Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
EELYEVERIVDKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEEYIHDFNRRH

The query sequence (length=56) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7n27:A 57 56 1.0000 0.9825 1.0000 1.75e-36 7n27:D, 7n27:B, 7n27:C, 7n27:E, 7n27:F
2 6v41:AAA 61 53 0.6964 0.6393 0.7358 9.48e-27
3 6v2d:G 64 55 0.7321 0.6406 0.7455 1.25e-25 5jjz:A, 7slw:A, 7slw:B, 7slw:C, 7slw:D, 7slw:E, 7slw:F, 8sp6:A, 8sp6:B, 8sp6:C, 8sp6:D, 8sp6:E, 8sp6:F, 6v2d:I, 6v2d:K, 6v2d:A, 6v2d:C, 6v2d:E, 6v2h:A, 6v2h:C, 6v2h:E, 6v2h:G, 6v2h:I, 6v2h:K, 6v3n:A, 6v3n:B, 6v8w:A, 6v8w:B, 6v8w:C, 6v8w:D, 6v8w:E, 6v8w:F, 6v8w:G, 6v8w:H, 6v8w:I, 6v8w:J, 6v8w:K, 6v8w:L, 6v8w:M, 6v8w:N, 6v8w:O, 6v8w:P, 6v8w:Q, 6v8w:R, 6v8w:S, 6v8w:T, 6v8w:U, 6v8w:V, 6v8w:W, 6v8w:X, 6v8w:Y, 6v8w:Z
4 3qo2:A 61 55 0.5179 0.4754 0.5273 3.95e-15 7m5u:A, 3qo2:D, 3qo2:B, 3qo2:C, 3r93:A, 3r93:D, 3r93:B, 3r93:C, 3svm:A, 6v2s:A, 6v2s:B
5 2rsn:A 75 45 0.4286 0.3200 0.5333 1.08e-11 3g7l:A
6 2rvn:A 83 53 0.4286 0.2892 0.4528 3.10e-11
7 3tzd:A 58 49 0.3929 0.3793 0.4490 6.73e-10 3dm1:A, 3dm1:C, 3dm1:G, 3dm1:E, 2l11:A
8 4u68:A 64 49 0.3571 0.3125 0.4082 7.14e-10 4quf:A, 4quf:B, 4quf:C, 4quf:D, 4quf:E, 4quf:F, 4u68:B, 4u68:C
9 8uxq:A 170 51 0.4107 0.1353 0.4510 8.77e-10 3fdt:A
10 1guw:A 73 40 0.3750 0.2877 0.5250 9.06e-10 6d07:A, 6d07:B, 6d08:A, 6d08:B
11 5ejw:A 80 44 0.3750 0.2625 0.4773 2.25e-09 5epj:A, 2kvm:A, 2l12:A, 2l1b:A, 4mn3:A, 8sii:A, 8sii:B, 6v2r:A, 4x3k:A, 4x3k:B, 4x3s:B, 4x3s:A, 4x3t:A, 4x3t:B, 4x3t:C, 4x3t:D, 4x3t:E, 4x3t:F, 4x3u:A, 4x3u:B
12 6asz:A 53 49 0.3750 0.3962 0.4286 2.62e-09 6at0:A, 1kna:A, 1kne:A, 6mha:A, 1q3l:A
13 5epk:A 54 44 0.3393 0.3519 0.4318 8.55e-09 3h91:A, 3h91:B
14 5epl:B 58 54 0.3750 0.3621 0.3889 1.33e-08 5epl:A
15 3gv6:A 56 45 0.3393 0.3393 0.4222 2.22e-08 3i90:A, 3i90:B
16 5eq0:A 55 45 0.3214 0.3273 0.4000 3.29e-08 3i91:A
17 7vrf:A 61 49 0.3571 0.3279 0.4082 1.03e-07 7vrf:B
18 1pfb:A 55 42 0.3393 0.3455 0.4524 5.93e-07 1pdq:A
19 7vyw:A 47 40 0.3214 0.3830 0.4500 6.53e-07
20 4fsx:A 680 29 0.2500 0.0206 0.4828 1.18e-04 4fsx:B, 4ft2:B, 4ft2:A
21 7ubu:A 708 29 0.2500 0.0198 0.4828 1.24e-04 4ft4:A, 4ft4:B
22 5e4w:C 105 38 0.3036 0.1619 0.4474 0.003 5e4w:D, 5e4x:A
23 5e4w:C 105 42 0.3393 0.1810 0.4524 0.60 5e4w:D, 5e4x:A
24 3ui2:A 234 39 0.2321 0.0556 0.3333 0.014 3dep:A, 2hug:A
25 3ui2:A 234 42 0.3393 0.0812 0.4524 0.38 3dep:A, 2hug:A
26 6guu:B 204 37 0.2321 0.0637 0.3514 0.030 6guu:A
27 2b2w:A 177 45 0.3214 0.1017 0.4000 0.057 5afw:A, 2b2t:A, 2b2u:A, 2b2v:A, 4nw2:A, 4nw2:C, 4o42:A
28 6ryr:W 708 34 0.1964 0.0155 0.3235 0.059 2l75:A, 1mm2:A, 6q3m:D, 6ryu:W, 6ryu:V
29 6q3m:C 219 38 0.2143 0.0548 0.3158 0.066 6q3m:A, 6q3m:B
30 6g0l:M 855 60 0.3036 0.0199 0.2833 0.14 7nkx:W, 5o9g:W
31 7tn2:W 895 60 0.3036 0.0190 0.2833 0.15 9gd2:W, 9gd3:W
32 6ftx:W 878 60 0.3036 0.0194 0.2833 0.15 6g0l:W, 5j70:A, 5j70:B, 3mwy:W, 3ted:A
33 9gd1:W 849 60 0.3036 0.0200 0.2833 0.15
34 8xqw:M 390 25 0.1607 0.0231 0.3600 0.40 8xqx:M
35 7ef1:A 148 33 0.1964 0.0743 0.3333 0.46 7eez:A, 7ef0:A, 7ef0:B, 7ef1:B, 7ef2:A, 7ef2:B, 7ef3:A, 7ef3:B
36 4iup:B 134 33 0.1964 0.0821 0.3333 0.85 4iup:A, 4iuq:B, 4iuq:A, 4iur:B, 4iur:A, 4iut:B, 4iut:A, 4iuu:B, 4iuu:A, 4iuv:A, 4iuv:B
37 8cuy:A 1016 49 0.2500 0.0138 0.2857 1.3
38 8hub:B 545 25 0.1964 0.0202 0.4400 1.4
39 8hub:C 572 25 0.1964 0.0192 0.4400 1.8 8hub:D
40 8hu6:B 629 25 0.1964 0.0175 0.4400 1.8 8hu6:A, 8hu6:C, 8hu6:D
41 3oa6:A 84 38 0.2143 0.1429 0.3158 1.9 3oa6:B
42 8u5y:B 700 33 0.2143 0.0171 0.3636 2.1 8u5y:A, 8u5y:C, 8u61:B, 8u61:A, 8u61:C
43 1m1j:C 390 24 0.1607 0.0231 0.3750 2.4 1m1j:F
44 8jpg:A 469 52 0.2679 0.0320 0.2885 2.9 3a4u:A, 4gkx:A, 4gkx:B, 4gkx:C, 4gkx:D, 4gkx:E, 4gkx:F, 4gky:A, 8jp4:A, 8jp4:B, 8jp4:E, 8jp4:F, 8jp5:A, 8jp5:B, 8jp5:E, 8jp5:F, 8jp6:A, 8jp6:B, 8jp6:E, 8jp6:F, 8jp7:A, 8jp7:B, 8jp7:E, 8jp7:F, 8jp8:A, 8jp8:B, 8jp8:E, 8jp8:F, 8jp9:A, 8jp9:B, 8jp9:E, 8jp9:F, 8jpg:B, 8jpg:E, 8jpg:F, 3lcp:A, 3lcp:B, 3whu:A, 3wnx:A, 4ygc:A, 4ygc:C, 4ygc:E, 4ygc:G, 4ygd:A, 4ygd:C, 4ygd:E, 4ygd:G, 4yge:A
45 8hub:A 388 30 0.2143 0.0309 0.4000 3.3
46 6s47:Bi 952 38 0.2500 0.0147 0.3684 3.7
47 7w6b:A 782 50 0.2857 0.0205 0.3200 4.9 7vcn:C, 7vcn:A, 7vcn:D, 7vcn:B
48 2og6:A 323 22 0.1786 0.0310 0.4545 5.1 2og7:A
49 3dh4:A 512 24 0.1964 0.0215 0.4583 5.8 3dh4:B, 3dh4:C, 3dh4:D
50 4cjn:A 642 24 0.1429 0.0125 0.3333 6.1 4bl3:A, 4bl3:B, 4cjn:B, 4cpk:A, 4cpk:B, 4dki:A, 4dki:B, 6h5o:B, 5m18:A, 5m18:B, 5m19:A, 5m19:B, 5m1a:A, 5m1a:B, 1mwt:A, 1mwt:B, 1mwu:A, 1mwu:B, 6q9n:A, 3zfz:A, 3zfz:B, 3zg0:A, 3zg0:B, 3zg5:A, 3zg5:B
51 2icy:B 463 45 0.2321 0.0281 0.2889 7.2 2icx:A, 2icx:B, 2icy:A
52 8wmm:B 1212 45 0.2500 0.0116 0.3111 7.9 8iyq:A, 8wmh:A, 8wmm:A, 8wmn:A, 8wmn:B, 8wr4:A
53 8wr4:B 1442 45 0.2500 0.0097 0.3111 8.2

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218