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BioLiP
>protein
DVQVTEDAVRRYLTRKPMTTKDLLKKFQTKKTGLSSEQTVNVLAQILKRLNPERKMINDKMHFSLKE

The query sequence (length=67) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1j2x:A 70 67 1.0000 0.9571 1.0000 3.27e-44 2k7l:A, 1onv:A
2 6r6u:A 458 36 0.2090 0.0306 0.3889 0.043 6r6u:B
3 8tpt:B 571 35 0.2090 0.0245 0.4000 0.54
4 3zyv:B 1262 33 0.2090 0.0111 0.4242 1.8 3zyv:A, 3zyv:C, 3zyv:D
5 4v6w:AG 231 17 0.1343 0.0390 0.5294 2.2 6xu6:AG, 6xu7:AG, 6xu8:AG
6 8c41:A 720 32 0.1940 0.0181 0.4062 3.2 8c41:B
7 1z16:A 344 35 0.1642 0.0320 0.3143 3.4 1z17:A, 1z18:A
8 3tz6:A 342 52 0.1940 0.0380 0.2500 4.0 3vos:A
9 5b2o:A 1455 34 0.1940 0.0089 0.3824 4.3 5b2p:A, 5b2q:A
10 5xut:A 1217 58 0.2388 0.0131 0.2759 5.3 5id6:A, 6nm9:B, 6nm9:D, 6nma:B, 6nmc:A, 6nmd:A, 6nme:A, 6omv:B, 5xus:A, 5xuu:A, 5xuz:A, 5xuz:E
11 6kl9:A 1180 58 0.2388 0.0136 0.2759 5.9
12 6klb:A 1118 58 0.2388 0.0143 0.2759 6.2 6klb:D
13 2nto:A 201 34 0.1791 0.0597 0.3529 6.5 2pvq:A
14 4dno:A 297 54 0.2239 0.0505 0.2778 6.9 4dnf:A, 4dnf:B, 4dnf:C, 4dnf:D, 4dno:B, 4dno:C, 4dno:D, 4ehb:A, 4ehb:B, 4ehb:C, 4ehb:D, 4eus:B, 4eus:D, 5hk9:A, 5hk9:B, 5hk9:D, 5hka:A, 5hka:B, 5hka:C, 5hka:D, 5hkb:A, 5hkb:B, 5hkb:C, 5hkb:D, 5jyc:A, 5jyc:B, 5jyc:C, 5jyc:D, 5tnd:C, 5tnd:D, 5tnd:A, 5tnd:B, 5tne:A, 5tne:C, 5tnf:A, 5tnf:B, 5tnf:C, 5tnf:D, 5tng:A, 5tng:B, 5tng:C, 5tng:D, 5tnh:C, 5tnh:D, 5tnh:A, 5tnh:B, 5tni:A, 5tni:B, 5tni:C, 5tni:D, 5tnj:A, 5tnj:B, 5tnj:C, 5tnj:D, 5tnk:A, 5tnk:B, 5tnk:C, 5tnk:D, 5tnl:A, 5tnl:B, 5tnl:C, 5tnl:D, 5tnm:A, 5tnm:B, 5tnm:C, 5tnm:D, 5tnn:A, 5tnn:B, 5tnn:C, 5tnn:D, 5tnp:A, 5tnp:B, 5tnp:C, 5tnp:D, 5tnq:C, 5tnq:D, 5tnq:A, 5tnq:B, 5tnr:C, 5tnr:D, 5tnr:A, 5tnr:B, 5tns:D, 4yx9:A, 4yx9:B, 4yx9:C, 4yx9:D
15 8e9h:D 407 23 0.1493 0.0246 0.4348 7.7 8e9g:D
16 7f1m:A 394 30 0.1493 0.0254 0.3333 9.7 7f1m:B, 5f5o:A, 5f5o:C, 5f5o:E, 5xsq:A, 5xsq:C, 5xsq:E

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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