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BioLiP
>protein
EDPEVLFKNKGCVACHAIDTKKVGPAYADVAKKYAGRKDAVDYLAGKIKKGGSGVWGSVPAPPQNVTDAEAKQLAQWILS
IK

The query sequence (length=82) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 5xec:A 82 82 0.9878 0.9878 0.9878 5.09e-55 5xed:A
2 5aur:A 83 82 0.8537 0.8434 0.8537 1.46e-43 2ai5:A, 5aur:C, 5aur:E, 5aur:G, 5aus:A, 5aus:C, 1ayg:A, 3vym:A, 1ynr:A, 1ynr:B, 1ynr:C, 1ynr:D, 4zid:A
3 351c:A 82 82 0.6707 0.6707 0.6707 3.21e-35 451c:A, 1dvv:A, 2exv:A, 2exv:C, 2pac:A, 3x39:A, 3x39:B
4 1cor:A 82 82 0.6098 0.6098 0.6098 9.13e-31 6kq1:A, 6kq1:B
5 1cch:A 82 82 0.5732 0.5732 0.5732 1.03e-28 1fi3:A, 2i8f:A
6 1a56:A 81 78 0.5732 0.5802 0.6026 1.12e-28 1a8c:A, 4jcg:A, 3zow:A, 3zow:B, 3zow:C, 3zow:D, 3zow:E, 3zow:F, 3zow:G, 3zow:H, 3zow:I, 3zow:J, 3zow:K, 3zow:L, 3zow:M, 3zow:N, 3zow:O, 3zow:P, 3zow:Q, 3zow:R, 3zox:A, 3zox:B, 3zox:C, 3zox:D, 3zoy:A, 3zoy:B, 3zoy:C, 3zoy:D
7 5xec:C 80 79 0.5366 0.5500 0.5570 8.16e-26 5xed:C
8 2d0s:A 79 80 0.5244 0.5443 0.5375 4.33e-23
9 3x15:A 87 86 0.3293 0.3103 0.3140 1.10e-08 3x15:G, 3x15:D, 3x15:J, 2zxy:A
10 4xxl:A 92 81 0.3049 0.2717 0.3086 3.48e-07
11 5z25:A 96 43 0.2073 0.1771 0.3953 2.66e-06
12 3cp5:A 116 30 0.1829 0.1293 0.5000 5.29e-04 6cuk:A, 6cun:A
13 8gth:E 105 96 0.3049 0.2381 0.2604 0.004 8gth:A, 8gth:B, 8gth:C, 8gth:F, 8gth:D
14 1w2l:A 97 84 0.2683 0.2268 0.2619 0.004
15 1fj0:A 114 54 0.2439 0.1754 0.3704 0.034 1fj0:B, 1fj0:C, 1fj0:D, 1hh7:A, 1i8o:A, 1i8p:A, 1i8p:B, 1i8p:C, 1i8p:D
16 2b0z:B 108 49 0.1829 0.1389 0.3061 0.052 2b10:B, 2b10:D, 2b11:B, 2b11:D, 2b12:B, 7bbt:A, 7bbt:B, 7bbt:C, 7bbt:D, 2bcn:B, 1chh:A, 1chi:A, 1chj:A, 1cie:A, 1cif:A, 1cig:A, 1cih:A, 5cib:B, 5cib:D, 5cic:B, 5cic:D, 5cid:B, 5cid:D, 5cie:B, 5cie:D, 5cif:B, 5cif:D, 5cig:B, 5cig:D, 5cih:B, 5cih:D, 1crg:A, 1crh:A, 1cri:A, 1crj:A, 1csu:A, 1csv:A, 1csw:A, 1csx:A, 1cty:A, 1ctz:A, 3cx5:W, 6egy:A, 6egy:B, 6egz:A, 6egz:B, 1fhb:A, 2gb8:B, 6gd6:A, 6gd7:A, 6gd8:A, 6gd8:C, 6gd8:B, 6gd8:D, 6gd9:A, 6gda:A, 2hv4:A, 1irv:A, 1irw:A, 2jqr:A, 2jti:B, 5kke:A, 5klu:A, 5klu:B, 5kpf:A, 5kpf:B, 1kyo:W, 5lft:A, 2lir:A, 2lit:A, 1lms:A, 5lyc:A, 5lyc:B, 2mhm:A, 7mri:A, 7mri:C, 7mri:E, 4mu8:A, 4mu8:B, 4n0k:A, 4n0k:B, 2n18:B, 2n18:C, 5ncv:A, 5ncv:B, 1nmi:A, 2orl:A, 4p4q:B, 4p4q:D, 6p41:B, 6p41:D, 6p42:B, 6p42:D, 6p43:B, 2pcc:B, 2pcc:D, 7pr2:A, 7pr2:B, 7pr3:A, 7pr3:D, 7pr3:C, 7pr3:B, 7pr4:A, 4q5p:A, 4q5p:B, 4q5p:C, 4qao:A, 4qao:B, 4qao:C, 1rap:A, 1raq:A, 6rsi:A, 6rsj:A, 6rsk:A, 6rsk:B, 6rsl:A, 6rsl:B, 1s6v:B, 1s6v:D, 6s8y:A, 6suy:A, 6suy:B, 5t7h:A, 5t7h:D, 5t7h:B, 5t7h:C, 5t8w:A, 5t8w:B, 3tyi:A, 3tyi:B, 1u74:B, 1u74:D, 6y0j:A, 6y0j:B, 6y0j:C, 6y0j:D, 1ycc:A, 2ycc:A, 4ye1:A, 4ye1:B, 1yfc:A, 1yic:A
17 6h5l:B 220 81 0.2195 0.0818 0.2222 0.086
18 1hro:A 105 43 0.1829 0.1429 0.3488 0.53 1hro:B
19 3o5c:A 308 11 0.1098 0.0292 0.8182 1.7 3o5c:B, 3o5c:C, 3o5c:D
20 3hq7:A 304 11 0.1098 0.0296 0.8182 2.4
21 3hq6:A 324 11 0.1098 0.0278 0.8182 2.4 3hq6:B, 3hq8:A, 3hq8:B, 3hq9:A, 3hq9:B
22 4n4j:A 497 20 0.1098 0.0181 0.4500 2.5 4n4k:A, 4n4l:A, 4n4m:A, 4rwm:A
23 3a27:A 219 57 0.1951 0.0731 0.2807 5.4
24 2ii1:A 297 66 0.2317 0.0640 0.2879 5.8 2ii1:B, 2ii1:C, 2ii1:D
25 6t5e:A 439 20 0.1098 0.0205 0.4500 5.8
26 4aao:A 303 12 0.0976 0.0264 0.6667 6.6
27 4aam:A 324 12 0.0976 0.0247 0.6667 6.7 4aal:A, 4aal:B, 4aan:A, 4aao:B
28 8xfc:D 517 74 0.2317 0.0368 0.2568 6.8 8wdb:D
29 7jra:A 153 20 0.0976 0.0523 0.4000 7.4 2az5:A, 2az5:B, 2az5:C, 2az5:D, 7jra:B, 7jra:C, 7kp9:A, 7kp9:B, 7kp9:C, 7kpa:A, 7kpa:B, 7kpa:C, 7kpb:A, 7kpb:B, 7kpb:C, 5mu8:A, 5mu8:B, 5mu8:C, 5mu8:D, 5mu8:F, 5mu8:G, 5mu8:H, 5mu8:I, 5mu8:J, 5mu8:K, 5mu8:L, 5mu8:M, 5mu8:N, 5mu8:O, 5mu8:Q, 5mu8:R, 5mu8:S, 5mu8:U, 5mu8:V, 5mu8:W, 5mu8:X, 5mu8:Y, 5mu8:Z, 5mu8:a, 5mu8:b, 5mu8:c, 5mu8:d, 5mu8:e, 5mu8:f, 5mu8:h, 5mu8:i, 5mu8:j, 5mu8:l, 5mu8:m, 5mu8:n, 5mu8:o, 5mu8:p, 5mu8:q, 5mu8:r, 5mu8:t, 5mu8:u, 5mu8:v, 6ooy:A, 6ooy:B, 6ooy:C, 6ooz:A, 6ooz:B, 6op0:A, 6op0:B, 7ta6:C, 7ta6:D, 7ta6:F, 7ta6:A, 7ta6:G, 4twt:A, 4twt:B, 4twt:D, 5uui:A, 6x81:A, 6x81:C, 6x81:B, 6x81:D, 6x81:E, 6x81:F, 6x82:A, 6x82:B, 6x82:C, 6x82:D, 6x82:E, 6x82:F, 6x83:A, 6x83:B, 6x83:C, 6x83:E, 6x83:F, 6x85:B, 6x85:C, 6x86:A, 6x86:B, 6x86:C, 6x86:D, 6x86:E, 6x86:F
30 7ta6:E 136 20 0.0976 0.0588 0.4000 7.9 6ooz:C, 6op0:C, 7ta6:B, 7ta6:H, 6x83:D
31 3ucp:A 800 70 0.2683 0.0275 0.3143 9.3 3ufh:A, 3ufk:A
32 6bcq:B 983 33 0.1585 0.0132 0.3939 9.9 6bco:B, 6bco:D, 6bco:A, 6bco:C, 6bcq:D, 6bcq:A, 6bcq:C

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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