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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
EKPSPLLVGREFVRQYYTLLNQAPDLHRFYGKNSSYVHGGLDKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHATLN
DGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVF

The query sequence (length=131) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5fw5:A 139 135 1.0000 0.9424 0.9704 1.41e-93 4fcm:A, 4fcm:B, 7suo:A, 7suo:B, 6ta7:D, 6ta7:E, 6ta7:F, 8th1:A, 8th1:B, 8th1:C, 8th1:D, 8th5:A, 8th5:C, 8th5:F, 8th5:B, 8th5:E, 8th5:D, 8th6:D, 8th6:C, 8th6:B, 8th6:A, 8th7:A, 8th7:B, 8v1l:A, 8v1l:B, 8v1l:C, 8v1l:D, 8v1l:E, 8v1l:F, 7xhf:A, 7xhf:B, 7xhg:B, 7xhg:C, 7xhg:D
2 8th5:I 119 131 0.8855 0.9748 0.8855 1.27e-75
3 5drv:A 131 132 0.8015 0.8015 0.7955 2.16e-73
4 3ujm:A 117 123 0.5802 0.6496 0.6179 3.50e-47 3ujm:B
5 1gyb:B 122 78 0.2366 0.2541 0.3974 4.77e-07 1gyb:D, 1gyb:C
6 7ye1:D 1144 29 0.0916 0.0105 0.4138 0.71 7ye2:D
7 8ro2:L2 369 53 0.1221 0.0434 0.3019 1.2 6id0:U, 6id1:U
8 6uel:A 1333 61 0.1603 0.0158 0.3443 1.9 6uel:B
9 7f0r:D 1339 29 0.0992 0.0097 0.4483 2.5 7vf9:D, 7xl3:D, 7xl4:D, 7xya:D, 7xyb:D
10 8sy7:J 1052 19 0.0763 0.0095 0.5263 3.2 8sy5:J
11 4jk1:D 1160 19 0.0763 0.0086 0.5263 3.2 4jk1:I, 4jk2:D, 4jk2:I, 4kmu:D, 4kmu:I, 4kn4:D, 4kn4:I, 4kn7:D, 4kn7:I, 4mex:D, 4mex:J, 4mey:D, 4mey:J, 4s20:D, 4zh3:D, 4zh4:D
12 5ipl:D 1173 19 0.0763 0.0085 0.5263 3.2 6byu:D, 6byu:J, 6cux:D, 6cux:J, 8hkc:F, 8igr:J, 8igs:J, 4ljz:D, 4lk1:D, 6pst:J, 4s20:I, 5uac:D, 5uac:J, 5uag:D, 5uag:J, 5uah:D, 5uah:J, 5uaj:D, 5uaj:J, 5ual:D, 5ual:J, 5uaq:D, 5uaq:J, 6vjs:D, 6vjs:I, 5vsw:D, 5vsw:J, 5w1s:D, 5w1s:J, 5w1t:D, 5w1t:J, 4xsx:D, 4xsy:D, 4xsz:D, 4yfk:D, 4yfk:J, 4yfn:D, 4yfn:J, 4yfx:D, 4yfx:J, 4yg2:D, 4yg2:J, 4zh2:D
13 6j9f:D 1215 19 0.0763 0.0082 0.5263 3.2 6j9e:D
14 6n61:D 1239 19 0.0763 0.0081 0.5263 3.2 6n60:D, 6n62:D, 4xsx:J, 4xsy:J, 4xsz:J
15 6kj6:D 1265 19 0.0763 0.0079 0.5263 3.2
16 8sy6:J 1269 19 0.0763 0.0079 0.5263 3.2
17 7yp9:D 1285 19 0.0763 0.0078 0.5263 3.2
18 6awc:04 1345 19 0.0763 0.0074 0.5263 3.2 6b6h:D, 7c17:D, 8egb:J, 6flp:D, 6flq:D, 8fvr:G, 8fvw:G, 6gfw:D, 6gh5:D, 4jkr:D, 4jkr:J, 6ldi:D, 4ljz:J, 4lk0:D, 4lk0:J, 4lk1:J, 4llg:D, 4llg:J, 7m8e:D, 7mkd:J, 7mke:J, 7mki:J, 7mkj:J, 7mkq:D, 7n4e:D, 6omf:D, 6p18:D, 6p19:D, 6p1k:J, 6pb4:D, 6pb5:D, 6pb6:D, 8pbl:G, 6pmi:D, 6pmj:D, 7py3:D, 7pyj:D, 7pyk:D, 8re4:D, 8rea:D, 8reb:D, 8rec:D, 8red:D, 8ree:D, 8to6:J, 8to8:J, 8toe:J, 7ubm:D, 7ubn:D, 5ui8:J, 7uwe:J, 7uwh:J, 5vt0:J, 7vwy:D, 7vwz:D, 7w5w:D, 7w5x:D, 7w5y:D, 6xas:J, 6xav:J, 6xh7:D, 6xh8:D, 6xl5:D, 6xlj:D, 6xll:D, 6xlm:D, 6xln:D, 7xui:J, 8y6u:D, 7ypb:D, 4zh2:J, 4zh3:J, 4zh4:J, 6ztj:CD, 6ztl:CD, 6ztm:CD, 6ztn:CD, 6zto:CD, 6ztp:CD, 6zu1:CD
19 5my1:Y 1372 19 0.0763 0.0073 0.5263 3.2 8aby:D, 8abz:D, 8ac0:D, 8ac1:D, 8ac2:D, 8acp:D, 7adb:Y, 7adc:Y, 7add:Y, 7ade:Y, 8ad1:D, 6alf:J, 6alg:J, 6alh:J, 6asx:J, 7bef:D, 7beg:D, 6bjs:J, 6c6s:J, 6c6t:J, 6c6u:J, 6c9y:D, 7c97:D, 6ca0:D, 7chw:D, 7d7c:D, 7d7d:D, 7dy6:D, 8e3f:B, 8e5k:B, 8e5o:B, 8e6x:B, 8e6z:B, 8eg7:J, 8eg8:J, 8eh8:J, 8eh9:J, 8eha:J, 8ehf:J, 8ehi:J, 8f1i:J, 8f1j:J, 8f1k:J, 8f3c:J, 8fix:D, 8fiy:D, 8ftd:J, 8g00:J, 8g1s:J, 8g2w:J, 8g4w:J, 8g7e:J, 8g8z:J, 6gov:Y, 5ipm:D, 5ipn:D, 3iyd:D, 6jbq:D, 6jnx:D, 8jo2:D, 6k4y:D, 8k58:D, 8k5a:D, 7khb:D, 7khc:D, 7khe:D, 7khi:D, 3lu0:D, 7mkn:D, 7mko:D, 7mkp:D, 5ms0:D, 6n4c:D, 6n57:J, 6n58:J, 5nwt:D, 6oul:J, 8pdy:J, 8pen:J, 8pfg:J, 8pfj:J, 8ph9:J, 8phk:J, 8pib:J, 8pid:J, 8pil:J, 8pim:J, 6psq:J, 6psr:J, 6pss:J, 6psu:J, 6psv:J, 6psw:J, 7py0:D, 7py1:D, 7py5:D, 7py6:D, 7py7:D, 7py8:D, 7q0j:D, 7q0k:D, 6rh3:D, 6ri7:D, 6ri9:D, 6rin:D, 6rip:D, 7szj:D, 7szk:D, 8to1:J, 8tom:J, 6tqn:Y, 6tqo:Y, 8u3b:D, 8upo:AE, 8upr:AE, 8uql:AE, 8uqm:AE, 8uqp:AE, 8ur0:AE, 8urh:AE, 8uri:AE, 8urx:AE, 8ury:AE, 6utv:DDD, 6utw:DDD, 6utx:DDD, 6uty:DDD, 6utz:DDD, 6uu0:DDD, 6uu1:DDD, 6uu2:DDD, 6uu3:DDD, 6uu4:DDD, 6uu5:DDD, 6uu6:DDD, 6uu7:DDD, 6uu8:DDD, 6uu9:DDD, 6uua:DDD, 6uub:DDD, 6uuc:DDD, 6vu3:AE, 6vyq:AE, 6vyr:AE, 6vys:AE, 6vyt:AE, 6vyu:AE, 6vyw:AE, 6vyx:AE, 6vyy:AE, 6vyz:AE, 6vz2:AE, 6vz3:AE, 6vz5:AE, 6vz7:AE, 6vzj:AE, 6wmu:D, 6x26:J, 6x2f:J, 6x2n:J, 6x43:J, 6x4w:J, 6x4y:J, 6x50:J, 6x6t:AE, 6x7f:AE, 6x7k:AE, 6x9q:AE, 6xdq:AE, 6xdr:AE, 6xgf:AE, 6xii:AE, 6xij:AE, 6xl9:D, 7xue:J, 7xug:J, 4yln:D, 4yln:J, 4yln:P, 4ylo:D, 4ylo:J, 4ylo:P, 4ylp:D, 4ylp:J, 4ylp:P, 7ypa:D, 6z9p:Y, 6z9q:Y, 6z9r:Y, 6z9s:Y, 6z9t:Y
20 8x6f:D 1176 22 0.0840 0.0094 0.5000 3.4 8x6g:D
21 3m7n:E 248 61 0.1603 0.0847 0.3443 5.9 3m7n:F, 3m7n:D, 3m85:F, 3m85:D, 3m85:E
22 8e7f:A 614 34 0.0992 0.0212 0.3824 6.8
23 8txo:J 1162 25 0.0840 0.0095 0.4400 9.1
24 6dcf:D 1176 29 0.0840 0.0094 0.3793 9.2 6vvv:D
25 6vvt:D 1200 29 0.0840 0.0092 0.3793 9.2
26 6z11:D 1254 29 0.0840 0.0088 0.3793 9.3 6ccv:D, 6eyd:D, 6f6w:D, 5tw1:D, 5vi5:D, 5vi8:D, 6vvs:D
27 2pnz:A 236 25 0.0840 0.0466 0.4400 9.3 2po0:A, 2po1:A, 2po2:A
28 6cce:D 1195 29 0.0840 0.0092 0.3793 9.4
29 8i23:D 1154 22 0.0763 0.0087 0.4545 9.5 8i24:D
30 8ej3:D 1281 29 0.0840 0.0086 0.3793 9.5 6bzo:D, 6c04:D, 6c05:D, 6c06:D, 6dv9:D, 6dvb:D, 6dvc:D, 6dvd:D, 6dve:D, 8e74:D, 8e79:D, 8e82:D, 8e8m:D, 8e95:D, 6edt:D, 6ee8:D, 6eec:D, 8ehq:D, 8eoe:D, 8eof:D, 8eos:D, 8eot:D, 8exy:D, 6fbv:D, 8hih:D, 6jcx:D, 6jcy:D, 7kif:D, 7kim:D, 7kin:D, 6kon:D, 6koo:D, 6kop:D, 6koq:D, 6m7j:D, 7p5x:AD, 7pp4:d, 8q3i:D, 7q4u:D, 7q4u:J, 7q4u:P, 7q4u:W, 7q4u:CA, 7q4u:IA, 7q4u:OA, 7q4u:UA, 7q59:D, 7q59:d, 7rwi:D, 6tye:D, 6tyf:D, 6tyg:D, 7u22:D, 5uh5:D, 5uh6:D, 5uh8:D, 5uh9:D, 5uha:D, 5uhb:D, 5uhc:D, 5uhd:D, 5uhe:D, 5uhf:D, 5uhg:D, 6vvx:D, 6vvy:D, 6vvz:D, 6vw0:D, 6yxu:D, 6yys:D, 7z8q:d, 7zf2:D, 5zx2:D, 5zx3:D
31 3lpp:B 869 27 0.0840 0.0127 0.4074 9.6 3lpp:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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