3810 7.0 1ukv:G
33 4rel:A 446 15 0.2121 0.0157 0.4667 7.0 4rem:A, 4ren:A, 4whm:A
34 2oei:A 37 31 0.3030 0.2703 0.3226 7.1 2ho2:A
35 2acz:C 129 25 0.2424 0.0620 0.3200 7.3 7jz2:C, 7jz2:G, 7jz2:K, 1nek:C, 1nen:C, 2wdq:C, 2wdq:G, 2wdq:K, 2wdr:C, 2wdr:G, 2wdr:K, 2wdv:C, 2wdv:G, 2wdv:K, 2wp9:C, 2wp9:G, 2wp9:K, 2ws3:C, 2ws3:G, 2ws3:K, 2wu2:C, 2wu2:G, 2wu2:K, 2wu5:C, 2wu5:G, 2wu5:K, 6wu6:C, 6wu6:G, 6wu6:K
36 2nz2:A 402 27 0.2727 0.0224 0.3333 7.6
37 7dm1:B 334 29 0.2727 0.0269 0.3103 8.9 7dm1:A, 7dm2:A, 1pc3:A, 1pc3:B
38 4jcm:A 669 20 0.3030 0.0149 0.5000 9.7

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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