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BioLiP
>protein
EIEVIENGIKKKEKLSDLFNKYYAGFQIGEKHYAFPPDLYVYDGERWVKVYSIIKHETETDLYEINGITLSANHLVLSKG

The query sequence (length=80) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 5oxw:C 80 80 1.0000 1.0000 1.0000 2.10e-54 5oxw:B, 5oxw:D, 5oxw:A, 5oxx:A
2 1kao:A 167 34 0.1250 0.0599 0.2941 0.78 2rap:A, 3rap:R, 3rap:S
3 6kyk:C 169 37 0.1500 0.0710 0.3243 0.79 3brw:D, 1c1y:A, 7c7i:A, 7c7i:B, 7c7j:A, 7c7j:B, 4dxa:A, 1gua:A, 4hdo:B, 4hdq:B, 5kho:C, 5kho:D, 3kuc:A, 4kvg:A, 4kvg:C, 6kyk:D, 6kyk:E, 6kyk:F, 4m8n:E, 4m8n:F, 4m8n:G, 4m8n:H, 6oq3:B, 6oq4:B, 8su8:B, 8t09:B, 8t7v:B, 6uzk:B, 3x1w:A, 3x1x:A, 3x1y:A, 3x1z:A, 3x1z:B
4 4kps:A 324 27 0.1375 0.0340 0.4074 5.5 4kps:E
5 1npi:A 61 28 0.1250 0.1639 0.3571 5.9
6 2z9i:A 284 20 0.1500 0.0423 0.6000 6.0 2z9i:B, 2z9i:C
7 6hzf:A 860 34 0.1500 0.0140 0.3529 8.2 6hze:A, 6hze:B, 6hzf:B, 6hzg:A
8 1br6:A 268 22 0.1125 0.0336 0.4091 8.4 1br5:A, 5ddz:A, 3ej5:X, 4esi:A, 5gu4:A, 5gu4:B, 3hio:A, 4huo:X, 4hup:X, 4hv3:A, 4hv7:X, 8i7p:A, 1ifs:A, 1ifu:A, 1il3:A, 1il4:A, 1il5:A, 1il9:A, 1j1m:A, 7kc9:D, 7kd0:A, 7kdm:D, 7kdu:A, 4lgr:A, 7mln:A, 7mlo:A, 7mlo:B, 7mlp:A, 7mlt:A, 4mx1:A, 4mx5:X, 1obt:A, 6obg:B, 6ocd:A, 6ocd:C, 2p8n:A, 2pjo:A, 3px8:X, 3px9:X, 4q2v:A, 2r2x:A, 3rti:A, 3rtj:A, 1rzo:A, 1rzo:C, 8t9v:A, 8tab:A, 8tad:A, 6urw:A, 6urx:A, 6ury:A, 7xzs:A, 7xzt:A, 7xzu:A, 7xzw:A, 7y02:A, 7y03:A, 7y05:A, 7y06:A, 7y07:A, 7y08:A, 7y4k:A, 7y4m:A, 4z9k:A
9 2kwi:A 178 38 0.1750 0.0787 0.3684 9.8 2ke5:A, 6zqt:A, 6zqt:B, 6zrn:A, 6zrn:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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