Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
EFKINRLNYTPHEYWITQGMGMERPFTGDKWFEKDVGYYHCTVCSTKLFTWDHKFQTPNGMTSFWHHEKNAVKVVENTNG
IQESFINLESTPSQINQNAQKQRVCCSKCQSNLGLVFFDGPPPTFKRFSISSAAIKFIKKEHWENPHLVSRKRKFKLNTE
KEVERKREVLKSQQQDIVANS

The query sequence (length=181) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6z1p:BL 181 181 1.0000 1.0000 1.0000 1.69e-137
2 6q9v:B 145 132 0.2541 0.3172 0.3485 6.15e-18 6q9v:A, 6qa0:A, 6qa0:B
3 6sym:A 135 138 0.2155 0.2889 0.2826 2.03e-17 6sym:B
4 2k8d:A 151 131 0.2431 0.2914 0.3359 3.06e-17
5 3cxk:A 131 136 0.2486 0.3435 0.3309 4.35e-14 3cez:A, 3cez:B, 3cxk:B
6 3hci:A 153 121 0.1989 0.2353 0.2975 6.81e-12 3hci:B, 3hcj:A, 3hcj:B
7 6tr8:A 136 140 0.2210 0.2941 0.2857 2.58e-08
8 3mao:A 105 106 0.1657 0.2857 0.2830 1.36e-04
9 7e43:B 324 130 0.1934 0.1080 0.2692 3.82e-04 7e43:A
10 3hch:A 145 150 0.2265 0.2828 0.2733 5.50e-04 3hch:B
11 3e0m:C 313 134 0.1934 0.1118 0.2612 0.012 3e0m:A, 3e0m:B
12 6lod:E 157 57 0.0829 0.0955 0.2632 0.63 6loe:E
13 4or9:A 399 66 0.0994 0.0451 0.2727 4.2 4ora:A, 4orc:A
14 6tz8:D 373 41 0.0718 0.0349 0.3171 4.6 6tz8:A
15 7evo:D 200 58 0.0994 0.0900 0.3103 4.8 8hk1:D, 6n3e:A, 6n3f:C, 6nsx:A
16 2qt6:A 498 53 0.0718 0.0261 0.2453 5.8 2qt6:B
17 3e02:A 310 39 0.0884 0.0516 0.4103 5.8
18 1kya:A 499 53 0.0718 0.0261 0.2453 6.0 1kya:B, 1kya:C, 1kya:D
19 3div:A 499 53 0.0718 0.0261 0.2453 6.0 3fpx:A, 2h5u:A, 5ldu:A, 3pxl:A, 3v9c:A
20 4a2e:A 496 53 0.0663 0.0242 0.2264 7.7 4a2d:A, 4a2f:A, 4a2g:A, 4a2h:A, 5a7e:A, 5anh:A, 5anh:B, 5anh:C, 6h5y:A, 6h5y:B, 2hrg:A, 2hrh:A, 4jhu:A, 4jhv:A
21 6bni:A 502 50 0.0884 0.0319 0.3200 9.1 6bni:B, 6c86:A, 6c86:B, 5eln:A, 5eln:B, 5eln:C, 5eln:D, 5elo:A, 5elo:B, 5elo:C, 5elo:D, 6hcw:A, 6hcw:B, 7zog:A, 7zog:B, 7zog:C, 7zog:D
22 4nes:A 362 93 0.1215 0.0608 0.2366 9.9

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218