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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
EAIGYGYQVKNAKVDNSTGKSLTALLQLIRNSPVYGPDIQFLSFTASFEEDDTLRIRITDANNRRWEIPNEVLPRPPPPP
PTTTVLSHPHSDLVFTLFHTTPFGFTIYRKSTHDVLFDATPIPSNPTTFLIYKDQYLQLSSSLPAQQAHLYGLGEHTKPT
FQLAHNQILTLWNADIASFNRDLNLYGSHPFYMDVRSSPMVGSTHGVFLLNSNGMDVEYTGDRITYKVIGGIIDLYIFAG
RTPEMVLDQYTKLIGRPAPMPYWAFGFHQCRWGYRDVNEIETVVDKYAEARIPLEVMWTDIDYMDAFKDFTLDPVHFPLD
KMQQFVTKLHRNGQRYVPILDPGINTNKSYGTFIRGMQSNVFIKRDGNPYLGSVWPGPVYYPDFLDPAARSFWVDEIKRF
RDILPIDGIWIDMNEASNFITSAPTPGSTLDNPPYKINNSGGRVPINSKTIPATAMHYGNVTEYNAHNLYGFLESQATRE
ALVRTSNERPFLLSRSTFAGSGKYTAHWTGDNAARWDDLQYSIPTMLNFGLFGMPMIGADICGFAESTTEELCRRWIQLG
AFYPFSRDHSARDTTHQELYLWESVAASARTVLGLRYQLLPYYYTLMYDANLRGIPIARPLFFTFPDDVATYGISSQFLI
GRGIMVSPVLQPGAVSVNAYFPRGNWFSLFNYTSSVSVSAGTYVSLSAPPDHINVHIHEGNIVAMQGEAMTTQAARSTPF
HLLVVMSDHVASTGELFLDNGIEMDIGGPGGKWTLVRFFAESGINNLTISSEVVNRGYAMSQRWVMDKITILGLKRRVRI
KGFVVSVISDLRQLVGQAFKLELEFE

The query sequence (length=826) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3wem:A 830 830 0.9988 0.9940 0.9940 0.0 3w37:A, 3wel:A, 3wen:A, 3weo:A
2 5kzw:A 850 769 0.3789 0.3682 0.4070 0.0 8cb1:A, 8cb6:A, 5kzx:A, 5nn4:A, 5nn5:A, 5nn6:A, 5nn8:A, 7p2z:AaA, 7p32:AAA
3 3l4u:A 864 852 0.3765 0.3600 0.3650 4.06e-173 3ctt:A, 3l4t:A, 3l4v:A, 3l4w:A, 3l4x:A, 3l4y:A, 3l4z:A, 2qmj:A
4 3lpp:B 869 814 0.3656 0.3475 0.3710 3.68e-158 3lpp:D
5 3top:A 890 787 0.3462 0.3213 0.3634 3.04e-157 3top:B
6 5ief:A 858 682 0.2639 0.2541 0.3196 1.99e-92 5h9o:A, 5h9o:C, 5hjo:A, 5hjo:C, 5hjr:A, 5hjr:C, 5ied:A, 5iee:A, 5ieg:A, 7jty:A, 7jty:C, 7k9n:A, 7k9n:C, 7k9o:A, 7k9o:C, 7k9q:A, 7k9q:C, 7k9t:A, 7k9t:C, 7kad:A, 7kad:C, 7kb6:A, 7kb6:C, 7kb8:A, 7kb8:C, 7kbj:A, 7kbj:C, 7kbr:A, 7kbr:C, 7kry:A, 7kry:C
7 5dky:A 928 641 0.2433 0.2166 0.3136 4.32e-84 5dkz:A, 5dl0:A
8 7xoi:A 465 402 0.1852 0.3290 0.3806 8.03e-84 7xoi:C, 7xoi:E, 7xoi:G, 7xoi:I, 7xoi:K, 7xoi:M, 7xoi:O
9 6c9x:A 666 620 0.2240 0.2778 0.2984 1.10e-80 6c9x:B, 6c9z:A, 6c9z:B, 6ca1:A, 6ca1:B, 6ca3:A, 6ca3:B, 3mkk:B, 3mkk:A, 3pha:A, 3pha:B, 3pha:C, 3pha:D, 3poc:B, 3poc:A
10 7xoi:B 436 359 0.1671 0.3165 0.3844 6.33e-63 7xoi:D, 7xoi:F, 7xoi:H, 7xoi:J, 7xoi:L, 7xoi:N, 7xoi:P
11 6jr7:A 812 574 0.1731 0.1761 0.2491 3.44e-51 6jr7:B, 6jr7:C, 6jr7:D, 6jr8:A, 6jr8:B, 6jr8:C, 6jr8:D
12 2f2h:A 773 532 0.1695 0.1811 0.2632 4.41e-42 2f2h:B, 2f2h:C, 2f2h:D, 2f2h:E, 2f2h:F, 1xsk:A, 1xsk:B, 1xsk:C, 1xsk:E
13 7knc:A 919 669 0.2058 0.1850 0.2541 1.32e-38
14 4ba0:A 781 582 0.1780 0.1882 0.2526 4.31e-37 4b9y:A, 4b9z:A, 5i23:A, 5i24:A, 5npb:A, 5npc:A, 5npd:A, 5npe:A, 7p4c:AAA, 7p4d:AAA, 8rw3:C, 8rw3:A, 8rw3:B
15 5jov:A 949 561 0.1755 0.1528 0.2585 5.69e-36
16 5zn7:A 680 586 0.1731 0.2103 0.2440 1.44e-35 5zn7:C, 5zn7:D, 5zn7:F, 5zn7:H
17 2xvk:A 944 681 0.1985 0.1737 0.2408 3.37e-35 2xvl:A
18 5x7o:A 1247 470 0.1441 0.0954 0.2532 5.35e-28 5x7o:B, 5x7p:B, 5x7p:A, 5x7q:A, 5x7q:B, 5x7r:A, 5x7r:B, 5x7s:A, 5x7s:B
19 5i0g:B 730 524 0.1550 0.1753 0.2443 1.05e-25 5f7s:A, 5f7s:B, 5i0e:B, 5i0f:B
20 6dru:A 718 509 0.1477 0.1699 0.2397 3.09e-22 6dru:B
21 5hxm:A 1060 610 0.1646 0.1283 0.2230 9.55e-22 5f7u:A, 5hpo:A, 5i0d:A, 5i0d:B, 4kmq:A, 4kwu:A
22 8r56:D 673 235 0.0811 0.0996 0.2851 8.45e-21 8r56:A, 8r56:B, 8r56:C
23 5x3j:A 718 495 0.1344 0.1546 0.2242 5.64e-19 5x3j:B, 5x3k:A, 5x3k:B
24 6pnr:A 667 373 0.1126 0.1394 0.2493 6.29e-19 6pnr:C
25 5aed:A 674 242 0.0860 0.1053 0.2934 9.58e-19 5aed:B, 5aee:A, 5aee:B, 5aeg:A, 5aeg:B, 5oht:A, 5oht:B
26 7wj9:A 733 214 0.0775 0.0873 0.2991 5.35e-18 7wj9:B, 7wj9:C, 7wj9:D, 7wj9:F, 7wj9:E, 7wjb:A, 7wjc:A, 7wjd:A, 7wje:A, 7wjf:A
27 7wj9:A 733 105 0.0375 0.0423 0.2952 0.005 7wj9:B, 7wj9:C, 7wj9:D, 7wj9:F, 7wj9:E, 7wjb:A, 7wjc:A, 7wjd:A, 7wje:A, 7wjf:A
28 7qqg:B 623 389 0.1174 0.1557 0.2494 2.14e-17 7qqg:A, 7qqg:C, 7qqh:A, 7qqh:B, 7qqh:C, 7qqh:D
29 4amw:A 1025 690 0.1901 0.1532 0.2275 3.16e-17 4amw:B, 4amw:C, 4amw:D, 4amx:A, 4amx:B, 4amx:C, 4amx:D, 2x2i:A, 2x2i:B, 2x2i:C, 2x2i:D, 2x2j:A, 2x2j:B, 2x2j:C, 2x2j:D
30 7qqg:D 496 388 0.1174 0.1956 0.2500 7.40e-16
31 7ofx:B 665 244 0.0835 0.1038 0.2828 4.71e-15 7ofx:A, 7ofx:C, 7ofx:D, 5ohs:A, 5ohs:B, 5ohs:C, 5ohs:D, 5ohs:E, 5ohs:F, 5ohs:G, 5ohs:H, 5ohy:A, 5ohy:B, 5ohy:C, 5ohy:D
32 6m77:A 907 165 0.0508 0.0463 0.2545 9.38e-14 7f7q:A, 7f7r:A
33 4xpq:A 670 555 0.1441 0.1776 0.2144 1.68e-13 4xpp:A, 4xps:A
34 8j51:A 510 176 0.0545 0.0882 0.2557 2.28e-08 8j51:B, 8j52:A, 8j52:B
35 3sng:A 267 25 0.0133 0.0412 0.4400 1.4 4dj4:A, 4dj4:B, 4jdg:A
36 5xy3:Q 185 70 0.0303 0.1351 0.3571 2.4
37 3wgc:B 333 57 0.0218 0.0541 0.3158 3.9 3wgb:A, 3wgb:B, 3wgb:C, 3wgb:D, 3wgc:A, 3wgc:C, 3wgc:D
38 3t3o:A 553 96 0.0278 0.0416 0.2396 4.8 3bk1:A, 3bk2:A, 3t3n:A
39 4cxv:A 258 25 0.0121 0.0388 0.4000 5.9 4cwm:A, 4cwm:B, 4cxo:A, 4cxp:A, 4cxv:B, 3w52:A
40 8gul:A 464 96 0.0315 0.0560 0.2708 6.0
41 4xch:A 149 97 0.0291 0.1611 0.2474 6.2 4xch:B, 4xch:C, 4xch:D
42 1cgm:E 160 74 0.0266 0.1375 0.2973 8.4
43 8rwz:B 160 100 0.0327 0.1688 0.2700 8.9 4ajy:V, 4awj:C, 4awj:F, 4awj:I, 4awj:L, 4b95:C, 4b95:F, 4b95:I, 4b95:L, 4b9k:C, 4b9k:F, 4b9k:I, 4b9k:L, 8bb2:L, 8bb3:L, 8bb4:P, 8bb5:C, 8bdi:L, 8bdi:F, 8bdi:I, 8bdi:C, 8bdj:C, 8bdj:F, 8bdj:I, 8bdj:L, 8bdl:C, 8bdl:F, 8bdl:I, 8bdl:L, 8bdm:I, 8bdm:F, 8bdm:C, 8bdm:L, 8bdn:C, 8bdn:F, 8bdn:I, 8bdn:L, 8bdo:C, 8bdo:F, 8bds:C, 8bdt:D, 8bdt:H, 8bdx:D, 8bdx:H, 8beb:C, 9bju:L, 9bju:I, 9bju:F, 9bju:C, 4bks:C, 4bks:F, 4bks:I, 4bks:L, 4bkt:C, 4bkt:F, 4bkt:I, 4bkt:L, 9bol:C, 9bol:F, 6bvb:V, 8c13:L, 7cjb:A, 7cjb:E, 7cjb:I, 7cjb:M, 8cqe:C, 8cqe:F, 8cqe:I, 8cqe:L, 8cqk:C, 8cqk:F, 8cqk:I, 8cqk:L, 8cql:C, 8cql:F, 8cql:I, 8cql:L, 8ei3:C, 9eqj:C, 9eqj:F, 9eqm:C, 8ewv:C, 8ewv:G, 8ewv:K, 8ewv:O, 8ewv:S, 8ewv:W, 6fmi:C, 6fmi:F, 6fmj:C, 6fmj:F, 6fmj:I, 6fmj:L, 6fmk:C, 6fmk:F, 6fmk:I, 6fmk:L, 8fy0:A, 8fy1:A, 8fy2:A, 8g1p:C, 8g1p:F, 8g1q:C, 6gfx:C, 6gfy:C, 6gfy:F, 6gfy:I, 6gfy:L, 6gfz:C, 6gfz:F, 6gfz:I, 6gfz:L, 6gmq:I, 6gmq:L, 6gmr:V, 6hax:B, 6hax:F, 6hay:B, 6hay:F, 6hr2:B, 6hr2:F, 6i7q:V, 6i7r:V, 7jto:L, 7jtp:L, 7khh:C, 5lli:C, 5lli:F, 5lli:I, 5lli:L, 1lm8:V, 1lqb:C, 5nvv:C, 5nvv:F, 5nvv:I, 5nvv:L, 5nvw:C, 5nvw:F, 5nvw:I, 5nvw:L, 5nvx:C, 5nvx:F, 5nvx:I, 5nvx:L, 5nvy:C, 5nvy:F, 5nvy:I, 5nvy:L, 5nvz:C, 5nvz:F, 5nvz:I, 5nvz:L, 5nw0:C, 5nw0:F, 5nw0:I, 5nw0:L, 5nw1:C, 5nw1:F, 5nw1:I, 5nw1:L, 5nw2:C, 5nw2:F, 5nw2:I, 5nw2:L, 8p0f:A, 8p0f:D, 8pc2:B, 8pc2:A, 7pi4:AAA, 7q2j:C, 8qjr:C, 8qjr:F, 8qjs:C, 8qjs:F, 8qjs:I, 8qjs:L, 8qu8:A, 8qvu:B, 8qvu:F, 8qw6:F, 8qw6:B, 8qw7:B, 8qw7:F, 8r5h:H, 8rx0:B, 7s4e:B, 7s4e:F, 6sis:D, 6sis:H, 5t35:D, 5t35:H, 8vl9:A, 8vlb:A, 4w9c:C, 4w9c:F, 4w9c:I, 4w9c:L, 4w9d:C, 4w9d:F, 4w9d:I, 4w9d:L, 4w9e:C, 4w9e:F, 4w9e:I, 4w9e:L, 4w9f:C, 4w9f:F, 4w9f:I, 4w9f:L, 4w9g:C, 4w9g:F, 4w9g:I, 4w9g:L, 4w9h:C, 4w9h:F, 4w9h:I, 4w9h:L, 4w9i:C, 4w9i:F, 4w9i:I, 4w9i:L, 4w9j:C, 4w9j:F, 4w9j:I, 4w9j:L, 4w9k:C, 4w9k:F, 4w9k:I, 4w9k:L, 4w9l:C, 4w9l:F, 4w9l:I, 4w9l:L, 8wdk:V, 7z6l:B, 7z76:C, 7z77:C, 6zhc:AAA, 7znt:C, 7znt:F, 3zrc:C, 3zrc:F, 3zrc:I, 3zrc:L, 3ztc:C, 3ztc:F, 3ztc:I, 3ztc:L, 3ztd:C, 3ztd:F, 3ztd:I, 3ztd:L, 3zun:C, 3zun:F, 3zun:I, 3zun:L
44 5myj:AQ 82 42 0.0133 0.1341 0.2619 8.9

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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