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BioLiP
>protein
EHIPFSHTRYPEQEMRMRSQEFYELLNKRRSVRFISSEHVPMEVIENVIKAAGTAPSGAHTEPWTFVVVKDPDMKHKIRE
IIEEEEEIKEYLDTAPVLILIFKQVYNEISVSIAAGLLLAALQNAGLVTVTTTPLNAGPRLRVLLGRPSHEKLLVLLPVG
YPSRDATVPDLKRKALDQIMVTVHH

The query sequence (length=185) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3gb5:A 185 185 0.9892 0.9892 0.9892 6.76e-135 3to0:A, 3to0:B
2 3tnz:A 222 220 1.0000 0.8333 0.8409 1.19e-126 3gfd:A, 3gfd:B, 3gh8:A, 3gh8:B, 3gh8:C, 3gh8:D, 3gh8:E, 3gh8:F, 3gh8:G, 3gh8:H, 3tnz:B
3 4ttb:A 189 188 0.8649 0.8466 0.8511 1.04e-112 4ttb:B
4 4ttc:A 220 219 0.8595 0.7227 0.7260 8.88e-106 4ttc:B, 4ttc:C, 4ttc:D, 4ttc:E, 4ttc:F, 5yak:A, 5yak:F, 5yak:B, 5yak:C, 5yak:D, 5yak:E
5 5ko7:B 200 198 0.4757 0.4400 0.4444 6.21e-54
6 5ko8:B 218 219 0.4757 0.4037 0.4018 3.97e-49 5ko7:A, 5ko8:A, 5krd:A, 5krd:B
7 6pz0:A 185 168 0.3297 0.3297 0.3631 6.86e-24 6pz0:B, 6q1b:A, 6q1b:B, 6q1l:A, 6q1l:B, 6tyk:A, 6tyk:B
8 4dn2:A 191 191 0.3405 0.3298 0.3298 4.63e-13 4dn2:B
9 3eo8:A 219 110 0.2108 0.1781 0.3545 7.21e-12 3eo8:B, 3eo8:C, 3eo8:D, 3eo8:E, 3eo8:F
10 8cqt:B 164 147 0.2216 0.2500 0.2789 8.91e-11 8cqt:A
11 4g8s:A 182 184 0.3135 0.3187 0.3152 2.31e-09 4g8s:B
12 3gbh:B 213 91 0.1568 0.1362 0.3187 7.25e-09 3gbh:A, 3gbh:C, 3gbh:D
13 4eo3:A 321 164 0.2486 0.1433 0.2805 9.93e-09 4eo3:B
14 1nox:A 200 83 0.1405 0.1300 0.3133 1.27e-08
15 3e10:B 167 152 0.2324 0.2575 0.2829 1.62e-08 3e10:A
16 3ek3:A 187 191 0.2541 0.2513 0.2461 3.23e-08
17 1zch:A 249 184 0.2703 0.2008 0.2717 6.75e-08
18 3kwk:A 168 139 0.2054 0.2262 0.2734 1.64e-07
19 3m5k:A 168 156 0.2378 0.2619 0.2821 2.37e-07 3m5k:B
20 3e39:A 175 104 0.1730 0.1829 0.3077 5.13e-07 3e39:B
21 5j62:B 209 115 0.1622 0.1435 0.2609 5.98e-06 5j62:A
22 3qdl:A 178 179 0.2378 0.2472 0.2458 6.21e-06 3qdl:B, 3qdl:C, 3qdl:D
23 3gfa:A 197 54 0.0973 0.0914 0.3333 1.01e-05 3gfa:B
24 5j6c:A 173 151 0.2054 0.2197 0.2517 2.69e-05 5j6c:B
25 3gag:A 206 84 0.1243 0.1117 0.2738 2.95e-05 3gag:B, 3gag:C, 3gag:D
26 7tmf:B 183 165 0.2108 0.2131 0.2364 6.77e-05 7tmf:A, 7tmg:A, 7tmg:B
27 3ge5:A 176 170 0.2000 0.2102 0.2176 7.38e-05 3ge5:B
28 4xoq:A 204 57 0.1027 0.0931 0.3333 1.97e-04 4xoo:A, 4xoo:B, 4xoo:C, 4xoo:D, 4xoq:B, 4xoq:C, 4xoq:D
29 2wzv:B 223 52 0.1081 0.0897 0.3846 2.49e-04 2wzv:A, 2wzw:A, 2wzw:B
30 4qlx:A 217 101 0.1297 0.1106 0.2376 3.72e-04 4qlx:B, 4qly:A, 4qly:B, 4qly:C, 4qly:D
31 6wt2:A 221 84 0.1081 0.0905 0.2381 3.75e-04 6wt2:B, 6wt2:C, 6wt2:D
32 3bem:B 210 105 0.1568 0.1381 0.2762 4.11e-04 3bem:A
33 2isj:A 219 191 0.2541 0.2146 0.2461 4.32e-04 2isj:B, 2isj:C, 2isj:D, 2isj:E, 2isj:F, 2isj:G, 2isj:H, 2isk:A, 2isk:B, 2isk:C, 2isk:D, 2isk:E, 2isk:F, 2isk:G, 2isk:H, 2isl:A, 2isl:B, 2isl:C, 2isl:D, 2isl:E, 2isl:F, 2isl:G, 2isl:H
34 3gr3:A 226 49 0.0811 0.0664 0.3061 5.79e-04 3gr3:B
35 7s14:B 223 57 0.0811 0.0673 0.2632 8.74e-04 7ldq:A, 7rzl:A, 7rzl:B, 7rzp:A, 7rzp:B, 7s14:A, 7s14:C, 7s14:D, 7s1a:A, 7s1a:B, 7t2z:A, 7t2z:B, 7t33:A, 7t33:B
36 8uc3:A 180 59 0.0919 0.0944 0.2881 0.002 8uc3:B
37 7jh4:A 223 70 0.1081 0.0897 0.2857 0.002 7jh4:B, 7jh4:C, 7jh4:D, 7jh4:E
38 2b67:A 201 82 0.1243 0.1144 0.2805 0.002 2b67:B, 2b67:C, 2b67:D
39 8qyg:B 225 79 0.1189 0.0978 0.2785 0.004 8q5g:A, 8q5g:B, 8qyg:A
40 3bm1:A 177 168 0.2000 0.2090 0.2202 0.005 3bm1:B
41 3ge6:A 210 56 0.0865 0.0762 0.2857 0.006 3ge6:B
42 5hei:A 246 117 0.1892 0.1423 0.2991 0.009 5hei:B, 5hei:C, 5hei:D, 5hei:E, 5hei:F, 5hei:G, 5hei:H
43 7dp0:A 223 46 0.0919 0.0762 0.3696 0.010 7dp0:B, 7dp1:A, 7dp1:B, 7dp2:A, 7dp2:B
44 2i7h:A 187 157 0.1892 0.1872 0.2229 0.099 2i7h:B, 2i7h:C, 2i7h:D
45 2hay:D 222 56 0.0919 0.0766 0.3036 0.13 2hay:A, 2hay:B, 2hay:C
46 2fre:A 200 78 0.1189 0.1100 0.2821 0.27 2fre:B
47 1v5y:A 217 58 0.0703 0.0599 0.2241 0.63 1v5y:B, 1v5z:A, 1v5z:B, 1vfr:A, 1vfr:B
48 5hdj:B 248 52 0.0649 0.0484 0.2308 0.70 5hdj:A
49 8dil:A 175 121 0.1405 0.1486 0.2149 0.76 8dil:B, 8dil:C, 8dil:D, 8dil:E, 8dil:F
50 3e1t:A 437 25 0.0649 0.0275 0.4800 1.8
51 3ffz:A 1246 106 0.1514 0.0225 0.2642 1.9 3d3x:A, 3d3x:B, 3ffz:B, 7ovw:AAA, 7ovw:BBB, 1t3a:A, 1t3a:B, 1t3c:A, 1t3c:B, 7uib:D, 7uib:A, 1zkw:A, 1zkw:B, 1zkx:A, 4zkt:A, 4zkt:C, 4zkt:E, 1zl6:A, 1zn3:A
52 7k84:A 793 106 0.1514 0.0353 0.2642 2.2
53 4czo:A 367 39 0.0865 0.0436 0.4103 2.6 4czn:A, 4czp:A, 4czq:A, 4czr:A
54 4aub:B 335 56 0.0919 0.0507 0.3036 3.1 4aub:A, 4aub:C, 4aub:G, 3n6q:D
55 4aub:F 298 56 0.0919 0.0570 0.3036 3.1 4aub:E, 4aub:H
56 1ds7:A 217 85 0.1027 0.0876 0.2235 4.0 8c5e:A, 8c5e:B, 8c5f:A, 8c5f:B, 8c5p:A, 8c5p:B, 8ccv:A, 8ccv:B, 8cj0:A, 8cj0:B, 1ds7:B, 1icr:A, 1icr:B, 1icu:A, 1icu:B, 1icu:C, 1icu:D, 1icv:A, 1icv:B, 1icv:C, 1icv:D, 1idt:A, 1idt:B, 8og3:A, 8og3:B, 1oo5:A, 1oo5:B, 1oo6:A, 1oo6:B, 1oon:A, 1oon:B, 1ooq:A, 1ooq:B, 8qes:A, 8qes:C, 8qes:B, 8qes:D, 8qpo:A, 8qpo:B, 8qpo:C, 8qpo:G, 8qpo:D, 8qpo:E, 8qpo:F, 8qpo:H, 3x21:A, 3x21:B, 3x21:C, 3x21:D, 3x21:E, 3x21:F, 3x21:G, 3x21:H, 3x21:I, 3x21:J, 3x22:A, 3x22:B, 7x32:A, 7x32:C, 7x32:B, 7x32:H, 7x32:D, 7x32:F, 7x32:E, 7x32:G, 7xww:B, 7xww:A, 7xww:H, 7xww:I, 1yki:A, 1yki:B, 1yki:C, 1yki:D, 1ylr:A, 1ylr:B, 1ylu:A, 1ylu:B
57 6wfq:C 228 32 0.0757 0.0614 0.4375 4.3 6on4:A, 6on4:B, 6wfq:D, 6wg7:C, 6wg7:D, 6wg7:E, 6wg7:G, 6wg7:F, 6wg7:H
58 6czp:A 219 77 0.0973 0.0822 0.2338 5.2 6czp:B, 6czp:C, 6czp:D, 6czp:E, 6czp:F, 6czp:G, 6czp:H, 7uwt:A, 7uwt:B
59 7aor:y 253 29 0.0595 0.0435 0.3793 5.7
60 7a4p:J 41 34 0.0757 0.3415 0.4118 6.6 6zzx:J, 6zzy:J
61 1yfr:A 448 43 0.0919 0.0379 0.3953 7.6 1yfr:B, 1yfs:A, 1yfs:B, 1ygb:A
62 5j8d:A 216 84 0.1027 0.0880 0.2262 7.7 5j8d:B, 5j8d:C, 5j8d:D, 5j8g:A, 5j8g:B, 5j8g:C, 5j8g:D, 1kqb:A, 1kqb:B, 1kqb:C, 1kqb:D, 1kqc:A, 1kqc:B, 1kqc:C, 1kqc:D, 1kqd:A, 1kqd:B, 1kqd:C, 1kqd:D, 1nec:A, 1nec:B, 1nec:C, 1nec:D
63 1bkj:A 230 163 0.1784 0.1435 0.2025 8.3 1bkj:B, 2bkj:A, 2bkj:B
64 3pxv:B 189 59 0.0865 0.0847 0.2712 9.5 3pxv:A, 3pxv:C, 3pxv:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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