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BioLiP
>protein
ELNKADAKLGTEFGKKLDLNNSSIREFRQYPGMFPTLAKMIIDAAPYDSVQEVLEIPGLTDAQKEIIERYIGEFTITPVE
PILQEGDFRLNTGVY

The query sequence (length=95) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8wql:UD 95 95 1.0000 1.0000 1.0000 2.36e-66 8wql:UE, 8wql:U1, 8wql:u1, 8wql:uD, 8wql:uE
2 7n8o:U 95 95 0.5579 0.5579 0.5579 4.43e-32 7n8o:u, 7rcv:U, 7rcv:u, 8tow:U, 8tow:u
3 7das:A 674 32 0.1368 0.0193 0.4062 1.3 3ciy:A, 3ciy:B, 7da7:A, 7da7:B, 7das:B, 7wm4:C, 7wm4:D, 7wm4:E, 7wm4:F
4 7aju:CE 436 30 0.1158 0.0252 0.3667 2.6 7ajt:CE, 7d4i:3E, 7d5s:3E, 7d5t:3E, 7d63:3E, 6ke6:3E, 6lqp:3E, 6lqq:3E, 6lqr:3E, 6lqs:3E, 6lqt:3E, 6lqu:3E, 6lqv:3E, 7suk:SB, 5wyj:3E, 5wyk:3E, 6zqa:CE, 6zqb:CE, 6zqc:CE, 6zqd:CE, 6zqe:CE
5 6sh6:A 681 25 0.1158 0.0162 0.4400 2.7 8ejm:A, 8ro2:DX, 5xdr:A
6 7oop:M 810 30 0.1158 0.0136 0.3667 2.8 7opc:M, 7opd:M
7 2e2l:A 317 68 0.2211 0.0662 0.3088 4.2 2e2l:C, 2e2l:F
8 7mq8:SA 396 30 0.1368 0.0328 0.4333 6.5 7mq9:SA, 7mqa:SA
9 6kii:A 485 28 0.1263 0.0247 0.4286 6.8
10 8hr6:A 359 23 0.1053 0.0279 0.4348 6.8 8hr6:B
11 1q2l:A 937 42 0.1684 0.0171 0.3810 7.0
12 7qhm:A 402 23 0.1053 0.0249 0.4348 8.1 7q21:A, 7q21:a, 7qhm:N, 7qho:A, 7qho:N
13 1zh8:A 325 26 0.1368 0.0400 0.5000 9.4 1zh8:B
14 6jcy:C 1139 26 0.1158 0.0097 0.4231 9.6 6bzo:C, 6c04:C, 6c06:C, 6dv9:C, 6dvb:C, 6dvc:C, 6dvd:C, 6dve:C, 8e74:C, 8e79:C, 8e82:C, 8e8m:C, 8e95:C, 6edt:C, 6ee8:C, 6eec:C, 8ehq:C, 8ej3:C, 8eoe:C, 8eof:C, 8eos:C, 8eot:C, 8exy:C, 6fbv:C, 8hih:C, 6jcx:C, 7kif:C, 7kin:C, 6koo:C, 6kop:C, 6koq:C, 6m7j:C, 7p5x:AC, 7rwi:C, 6tye:C, 6tyf:C, 6tyg:C, 7u22:C, 5uh5:C, 5uh6:C, 5uh8:C, 5uh9:C, 5uha:C, 5uhb:C, 5uhc:C, 5uhd:C, 5uhe:C, 5uhf:C, 5uhg:C, 5vi5:C, 6vvx:C, 6vvy:C, 6vvz:C, 6vw0:C, 5zx2:C
15 7shk:L 282 52 0.1579 0.0532 0.2885 9.6 7shl:L

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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