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BioLiP
>protein
EAVVISGRKLAQQIKQEVRQEVEEWVASGNKRPHLSVILVGENPASHSYVLNKTRAAAVVGINSETIMKPASISEEELLN
LINKLNNDDNVDGLLVQLPLPEHIDERRICNAVSPDKDVDGFHVINVGRMCLDQYSMLPATPWGVWEIIKRTGIPTLGKN
VVVAGRSKNVGMPIAMLLHTDGAHERPGGDATVTISHRYTPKEQLKKHTILADIVISAAGIPNLITADMIKEGAAVIDVG
INRVHKPKLVGDVDFEGVRQKAGYITPVPGGVGPMTVAMLMKNTIIAAKKVL

The query sequence (length=292) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6s4f:B 298 297 1.0000 0.9799 0.9832 0.0 7ehj:A, 7ehj:B, 7ehm:A, 7ehm:B, 7ehn:A, 7ehn:B, 7ehv:A, 7ehv:B, 6jib:A, 6jib:B, 6jid:A, 6jid:B, 6kg2:A, 6kg2:B, 6s4a:A, 6s4a:B, 6s4e:A, 6s4f:A, 5tc4:A
2 7qei:A 291 292 0.7226 0.7251 0.7226 3.69e-161
3 5o22:C 284 287 0.4760 0.4894 0.4843 4.52e-86 5o22:A, 5o22:B, 5o22:D
4 6deb:B 284 290 0.4658 0.4789 0.4690 6.32e-80 3p2o:A, 3p2o:B
5 6v6y:A 277 287 0.4452 0.4693 0.4530 1.30e-69
6 4cjx:A 297 300 0.4212 0.4141 0.4100 1.51e-66 4cjx:B
7 4b4u:B 286 291 0.4075 0.4161 0.4089 1.83e-61 4b4u:A, 4b4v:A, 4b4v:B, 4b4w:A, 4b4w:B
8 1a4i:B 295 302 0.4075 0.4034 0.3940 4.89e-61 1a4i:A, 1dia:A, 1dia:B, 1dib:A, 1dib:B, 1dig:A, 1dig:B, 6ecp:A, 6ecp:B, 6ecq:A, 6ecq:B, 6ecr:A, 6ecr:B
9 3ngl:A 275 279 0.3014 0.3200 0.3154 3.58e-37 3ngl:C
10 1ee9:A 317 323 0.2705 0.2492 0.2446 8.20e-17
11 8hyh:A 366 35 0.0548 0.0437 0.4571 0.46
12 6yw5:AA 372 70 0.0582 0.0457 0.2429 0.89 6ywe:AA, 6ywx:AA, 6ywy:AA
13 5ket:A 328 47 0.0548 0.0488 0.3404 2.6 5ket:B
14 8gu0:B 450 71 0.0719 0.0467 0.2958 3.2 8gu0:A
15 7q4a:B 346 42 0.0479 0.0405 0.3333 3.8 7q4a:A
16 6fec:I 263 32 0.0445 0.0494 0.4062 5.1 7a01:j3, 7a09:q, 5a2q:E, 5aj0:BE, 9bdl:AS04, 9bdn:AS04, 9bdp:AS04, 8bhf:F3, 9bkd:C, 9bln:C, 8btk:Ad, 7cpu:SE, 7cpv:SE, 4d5l:E, 4d61:E, 6d90:FF, 6d9j:FF, 9f1b:Ad, 9f1c:Ad, 9f1d:Ad, 5flx:E, 6g18:E, 6g4s:E, 6g4w:E, 6g51:E, 6g53:E, 6g5h:E, 6g5i:E, 8g5y:SE, 8g5z:SE, 8g60:SE, 8g61:SE, 8g6j:SE, 8glp:SE, 6gz3:BE, 6gz4:BE, 6gz5:BE, 6hcf:F1, 6hcj:F2, 6hcm:F1, 6hcq:F2, 8ifd:2q, 8ife:2q, 6ip5:2q, 6ip6:2q, 6ip8:2q, 3j7p:SE, 3j7r:SE, 3jag:EE, 3jah:EE, 3jai:EE, 3jaj:SE, 3jan:SE, 8jdj:1, 8jdk:1, 8jdl:1, 8jdm:1, 7jqb:M, 7jqc:M, 5k0y:I, 8k2c:SE, 7k5i:E, 4kzx:E, 4kzy:E, 4kzz:E, 5lks:SE, 7ls1:r2, 7ls2:r2, 5lzs:EE, 5lzt:EE, 5lzu:EE, 5lzv:EE, 5lzw:EE, 5lzx:EE, 5lzy:EE, 5lzz:EE, 7mdz:EE, 7mq8:L4, 7mq9:L4, 7mqa:L4, 6mtb:EE, 6mtc:EE, 6mtd:EE, 6mte:EE, 7nwg:F2, 7nwh:EE, 7nwi:EE, 7o7y:Ad, 7o7z:Ad, 7o80:Ad, 7o81:Ad, 5oa3:E, 6ole:SE, 6olf:SE, 6olg:BE, 6oli:SE, 6olz:BE, 6om0:SE, 6om7:SE, 7oya:E2, 7oyb:E2, 7oyc:E2, 7oyd:EE, 8oz0:Y, 8p03:G, 8p09:G, 8p2k:Ad, 6p4g:F, 6p4h:F, 6p5i:F, 6p5j:F, 6p5k:F, 6p5n:F, 8pj1:C, 8pj2:C, 8pj3:C, 8pj4:C, 8pj5:C, 8pj6:C, 8ppk:E, 8ppl:AE, 8q7z:Ad, 8q87:Ad, 7qgg:SE, 8qoi:SE, 7qp6:C, 7qp7:C, 7qvp:RE, 7qvp:SE, 6qzp:SE, 7r4x:E, 6r5q:x, 6r6g:x, 6r6p:x, 6r7q:x, 8scb:EE, 6sgc:F1, 7syg:F, 7syh:F, 7syi:F, 7syj:F, 7syk:F, 7syl:F, 7sym:F, 7syn:F, 7syo:F, 7syp:F, 7syq:F, 7syr:F, 7sys:F, 7syt:F, 7syu:F, 7syv:F, 7syw:F, 7syx:F, 5t2c:Ar, 8t4s:E, 7toq:AS04, 7tor:AS04, 7tql:E, 7ucj:EE, 7uck:EE, 4ug0:SE, 4ujc:CE, 4ujd:CE, 4uje:BE, 4v6x:AE, 5vyc:E1, 5vyc:E2, 5vyc:E3, 5vyc:E4, 5vyc:E5, 5vyc:E6, 6w2s:F, 6w2t:F, 7wts:E, 7wtt:E, 7wtu:E, 7wtv:E, 7wtw:E, 7wtx:E, 7wtz:E, 7wu0:E, 6xa1:SE, 7xnx:SE, 7xny:SE, 8xsx:SE, 8xsy:SE, 8xsz:SE, 8xxl:SE, 8xxm:SE, 8xxn:SE, 6y0g:SE, 8y0w:SE, 8y0x:SE, 6y2l:SE, 6y57:SE, 6yal:G, 6yam:G, 6yan:G, 6ybw:C, 8yoo:SE, 8yop:SE, 6z6l:SE, 6z6m:SE, 6z6n:SE, 7zjw:SP, 7zjx:SP, 6zlw:E, 6zm7:SE, 6zme:SE, 6zmi:SE, 6zmo:SE, 6zmt:E, 6zmw:C, 6zn5:E, 6zoj:E, 6zok:E, 6zon:q, 6zp4:q, 6zuo:E, 6zv6:E, 6zvh:E, 6zvj:q, 6zvk:j3, 6zxd:E, 6zxe:E, 6zxf:E, 6zxg:E, 6zxh:E
17 3rf6:B 352 39 0.0445 0.0369 0.3333 5.1 3kc2:A, 3rf6:A
18 4l79:A 734 44 0.0479 0.0191 0.3182 6.4 6c1d:P, 6c1g:P
19 4tlm:C 750 32 0.0342 0.0133 0.3125 7.4 4tll:C
20 3dwf:B 275 27 0.0479 0.0509 0.5185 7.9 3dwf:A, 3dwf:C, 3dwf:D, 3g49:A, 3g49:B, 3g49:C, 3g49:D, 3lz6:A, 3lz6:B, 3lz6:C, 3lz6:D, 1xse:A, 1xse:B
21 2aos:A 361 23 0.0342 0.0277 0.4348 8.1 2fdm:A, 4mav:A, 4ml4:A, 4nsb:A, 2olh:A, 4q7n:A, 5z05:A, 5z3s:A, 5z4w:A, 1zbc:A, 1zbk:A, 1zbv:A, 1zbw:A, 1zl1:A
22 1xhl:A 274 76 0.0753 0.0803 0.2895 8.9 1xhl:B
23 4lj3:A 256 29 0.0479 0.0547 0.4828 9.4 4lj3:B, 4lyk:A, 4lyk:B, 4lyk:C, 4lyk:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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