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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
DYTLTRIDPRYPLQKQEIVTDPLNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQ
ADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLL
QESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPDEI

The query sequence (length=208) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7z7s:B 213 213 1.0000 0.9765 0.9765 3.65e-155 7nyr:B, 7nyu:B, 7nyv:B, 7p61:B, 7p62:B, 7p63:B, 7p64:B, 7p7c:B, 7p7j:B, 7p7k:B, 7p7l:B, 7p7m:B, 7z7r:B, 7z7t:B, 7z7v:B, 7z80:B, 7z83:B, 7z84:B
2 7p69:B 169 183 0.7885 0.9704 0.8962 3.36e-118 7nz1:B, 7p7e:B, 7zc5:B, 7zci:B
3 7awt:B 141 169 0.6779 1.0000 0.8343 1.49e-96
4 6i0d:6 166 141 0.3990 0.5000 0.5887 3.32e-62 4hea:6, 4hea:G, 6i0d:G, 6i1p:6, 6i1p:G, 3i9v:6, 3i9v:F, 3ias:6, 3ias:F, 3ias:O, 3ias:X, 3m9s:6, 3m9s:F, 6q8o:6, 6q8o:G, 6q8w:6, 6q8w:G, 6q8x:6, 6q8x:G, 6y11:6, 6y11:G, 6ziy:6, 6zjl:6, 6zjn:6, 6zjy:6
5 8e9g:B 183 143 0.3558 0.4044 0.5175 1.14e-56 8e9h:B, 8e9i:B
6 8e73:S7 158 156 0.3798 0.5000 0.5064 1.08e-55 7a23:E, 7a24:E, 7aqr:B, 7ar7:B, 7ar8:B, 7arb:B, 8bee:B, 8bpx:B, 8bq5:B, 8bq6:B, 6x89:S7
7 8q0j:B 158 148 0.3702 0.4873 0.5203 3.48e-55 7ak5:B, 7ak6:B, 7b93:B, 8c2s:B, 8ca3:B, 8ca5:B, 7dgq:D, 7dgr:D, 7dgs:D, 7dgz:D, 7dh0:D, 7dkf:D2, 6g2j:B, 6g72:B, 5gpn:a, 5gup:I, 8iao:B, 8iap:B, 8ib4:B, 8ib5:B, 8ib9:B, 8iba:B, 8ibd:B, 8ibe:B, 8ic2:B, 8ic3:B, 5lc5:B, 5ldw:B, 5ldx:B, 5lnk:6, 5o31:B, 8olt:B, 8om1:B, 7psa:B, 8pw5:6, 8pw6:6, 8pw7:6, 8q0a:B, 8q0f:B, 8q0m:B, 8q0o:B, 8q0q:B, 8q1p:B, 8q1u:B, 8q1y:B, 8q25:B, 8q45:B, 8q46:B, 8q47:B, 8q48:B, 8q49:B, 8q4a:B, 6q9d:S7, 6qa9:S7, 6qbx:S7, 6qc2:S7, 6qc3:S7, 6qc4:S7, 6qc5:S7, 6qc6:S7, 6qc7:S7, 6qc8:S7, 6qc9:S7, 6qca:S7, 6qcf:S7, 7qsd:B, 7qsk:B, 7qsl:B, 7qsm:B, 7qsn:B, 7qso:B, 7r41:B, 7r42:B, 7r43:B, 7r44:B, 7r45:B, 7r46:B, 7r47:B, 7r48:B, 7r4c:B, 7r4d:B, 7r4f:B, 7r4g:B, 8rgp:6, 8rgq:6, 8rgr:6, 8rgt:6, 8ud1:1B, 8ueo:1B, 8uep:1B, 8ueq:1B, 8uer:1B, 8ues:1B, 8uet:1B, 8ueu:1B, 8uev:1B, 8uew:1B, 8uex:1B, 8uey:1B, 8uez:1B, 8ugh:1B, 8ugi:1B, 8ugj:1B, 8ugn:1B, 8ugn:5B, 8ugp:1B, 8ugr:1B, 8ugr:5B, 7v2c:C, 7v2d:C, 7v2e:C, 7v2f:C, 7v2h:C, 7v2k:C, 7v2r:C, 7v30:C, 7v31:C, 7v32:C, 7v33:C, 7v3m:C, 7vb7:C, 7vbn:C, 7vbz:C, 7vwj:C, 7vxp:C, 7vxu:C, 7vy8:C, 7vya:C, 7vyf:C, 7vyh:C, 7vyn:C, 7vz1:C, 7vzv:C, 7vzw:C, 7w00:C, 7w0h:C, 7w0r:C, 7w0y:C, 7w1o:C, 7w1p:C, 7w1t:C, 7w1u:C, 7w1v:C, 7w1z:C, 7w20:C, 7w2k:C, 7w2l:C, 7w2r:C, 7w2u:C, 7w2y:C, 7w31:C, 7w32:C, 7w35:C, 7w4c:C, 7w4d:C, 7w4e:C, 7w4f:C, 7w4g:C, 7w4j:C, 7w4k:C, 7w4l:C, 7w4m:C, 7w4n:C, 7w4q:C, 5xtb:C, 5xtd:C, 5xth:C, 5xti:C, 5xti:BC, 7zd6:6, 7zdh:6, 7zdj:6, 7zdm:6, 7zdp:6, 7zeb:6, 6zk9:6, 6zkc:6, 6zkd:6, 6zke:6, 6zkf:6, 6zkg:6, 6zkh:6, 6zki:6, 6zkj:6, 6zkk:6, 6zkl:6, 6zkm:6, 6zkn:6, 6zko:6, 6zkp:6, 6zkq:6, 6zkr:6, 6zks:6, 6zkt:6, 6zku:6, 6zkv:6, 6zr2:B, 6ztq:B
8 8b9z:B 182 148 0.3798 0.4341 0.5338 6.08e-55 8ba0:B, 8esw:S7, 8esz:S7
9 7o6y:K 177 164 0.3750 0.4407 0.4756 1.46e-51 6gcs:K, 7o71:K, 6rfq:K, 6rfr:K, 6rfs:K, 4wz7:K, 6y79:K, 6yj4:B
10 7tgh:S7 162 139 0.3558 0.4568 0.5324 2.39e-51 8b6f:AT, 8bqs:AT, 8gym:s7, 8gym:S7, 8gzu:s7, 8gzu:S7
11 6nbq:K 212 147 0.3654 0.3585 0.5170 3.11e-51 6hum:K, 6khi:K, 6khj:K, 6l7o:K, 6l7p:K, 6nbx:K, 6nby:K, 6tjv:K
12 7zm7:K 182 163 0.3750 0.4286 0.4785 3.00e-50 6h8k:K, 7zmb:K, 7zmg:K
13 7q5y:F 135 132 0.3221 0.4963 0.5076 4.84e-49 7q5y:L, 7q5y:R, 7q5y:X
14 7wfg:K 167 146 0.3558 0.4431 0.5068 8.35e-49 7wg5:K
15 7arc:B 154 151 0.3606 0.4870 0.4967 1.02e-48 7ard:B
16 2fug:6 144 141 0.3413 0.4931 0.5035 3.01e-48 2fug:F, 2fug:O, 2fug:X, 3iam:6, 3iam:F, 2ybb:6
17 8iuf:S7 201 136 0.3221 0.3333 0.4926 2.99e-47 8j9h:S7, 8j9i:S7, 8j9j:S7
18 8qby:B 148 140 0.3413 0.4797 0.5071 3.31e-47
19 6u8y:J 177 133 0.2692 0.3164 0.4211 4.06e-28 6u8y:j
20 7z0s:G 250 157 0.2788 0.2320 0.3694 2.05e-24 7z0t:G
21 6cfw:J 143 133 0.2404 0.3497 0.3759 2.52e-24
22 6qgr:G 253 112 0.1538 0.1265 0.2857 1.21e-04 6qgt:G, 6qii:G
23 5odc:E 298 142 0.1731 0.1208 0.2535 2.03e-04 5odc:K, 5odh:E, 5odh:K, 5odi:E, 5odi:K, 5odq:E, 5odq:K, 5odr:E, 5odr:K
24 5xf9:C 178 88 0.1250 0.1461 0.2955 6.72e-04 5xf9:G, 5xfa:C, 5xfa:G
25 4omf:G 231 120 0.1346 0.1212 0.2333 0.011 4ci0:B, 3zfs:B
26 5jsh:A 283 66 0.1106 0.0813 0.3485 0.21 5jsk:A, 5jsu:A, 5jsy:A, 5jt1:A, 6rtp:A, 6ru9:A, 6ruc:A, 2wpn:A, 6z7r:A, 6z7r:C, 6z8j:A, 6z8j:C, 6z8m:A, 6z8o:A, 6z8o:C, 6z9g:A, 6z9g:C, 6z9g:E, 6z9g:G, 6z9o:A, 6za1:A, 3ze6:A, 3ze7:A, 3ze8:A, 3ze9:A, 3zea:A
27 4urh:C 264 67 0.0962 0.0758 0.2985 0.65 3cur:A, 3cur:B, 3cur:C, 3cus:A, 3cus:B, 3cus:C, 1frf:S, 3h3x:A, 3h3x:B, 3h3x:C, 4ucq:A, 4ucq:B, 4ucq:C, 4ucw:A, 4ucw:B, 4ucw:C, 4ucx:A, 4ucx:B, 4ucx:C, 4ud2:A, 4ud2:B, 4ud2:C, 4ud6:A, 4ud6:B, 4ud6:C, 4ue2:A, 4ue2:B, 4ue2:C, 4ue6:A, 4ue6:B, 4ue6:C, 4ueq:A, 4ueq:B, 4ueq:C, 4ueq:D, 4ueq:E, 4ueq:F, 4uew:A, 4uew:B, 4uew:C, 4upe:A, 4upe:B, 4upe:C, 4upv:A, 4upv:B, 4uql:A, 4uql:B, 4uqp:A, 4uqp:B, 4urh:A, 4urh:B, 1yqw:A, 1yqw:B, 1yqw:C, 1yrq:A, 1yrq:B, 1yrq:C, 1yrq:D, 1yrq:F, 1yrq:G
28 8r7y:C 312 61 0.0817 0.0545 0.2787 1.3 7bhy:A, 7bhy:B, 7bhy:C, 4oqp:A, 8r7y:D, 8r7y:A, 8r7y:B
29 5aa5:A 345 63 0.0817 0.0493 0.2698 1.8 5aa5:B, 5aa5:D, 5aa5:F, 5aa5:H, 5aa5:M
30 4c3o:B 263 70 0.0913 0.0722 0.2714 2.1 4c3o:D, 4c3o:F
31 1pyt:C 248 44 0.0577 0.0484 0.2727 2.2
32 1frv:A 262 88 0.1106 0.0878 0.2614 2.8 1frv:C, 2frv:S, 2frv:A, 2frv:C, 2frv:E, 2frv:G, 2frv:I, 1yq9:A, 1yq9:B
33 7t2r:E 179 16 0.0481 0.0559 0.6250 3.1 7t2r:J, 7t30:E, 7t30:J
34 4hv4:A 465 33 0.0673 0.0301 0.4242 7.6 4hv4:B
35 3bkb:A 373 73 0.0913 0.0509 0.2603 9.3 3cbl:A, 4e93:A, 6jmf:A, 7t1k:A, 7t1l:A, 7t1l:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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