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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
DYQAEKEKCKTFLQEFYKKNFKYGVQLANIAHREQVALCIDLDDLAEEDPELVDAICENTRRYTNLFADAVQELLPQYKE
REVVHKDALDVYIEHRLMMEQRYPPELMRRFELYFKAPSSSKARVVRDVKADSIGKLVTVRGIVTRVTEVKPMMVVATYT
CDQCGAETYQPIQSPTFMPLIMCPSRECQTNRSGGRLYLQTRGSKFIKFQELKIQEHSDQVPVGNIPRCMSVYVRGENTR
LAQPGDHVGITGVFLPMLRLLSETYLESHRLVKMN

The query sequence (length=275) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8q6o:F 275 275 1.0000 1.0000 1.0000 0.0 8q6o:7
2 8b9d:7 576 283 0.8218 0.3924 0.7986 1.96e-166
3 7plo:7 607 291 0.8255 0.3740 0.7801 8.95e-166 7pfo:7
4 7w1y:F 643 303 0.8327 0.3561 0.7558 1.42e-165 7w1y:7
5 6xtx:7 598 282 0.7564 0.3478 0.7376 1.09e-149 6xty:7
6 6rax:7 632 295 0.6509 0.2832 0.6068 3.95e-123 6raw:7
7 6raz:7 601 287 0.6255 0.2862 0.5993 2.01e-114 6ray:7
8 8ouw:7 632 294 0.4691 0.2041 0.4388 6.70e-81
9 8kg9:7 636 304 0.4545 0.1965 0.4112 5.64e-66 7pmk:7, 7pmn:7, 6skl:7, 8xgc:7
10 5v8f:7 725 311 0.4655 0.1766 0.4116 4.21e-64 8b9a:7, 8b9b:7, 8b9c:7, 3jc6:7, 3jc7:7, 8kg6:7, 8kg8:7, 8p5e:7, 8p62:7, 8p63:7, 7pt6:7, 7pt6:G, 7pt7:7, 7pt7:G, 7qhs:7, 6rqc:7, 6sko:7, 8w7m:7, 7z13:7, 7z13:f
11 7v3u:7 699 338 0.4618 0.1817 0.3757 2.76e-60 5bk4:F, 5bk4:7, 6eyc:7, 3ja8:7, 7p30:7, 7p30:F, 7p5z:7, 7p5z:F, 7v3u:G, 7v3v:7, 7v3v:G, 7w8g:7, 7w8g:G
12 5v8f:6 692 158 0.2036 0.0809 0.3544 3.92e-26 8b9a:6, 8b9b:6, 8b9c:6, 6eyc:6, 3ja8:6, 8kg6:6, 8kg8:6, 8kg9:6, 7p30:6, 7p30:E, 7p5z:6, 7p5z:E, 8p5e:6, 8p62:6, 8p63:6, 7pmk:6, 7pmn:6, 6ptn:m, 6ptn:6, 6pto:l, 6pto:6, 7pt6:6, 7pt6:F, 7pt7:6, 7pt7:F, 6rqc:6, 6skl:6, 6sko:6, 6u0m:6, 5u8s:6, 8w7m:6, 8xgc:6
13 7v3u:6 646 157 0.2036 0.0867 0.3567 5.07e-26 7qhs:6, 7v3u:F, 7v3v:6, 7v3v:F, 7w8g:6, 7w8g:F, 7z13:6, 7z13:e
14 5u8t:6 661 154 0.2000 0.0832 0.3571 1.53e-25 6wgi:6
15 8ouw:6 707 148 0.1782 0.0693 0.3311 2.22e-19
16 4pof:A 255 222 0.2327 0.2510 0.2883 2.11e-18 5iy0:A, 5iy0:B, 5iy0:C, 5iy0:D, 5iy0:E, 5iy0:F, 4pof:B, 4pof:C, 4pof:D, 4pof:E, 4pof:F, 4pog:A, 4pog:E, 4pog:F, 4pog:K, 4pog:L, 4pog:G, 4pog:H, 4pog:I, 4pog:J, 4pog:B, 4pog:C, 4pog:D, 4ywl:A, 4ywl:B, 4ywl:C, 4ywl:D, 4ywl:E, 4ywl:F, 4ywl:G, 4ywl:H, 4ywl:I, 4ywl:J, 4ywm:A, 4ywm:B, 4ywm:C, 4ywm:D, 4ywm:E, 4ywm:F, 4ywm:G, 4ywm:H, 4ywm:I, 4ywm:J
17 8x7u:D 654 224 0.2291 0.0963 0.2812 3.93e-18 8x7u:E, 8x7u:C, 8x7u:B, 8x7u:F, 8x7u:A
18 6rax:6 628 245 0.2364 0.1035 0.2653 3.05e-15 6ray:6
19 6raw:6 601 245 0.2364 0.1082 0.2653 3.26e-15 6raz:6
20 6xtx:6 679 130 0.1491 0.0604 0.3154 1.01e-14 8b9d:6, 7pfo:6, 7plo:6, 6xty:6
21 7w1y:6 716 130 0.1491 0.0573 0.3154 1.15e-14 7w1y:E
22 8q6o:E 249 144 0.1491 0.1647 0.2847 1.27e-14 8q6o:6
23 8q6o:C 258 249 0.2218 0.2364 0.2450 1.07e-12 8q6o:4
24 6rax:4 626 157 0.1491 0.0655 0.2611 1.28e-12 6raw:4, 6ray:4, 6raz:4
25 8ouw:4 619 195 0.1818 0.0808 0.2564 2.41e-12
26 6rax:5 620 262 0.2255 0.1000 0.2366 2.67e-12 6ray:5, 6raz:5
27 4r7y:A 591 131 0.1455 0.0677 0.3053 3.33e-12 4r7y:B, 4r7z:A, 4r7z:B, 4r7z:C, 4r7z:D, 4r7z:E, 4r7z:F, 4r7z:G, 4r7z:H, 4r7z:I, 4r7z:P, 4r7z:J, 4r7z:K, 4r7z:L, 4r7z:M, 4r7z:N, 4r7z:O
28 4fdg:B 592 131 0.1455 0.0676 0.3053 4.43e-12 8eaf:A, 8eaf:B, 8eaf:C, 8eaf:D, 8eaf:E, 8eaf:F, 8eag:B, 8eag:C, 8eag:D, 8eag:E, 8eag:F, 8eag:A, 8eah:A, 8eah:B, 8eah:C, 8eah:D, 8eah:E, 8eah:F, 8eai:B, 8eai:C, 8eai:D, 8eai:E, 8eai:F, 8eai:A, 8eaj:A, 8eaj:B, 8eaj:C, 8eaj:D, 8eaj:E, 8eaj:F, 8eak:B, 8eak:C, 8eak:D, 8eak:E, 8eak:A, 8eak:F, 8eal:A, 8eal:B, 8eal:C, 8eal:D, 8eal:E, 8eal:F, 8eam:B, 8eam:C, 8eam:D, 8eam:E, 8eam:A, 8eam:F, 4fdg:A, 4fdg:C, 4fdg:D, 4fdg:E, 6mii:A, 6mii:B, 6mii:C, 6mii:D, 6mii:E, 6mii:F, 2vl6:A, 2vl6:B, 2vl6:C, 6wnz:B, 6wnz:A
29 8b9d:4 677 232 0.2109 0.0857 0.2500 1.17e-11 7pfo:4, 7plo:4
30 8s91:A 602 133 0.1455 0.0664 0.3008 3.07e-11 7dp3:A, 8s91:B, 8s91:C, 8s94:A, 8s94:C, 8s94:B
31 7wi7:A 565 133 0.1455 0.0708 0.3008 3.18e-11
32 8p5e:3 649 219 0.2073 0.0878 0.2603 3.21e-11 8kg6:3, 8kg8:3, 8kg9:3, 8p62:3, 8p63:3, 7pt6:3, 7pt6:C, 7pt7:3, 7qhs:3, 7v3u:3, 7v3u:C, 7v3v:3, 7v3v:C, 7w8g:3, 7w8g:C, 7z13:3, 7z13:b
33 8w7m:3 619 219 0.2073 0.0921 0.2603 3.66e-11 8b9a:3, 8b9b:3, 8b9c:3, 7pmk:3, 6skl:3, 8xgc:3
34 7w1y:4 653 153 0.1382 0.0582 0.2484 9.44e-11 7w1y:C, 6xtx:4, 6xty:4
35 7pt7:C 633 146 0.1491 0.0648 0.2808 1.05e-10
36 1ltl:E 242 210 0.2145 0.2438 0.2810 1.22e-10 1ltl:A, 1ltl:B, 1ltl:C, 1ltl:D, 1ltl:F
37 4me3:A 246 135 0.1345 0.1504 0.2741 1.57e-09
38 6skl:4 679 129 0.1418 0.0574 0.3023 1.97e-09 8kg9:4, 8xgc:4
39 5v8f:4 741 129 0.1418 0.0526 0.3023 2.04e-09 5bk4:C, 5bk4:4, 6eyc:4, 6f0l:C, 3ja8:4, 7p30:4, 7p30:C, 7p5z:C, 7p5z:4, 7pt6:4, 7pt6:D, 7pt7:4, 7pt7:D, 6rqc:4, 7v3u:4, 7v3u:D, 7v3v:4, 7v3v:D, 7w8g:4, 7w8g:D
40 8kg8:4 697 129 0.1418 0.0560 0.3023 2.19e-09 8b9a:4, 8b9b:4, 8b9c:4, 8kg6:4, 8p5e:4, 8p62:4, 8p63:4, 7pmk:4, 7pmn:4, 7qhs:4, 6sko:4, 8w7m:4, 7z13:4, 7z13:c
41 7w1y:5 710 268 0.2145 0.0831 0.2201 2.24e-09 7plo:5, 7w1y:D
42 6rax:2 605 130 0.1382 0.0628 0.2923 2.25e-09 6raw:2, 6ray:2
43 6hv9:3 558 133 0.1345 0.0663 0.2782 3.50e-09
44 8q6o:D 256 265 0.2145 0.2305 0.2226 5.21e-09 8q6o:5
45 8ouw:2 701 258 0.2036 0.0799 0.2171 6.92e-09
46 8xgc:2 778 161 0.1455 0.0514 0.2484 7.47e-09 8kg6:2, 8kg8:2, 8kg9:2, 8p5e:2, 8p62:2, 8p63:2, 7pmk:2, 7pmn:2, 6ptn:i, 6ptn:2, 6pto:h, 6pto:2, 7qhs:2, 6skl:2, 6u0m:2, 7z13:2, 7z13:a
47 7pt6:2 629 161 0.1455 0.0636 0.2484 8.95e-09 5bk4:2, 5bk4:A, 6eyc:2, 6f0l:A, 6f0l:2, 3ja8:2, 7p30:2, 7p30:A, 7p5z:2, 7p5z:A, 7pt6:B, 7pt7:2, 7pt7:B, 6rqc:2, 6sko:2, 5u8s:2, 7v3u:2, 7v3u:B, 7v3v:2, 7v3v:B, 5v8f:2, 8w7m:2, 7w8g:2, 7w8g:B
48 6wgi:3 637 156 0.1527 0.0659 0.2692 9.93e-09
49 6raw:5 576 256 0.2109 0.1007 0.2266 2.73e-08
50 7pfo:5 605 266 0.2000 0.0909 0.2068 6.17e-08 8b9d:5
51 6xtx:5 577 262 0.2000 0.0953 0.2099 6.41e-08 6xty:5
52 7w1y:2 706 131 0.1200 0.0467 0.2519 1.19e-07 7pfo:2, 7plo:2, 8q6o:A, 8q6o:2, 8q6p:2, 7w1y:A, 6xtx:2, 6xty:2
53 7wi7:B 566 135 0.1345 0.0654 0.2741 1.38e-07
54 8p5e:5 695 248 0.2036 0.0806 0.2258 4.85e-07 6eyc:5, 6f0l:D, 6f0l:5, 3ja8:5, 8kg6:5, 8kg8:5, 8kg9:5, 7p30:5, 7p30:D, 7p5z:5, 7p5z:D, 8p62:5, 8p63:5, 7pmk:5, 6ptn:l, 6ptn:5, 6pto:k, 6pto:5, 7pt6:5, 7pt6:E, 7pt7:5, 7pt7:E, 7qhs:5, 6rqc:5, 6skl:5, 6u0m:5, 5u8s:5, 5u8t:5, 7v3u:5, 7v3u:E, 7v3v:5, 7v3v:E, 7w8g:5, 7w8g:E, 8xgc:5, 7z13:5, 7z13:d
55 8w7m:5 529 129 0.1273 0.0662 0.2713 5.50e-07
56 8b9a:5 533 129 0.1273 0.0657 0.2713 6.49e-07 8b9b:5, 8b9c:5, 6sko:5
57 7pmn:5 660 129 0.1273 0.0530 0.2713 7.85e-07
58 8ouw:5 541 159 0.1455 0.0739 0.2516 3.93e-06
59 6rax:3 625 121 0.1091 0.0480 0.2479 5.86e-06
60 6ray:3 600 121 0.1091 0.0500 0.2479 5.99e-06 6raw:3, 6raz:3
61 8ouw:3 619 234 0.1636 0.0727 0.1923 1.89e-05
62 5u8t:2 583 157 0.1273 0.0600 0.2229 6.56e-05
63 6t5e:A 439 71 0.0873 0.0547 0.3380 7.53e-05
64 5v8f:3 654 146 0.1309 0.0550 0.2466 7.96e-05 5bk4:B, 5bk4:3, 6eyc:3, 6f0l:3, 6f0l:B, 3ja8:3, 7p30:3, 7p30:B, 7p5z:3, 7p5z:B, 6ptn:j, 6ptn:3, 6pto:i, 6pto:3, 6rqc:3, 6sko:3, 6u0m:3, 5u8s:3, 5u8t:3
65 6hv9:2 549 124 0.1200 0.0601 0.2661 1.45e-04
66 7w1y:B 651 122 0.1200 0.0507 0.2705 7.24e-04 7w1y:3
67 5bk4:D 661 268 0.2182 0.0908 0.2239 7.40e-04 5bk4:5
68 6xtx:3 608 122 0.1200 0.0543 0.2705 8.35e-04
69 7plo:3 628 122 0.1200 0.0525 0.2705 0.001 7pfo:3
70 8s91:D 621 134 0.1273 0.0564 0.2612 0.009 7dpd:A, 7dpd:B, 8s91:E, 8s91:F, 8s94:D, 8s94:F, 8s94:E
71 6raz:2 559 129 0.0982 0.0483 0.2093 0.009
72 6hv9:5 628 125 0.1200 0.0525 0.2640 0.013
73 8b9a:2 568 65 0.0655 0.0317 0.2769 0.028 8b9b:2, 8b9c:2
74 8b9d:3 569 120 0.1127 0.0545 0.2583 0.035
75 8b9d:2 576 51 0.0509 0.0243 0.2745 0.082
76 7bj9:B 230 58 0.0655 0.0783 0.3103 0.65 7bj9:A, 5ew0:A, 5ew0:B, 8hxn:A, 3q6v:A, 3q6v:B, 3sd9:A, 3sd9:B
77 4n4j:A 497 71 0.0727 0.0402 0.2817 1.2 4n4k:A, 4n4l:A, 4n4m:A, 4rwm:A
78 3l43:B 246 38 0.0509 0.0569 0.3684 1.2 3l43:A, 3l43:C, 3l43:D
79 3fai:A 227 66 0.0618 0.0749 0.2576 3.4 3f9o:A, 2gkl:A, 3iof:A, 3iog:A, 2qds:A, 1x8g:A, 1x8h:A, 1x8i:A
80 4v58:G 2060 83 0.0836 0.0112 0.2771 4.0 4v58:H, 4v58:I, 4v58:J, 4v58:K, 4v58:L, 4v59:G, 4v59:H, 4v59:I, 4v59:J, 4v59:K, 4v59:L
81 6sup:A 2128 70 0.0727 0.0094 0.2857 5.6
82 5h59:A 311 37 0.0582 0.0514 0.4324 5.6 5h5j:A, 5h5j:C, 1jb9:A, 3lo8:A, 3lvb:A, 5vw2:A, 5vw3:A, 5vw4:A, 5vw5:A, 5vw6:A, 5vw7:A, 5vw8:A, 5vw9:A, 5vwa:A, 5vwb:A
83 2rak:A 382 76 0.0764 0.0550 0.2763 8.3
84 6q8y:z 874 54 0.0582 0.0183 0.2963 8.8

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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