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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
ELEELEEFEFKHGPMSLINDAMVTRTPVIISLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRERFISKLFL
RGDSVIVVLKTP

The query sequence (length=92) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6n7p:M 107 92 1.0000 0.8598 1.0000 1.44e-63 7b9v:m, 7b9v:j, 6bk8:a, 7dco:n, 6exn:m, 6exn:j, 6g90:i, 6g90:u, 5gam:j, 5gan:m, 5gan:j, 5gao:m, 5gm6:g, 5gmk:g, 5gmk:e, 6j6g:g, 6j6g:e, 6j6h:g, 6j6h:e, 6j6n:g, 6j6n:e, 6j6q:g, 6j6q:e, 3jcm:Q, 3jcm:U, 5lj3:j, 5lj3:m, 5lj5:j, 5lj5:m, 5mps:j, 5mq0:j, 6n7r:M, 6n7x:M, 5nrl:u, 5nrl:m, 5nrl:i, 7oqb:u, 7oqc:i, 7oqe:i, 7oqe:u, 8w2o:M, 5wsg:g, 5wsg:W, 5y88:g, 5y88:n, 5ylz:g, 5ylz:n, 5zwm:R, 5zwm:c, 5zwm:n, 5zwn:c, 5zwo:c, 5zwo:R, 5zwo:n
2 3jb9:G 95 92 0.5870 0.5684 0.5870 1.66e-35 3jb9:l
3 8ro0:d 94 92 0.5543 0.5426 0.5543 8.89e-32 8ro1:d
4 8y6o:q 104 83 0.5326 0.4712 0.5904 1.63e-31 7a5p:h, 7abg:a, 7abi:a, 6ah0:k, 6ah0:P, 6ahd:P, 6ahd:k, 8ch6:l, 8ch6:4, 7dvq:k, 8h6e:2c, 8h6j:2c, 8h6k:4c, 8h6k:2c, 8h6l:4c, 8h6l:2c, 8i0w:k, 6id0:k, 6id1:k, 5o9z:h, 5o9z:a, 4pjo:R, 7qtt:l, 8qzs:42, 7w59:k, 7w5a:k, 7w5b:k, 5xjc:k, 8y7e:k, 5yzg:k, 5z56:k, 5z57:k, 5z58:k
5 4wzj:KK 104 90 0.5543 0.4904 0.5667 7.26e-30 7abg:h, 7abi:h, 6ahd:c, 7b0y:e, 8c6j:m, 8c6j:a, 7evo:a, 9fmd:k, 9fmd:d, 8h6e:5c, 8h6e:4c, 8h6j:5c, 8h6j:4c, 8h6k:5c, 8h6l:5c, 8hk1:a, 8i0p:c, 8i0p:h, 8i0r:c, 8i0r:h, 8i0s:c, 8i0s:h, 8i0t:h, 8i0u:c, 8i0u:h, 8i0v:c, 8i0v:h, 8i0w:c, 6icz:d, 6id0:d, 6id1:d, 5mqf:h, 5mqf:a, 4pjo:D, 4pjo:d, 4pjo:r, 8q7q:c, 8q7v:c, 8q7w:c, 8q7x:c, 8q91:j, 6qdv:m, 6qdv:j, 8qo9:22, 8qo9:52, 8qo9:42, 6qw6:42, 6qw6:52, 6qx9:12, 6qx9:52, 6qx9:22, 6qx9:42, 8qxd:22, 8qxd:42, 8qxd:52, 8qzs:52, 8qzs:22, 8r08:12, 8r08:42, 8r08:22, 8r08:52, 8r09:22, 8r09:52, 8r09:42, 8r0a:52, 8r0a:42, 8r0a:22, 8r0b:22, 8r0b:42, 8r0b:52, 8rc0:j, 8rm5:22, 8rm5:52, 8rm5:42, 8ro2:d, 7vpx:a, 7vpx:i, 7w59:d, 7w5a:d, 7w5b:d, 4wzj:D, 4wzj:K, 4wzj:R, 4wzj:DD, 4wzj:RR, 4wzj:DDD, 4wzj:KKK, 4wzj:RRR, 4wzj:DDDD, 4wzj:KKKK, 4wzj:RRRR, 5xjc:d, 6y53:h, 6y5q:h, 8y6o:c, 8y6o:j, 5yzg:d, 5z56:d, 5z57:d, 5z58:d
6 5vsu:C 81 65 0.2391 0.2716 0.3385 4.82e-08 6aso:C, 4c8q:C, 5gan:3, 4m7a:J, 4m7a:C, 4m7d:J, 4m7d:C, 5nrl:3
7 6qw6:63 85 81 0.2826 0.3059 0.3210 2.89e-07 6ah0:r, 6qx9:63, 8qxd:63, 8r08:63, 8r09:63, 8r0a:63, 8r0b:63, 8rm5:63
8 6ppn:C 75 61 0.2500 0.3067 0.3770 4.22e-07 6ppn:K, 6ppp:C, 6ppp:K, 6ppq:C, 6ppv:C
9 1lnx:A 74 65 0.2065 0.2568 0.2923 1.45e-04 1lnx:B, 1lnx:C, 1lnx:D, 1lnx:E, 1lnx:F, 1lnx:G
10 1i5l:C 74 79 0.2283 0.2838 0.2658 1.53e-04 1i5l:E, 1i5l:F, 1i5l:G, 1i5l:J, 1i5l:K, 1i5l:L, 1i5l:A, 1i5l:B, 1i5l:H
11 1loj:C 77 75 0.2065 0.2468 0.2533 3.11e-04 1loj:A, 1loj:B, 1loj:D, 1loj:E, 1loj:F, 1loj:G, 1loj:H, 1loj:I, 1loj:J, 1loj:K, 1loj:L, 1loj:M, 1loj:N
12 8ro0:e 80 77 0.2391 0.2750 0.2857 0.001 8ro1:e
13 5mkn:d 72 63 0.2283 0.2917 0.3333 0.002 5mki:C, 5mki:D, 5mki:E, 5mki:F, 5mki:G, 5mki:I, 5mki:J, 5mki:K, 5mki:L, 5mkn:A, 5mkn:G, 5mkn:B, 5mkn:C, 5mkn:D, 5mkn:E, 5mkn:F, 5mkn:H, 5mkn:I, 5mkn:J, 5mkn:K, 5mkn:L, 5mkn:M, 5mkn:N, 5mkn:O, 5mkn:P, 5mkn:Q, 5mkn:R, 5mkn:T, 5mkn:U, 5mkn:V, 5mkn:W, 5mkn:X, 5mkn:Y, 5mkn:Z, 5mkn:a, 5mkn:b
14 6ppq:A 69 62 0.1739 0.2319 0.2581 0.14 6ppv:A
15 7abg:j 81 77 0.1957 0.2222 0.2338 0.18 7a5p:j, 7a5p:e, 7abi:j, 6ah0:c, 6ahd:e, 7b0y:g, 8c6j:p, 8c6j:e, 8ch6:i, 8ch6:1, 7dvq:e, 7dvq:l, 9fmd:l, 9fmd:e, 8h6e:5e, 8h6e:4e, 8h6j:5e, 8h6j:4e, 8h6k:5e, 8h6l:5e, 8i0p:e, 8i0p:j, 8i0r:e, 8i0r:j, 8i0s:e, 8i0s:j, 8i0t:e, 8i0t:j, 8i0u:e, 8i0u:j, 8i0v:e, 8i0v:j, 8i0w:e, 8i0w:l, 6icz:e, 6id0:e, 6id1:e, 5mqf:j, 5mqf:c, 5o9z:j, 4pjo:E, 4pjo:e, 4pjo:S, 4pjo:s, 8q7q:e, 8q7v:e, 8q7w:e, 8q7x:e, 6qdv:p, 6qdv:e, 8qo9:2e, 8qo9:5e, 8qo9:4e, 7qtt:i, 6qw6:4e, 6qw6:5e, 6qx9:1e, 6qx9:5e, 6qx9:2e, 6qx9:4e, 8qxd:2e, 8qxd:4e, 8qzs:5e, 8qzs:2e, 8qzs:4e, 8r08:1e, 8r08:2e, 8r08:4e, 8r09:2e, 8r09:5e, 8r09:4e, 8r0a:5e, 8r0a:2e, 8r0a:4e, 8r0b:4e, 8r0b:5e, 8rm5:2e, 8rm5:5e, 8rm5:4e, 8ro2:e, 6v4x:E, 7vpx:l, 7w59:e, 7w59:l, 7w5a:e, 7w5a:l, 7w5b:e, 7w5b:l, 4wzj:E, 4wzj:L, 4wzj:S, 4wzj:EE, 4wzj:LL, 4wzj:SS, 4wzj:EEE, 4wzj:LLL, 4wzj:SSS, 4wzj:EEEE, 4wzj:LLLL, 4wzj:SSSS, 5xjc:e, 5xjc:l, 8y6o:e, 8y6o:l, 8y6o:s, 8y7e:l, 5yzg:e, 5yzg:l, 5z56:e, 5z56:l, 5z57:e, 5z57:l, 5z58:e, 5z58:l
16 6qw6:68 95 68 0.1957 0.1895 0.2647 0.25 6ahd:z, 8h6e:6g, 8h6j:6g, 8h6k:6g, 8h6l:6g, 6qx9:68, 8qxd:68, 8r08:68, 8r09:68, 8r0a:68, 8r0b:68, 8rm5:68
17 6v4x:B 76 55 0.1522 0.1842 0.2545 0.65
18 7w59:b 102 59 0.1957 0.1765 0.3051 0.65 7abg:m, 7abi:m, 6ahd:a, 7b0y:j, 8c6j:b, 8ch6:8, 7dvq:i, 9fmd:i, 8h6e:5a, 8h6e:4a, 8h6j:5a, 8h6j:4a, 8h6k:5a, 8h6l:5a, 8i0p:a, 8i0p:m, 8i0r:a, 8i0r:m, 8i0s:m, 8i0t:a, 8i0t:m, 8i0u:m, 8i0v:a, 8i0v:m, 8i0w:a, 8i0w:i, 6icz:i, 4pjo:B, 4pjo:b, 4pjo:P, 4pjo:p, 8q7q:b, 8q7v:b, 8q7w:b, 8q7x:b, 8q91:h, 6qdv:k, 8qo9:5b, 8qo9:4b, 6qw6:4b, 6qw6:5b, 6qx9:1b, 6qx9:5b, 6qx9:2b, 6qx9:4b, 8qxd:4b, 8qxd:5b, 8qzs:5b, 8qzs:2b, 8r08:1b, 8r08:4b, 8r08:5b, 8r09:5b, 8r0a:5b, 8r0b:5b, 8rc0:h, 8rm5:2b, 8rm5:5b, 8ro2:b, 7vpx:k, 7w59:i, 7w5a:b, 7w5a:i, 7w5b:b, 7w5b:i, 4wzj:B, 5xjc:b, 5xjc:i, 8y6o:a, 8y6o:h, 8y6o:o, 8y7e:i, 5yzg:b, 5yzg:i, 5z56:b, 5z56:i, 5z57:b, 5z57:i, 5z58:b, 5z58:i
19 3jb9:E 98 57 0.1413 0.1327 0.2281 0.82 3jb9:b
20 8ro0:b 98 57 0.1630 0.1531 0.2632 0.92 8ro1:b
21 1cw0:A 155 47 0.1957 0.1161 0.3830 1.2 1odg:A, 1vsr:A
22 9fmd:b 87 45 0.1413 0.1494 0.2889 1.2 7a5p:m, 7a5p:b, 7abg:f, 7abi:f, 6ah0:U, 8ch6:n, 5o9z:f, 6qdv:b, 7qtt:n, 4wzj:I, 4wzj:P, 4wzj:BB, 4wzj:II, 4wzj:PP, 4wzj:BBB, 4wzj:III, 4wzj:PPP, 4wzj:BBBB, 4wzj:IIII, 4wzj:PPPP
23 4amv:A 608 36 0.1522 0.0230 0.3889 1.5 4amv:B, 4amv:C, 7dnr:A, 2j6h:A, 2j6h:B, 1jxa:A, 1jxa:B, 1moq:A, 1mor:A, 1mos:A, 3ooj:A, 3ooj:B, 3ooj:C, 3ooj:D, 3ooj:E, 3ooj:F, 3ooj:G, 3ooj:H, 2vf5:X, 1xff:A, 1xff:B, 1xfg:A, 1xfg:B
24 4c20:B 605 49 0.1739 0.0264 0.3265 1.9 4c20:A, 4c21:A, 4c21:B, 4c22:A, 4c22:B
25 6tfl:A 62 43 0.1304 0.1935 0.2791 2.0 6tfl:B, 6tfl:C, 6tfl:D, 6tfl:E, 6tfl:F, 6tfl:G, 6tfl:H, 6tfl:I, 6tfl:J, 6tfl:K, 6tfl:L, 6tfl:M, 6tfl:N
26 4re6:A 577 35 0.1413 0.0225 0.3714 2.1 2hu5:A, 2hu5:B, 2hu7:A, 2hu7:B, 2hu8:A, 2hu8:B, 4re5:A, 4re5:B, 4re6:C, 1ve7:A, 1ve7:B
27 6aso:H 83 56 0.1848 0.2048 0.3036 2.8
28 5jnb:B 324 47 0.1522 0.0432 0.2979 3.1 5jnb:C, 5jnb:D
29 8oh5:C 1172 37 0.1413 0.0111 0.3514 3.4 8oh5:F, 8oh5:I, 8oh5:L, 8oh9:C, 8oh9:F, 8oh9:I, 8oh9:L
30 6bk8:f 80 45 0.1630 0.1875 0.3333 3.6 6bk8:k, 7dco:a, 7dco:h, 6exn:k, 6exn:b, 6g90:s, 5gam:b, 5gan:k, 5gan:b, 5gao:k, 5gm6:k, 5gmk:k, 5gmk:s, 3jcm:S, 5lj3:b, 5lj5:b, 5mps:b, 5mq0:k, 5mq0:b, 5nrl:s, 5nrl:k, 5nrl:b, 7oqb:s, 7oqe:s, 5wsg:k, 5wsg:F, 5y88:a, 5y88:h, 5ylz:a, 5ylz:h, 5zwm:P, 5zwm:a, 5zwm:h, 5zwo:a, 5zwo:P
31 5vsu:H 100 62 0.1957 0.1800 0.2903 3.9 5gan:8, 4m7a:H, 4m7a:A, 4m7d:H, 4m7d:A, 5nrl:8, 5zwo:z
32 1m8v:A 72 78 0.1957 0.2500 0.2308 3.9 1m8v:M, 1m8v:C, 1m8v:K, 1m8v:F, 1m8v:H, 1m8v:E, 1m8v:I, 1m8v:D, 1m8v:J, 1m8v:B, 1m8v:L, 1m8v:G, 1m8v:N
33 6r4e:A 663 28 0.1196 0.0166 0.3929 3.9 7ndl:A, 7ndl:B, 6r4e:B, 6r4f:A, 6r4f:B, 6r4g:A, 6r4g:B, 6r4h:A, 6r4h:B, 6r4i:A, 6r4i:B, 6r4j:A, 6r4j:B, 6svm:A, 6svm:B, 6svo:A, 6svo:B, 6svp:A, 6svp:B, 6svq:A, 6svq:B, 2v4m:A, 2v4m:B, 2v4m:C, 2v4m:D, 2zj3:A, 2zj4:A, 6zmj:A, 6zmj:B, 6zmk:A, 6zmk:B
34 4v6i:Bh 130 33 0.1304 0.0923 0.3636 4.4 8aaf:R, 8agt:R, 8agu:R, 8agv:R, 8agw:R, 8agx:R, 8agz:R, 5apn:e, 5apo:e, 7azy:r, 7b7d:La, 8bip:Le, 8bjq:Le, 8bn3:O2, 8bqd:BG, 8bqx:BG, 7bt6:e, 7btb:e, 6c0f:e, 6cb1:e, 8ccs:Q, 8cdl:Q, 8cdr:Q, 8ceh:Q, 8cf5:Q, 8cg8:Q, 8cgn:Q, 8civ:Q, 8cku:Q, 8cmj:Q, 5dat:O2, 5dat:o2, 5dc3:O2, 5dc3:o2, 5dge:O2, 5dge:o2, 5dgf:O2, 5dgf:o2, 5dgv:O2, 5dgv:o2, 8e5t:e, 6elz:e, 6em1:e, 6em3:e, 6em4:e, 6em5:e, 8eub:Ae, 8evp:Ae, 8evq:Ae, 8evr:Ae, 8evs:Ae, 8evt:Ae, 8ewb:Ae, 8ewc:Ae, 5fci:O2, 5fci:o2, 5fcj:O2, 5fcj:o2, 6ft6:e, 5gak:g, 6gq1:e, 6gqb:e, 6gqv:e, 5h4p:e, 6hd7:g, 8hfr:eH, 6hhq:AF, 6hhq:DG, 5i4l:O2, 5i4l:o2, 6i7o:BG, 6i7o:YG, 3j6x:72, 3j6y:72, 3j77:82, 3j78:82, 3jct:e, 5jcs:e, 5juo:JA, 5jup:JA, 5jus:JA, 5jut:JA, 5juu:JA, 8k2d:Le, 8k82:Le, 5lyb:O2, 5lyb:o2, 5m1j:e5, 6m62:e, 5mc6:BG, 5mei:AF, 5mei:DG, 7mpi:Ae, 7mpj:Ae, 6n8j:e, 6n8k:e, 6n8l:e, 6n8m:r, 6n8n:r, 6n8o:r, 7n8b:Ae, 7nac:e, 5ndg:O2, 5ndg:o2, 5ndv:O2, 5ndv:o2, 5ndw:O2, 5ndw:o2, 7nrc:Lg, 7nrd:Lg, 5obm:O2, 5obm:o2, 7of1:e, 7oh3:e, 7ohp:e, 7ohq:e, 7ohr:e, 7ohs:e, 7ohu:e, 7ohv:e, 7ohw:e, 7ohx:e, 7ohy:e, 6oig:e, 5on6:AF, 5on6:DG, 7osa:eL32, 7osm:eL32, 8p8m:RE, 8p8n:RE, 8p8u:RE, 8pfr:RE, 6q8y:BG, 6qik:e, 6qt0:e, 6qtz:e, 7r7a:e, 6r84:g, 6r86:g, 6r87:g, 6ri5:e, 7rr5:Le, 6rzz:e, 6s05:e, 6s47:Ag, 6snt:al, 6sv4:BG, 6sv4:YG, 6sv4:ZG, 6t4q:Le, 5t62:r, 5t6r:r, 6t7i:Le, 6t7t:Le, 6t83:ey, 6t83:P, 5tbw:AF, 5tbw:DG, 6tb3:BG, 5tga:O2, 5tga:o2, 5tgm:O2, 5tgm:o2, 6tnu:BG, 7too:AL32, 7top:AL32, 7u0h:e, 4u3m:O2, 4u3m:o2, 4u3n:O2, 4u3n:o2, 4u3u:O2, 4u3u:o2, 4u4n:O2, 4u4n:o2, 4u4o:O2, 4u4o:o2, 4u4q:O2, 4u4q:o2, 4u4r:O2, 4u4r:o2, 4u4u:O2, 4u4u:o2, 4u4y:O2, 4u4y:o2, 4u4z:O2, 4u4z:o2, 4u50:O2, 4u50:o2, 4u51:O2, 4u51:o2, 4u52:O2, 4u52:o2, 4u53:O2, 4u53:o2, 4u55:O2, 4u55:o2, 4u56:O2, 4u56:o2, 4u6f:O2, 4u6f:o2, 7ug6:e, 7uoo:e, 7uqb:e, 7uqz:e, 7v08:e, 4v4b:B0, 4v7f:d, 4v7h:B0, 4v7r:Bb, 4v7r:Db, 4v88:Be, 4v88:De, 4v8t:e, 4v8y:Be, 4v8z:Be, 8v83:e, 8v84:e, 8v87:e, 4v91:e, 6woo:e, 6xiq:e, 6xir:e, 8y0u:Le, 6ylg:e, 6ylh:e, 6ylx:e, 6yly:e, 5z3g:i, 7z34:e, 6z6j:Le, 6z6k:Le, 7zpq:Bd, 7zrs:Bd, 7zs5:Bf, 7zuw:Bd, 7zux:Ed, 7zw0:Lh
35 5it7:ee 122 33 0.1304 0.0984 0.3636 4.8 6uz7:Be
36 8ro0:n 77 59 0.1630 0.1948 0.2542 5.2 8ro0:g, 8ro1:g
37 1ukm:B 124 65 0.2391 0.1774 0.3385 5.7
38 8eth:e 124 37 0.1413 0.1048 0.3514 7.0 8esq:e, 8esr:e, 8etc:e, 8etg:e, 8eti:e, 8etj:e, 8eug:e, 8eui:e, 8eup:e, 8euy:e, 8ev3:e
39 4v8m:BT 199 32 0.1196 0.0553 0.3438 7.7 8ova:BT, 8ove:BT, 5t5h:T

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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