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BioLiP
>protein
DVAGLTPCKESKGFAKREKQEIKKLESRLKLYAPDSAPALALNATIEKTKRRFAFYGNEGLLCGTDGLPHLIVDGDQAHL
GEFVYPGLVFLYIAGWIGWVGRAYLIDVRTSKKPTEKEIIIDVPLALRIMSKGLTWPVAAIGELRSGKLVEKSANITVS

The query sequence (length=159) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8htu:F 161 159 0.9623 0.9503 0.9623 4.42e-112 7ksq:F, 7kux:F, 6l35:F, 7xqp:F
2 5l8r:F 154 153 0.7170 0.7403 0.7451 2.36e-83 7dkz:F, 4rku:F, 4y28:F, 6yac:F, 6yez:F, 6zoo:F, 6zxs:F
3 7wfe:BF 154 153 0.6918 0.7143 0.7190 1.02e-78 8j6z:F, 8j7a:F, 8j7b:F, 7wfd:AF, 7wg5:AF, 7wg5:BF, 8wgh:F
4 6ly5:f 162 151 0.6730 0.6605 0.7086 4.55e-78 3lw5:F, 2o01:F, 2wsc:F, 2wse:F, 2wsf:F, 4xk8:F, 4xk8:f
5 5zji:F 158 156 0.6918 0.6962 0.7051 6.94e-76
6 8bcv:F 158 156 0.6730 0.6772 0.6859 1.59e-74 7ew6:F, 7ewk:F, 7f9o:F, 7f9o:j
7 7yca:F 165 157 0.6415 0.6182 0.6497 3.20e-69
8 8wm6:F 161 159 0.6164 0.6087 0.6164 8.46e-68 8wmj:F, 8wmv:F, 8wmw:F
9 7y7b:F 160 158 0.6038 0.6000 0.6076 3.70e-66 7y8a:F
10 7bgi:F 165 163 0.6226 0.6000 0.6074 5.45e-65 7blx:F, 7d0j:F, 7dz7:F, 7dz8:F, 8h2u:F, 6ijj:F, 6ijo:F, 6jo5:F, 6jo6:F, 7r3k:F, 7wyi:F, 7wzn:F, 7zq9:F, 7zqc:F, 7zqd:F, 7zqd:F2
11 7dr0:F 161 159 0.5849 0.5776 0.5849 1.19e-64 7dr1:F, 7dr2:aF, 7dr2:bF, 7dr2:cF, 7dr2:dF
12 8cmo:F 165 163 0.6164 0.5939 0.6012 1.66e-64
13 7y5e:FN 158 158 0.5849 0.5886 0.5886 4.57e-64 7y5e:F2, 7y7a:F7, 7y7a:Fo
14 6igz:F 163 163 0.5723 0.5583 0.5583 1.85e-63
15 6qph:F 163 163 0.5849 0.5706 0.5706 5.01e-61 6rhz:F, 6sl5:F, 6yxr:F
16 6l4u:F 161 159 0.5597 0.5528 0.5597 1.22e-59
17 7a4p:F 165 163 0.5786 0.5576 0.5644 1.77e-59 6zzx:F, 6zzy:F
18 7blz:F 155 155 0.5220 0.5355 0.5355 5.44e-57 6fos:F, 5zgb:F, 5zgh:F
19 8wey:F 158 155 0.4969 0.5000 0.5097 7.50e-55
20 4fe1:F 141 159 0.5031 0.5674 0.5031 2.12e-47 7fix:F1, 7fix:F2, 7fix:F3, 1jb0:F, 6k33:bF, 6k33:aF, 6k33:cF, 7m75:F, 7m76:F, 7m78:F, 3pcq:F, 6pfy:Q, 6pfy:F, 6pfy:d, 6pgk:Q, 6pgk:F, 6pgk:d, 6tra:F, 6trc:F, 6trc:f, 6trc:6, 6trd:F, 6trd:f, 6trd:6, 5zf0:F1, 5zf0:F2, 5zf0:F3, 5zf0:F4, 5zf0:F6, 5zf0:F5
21 6kif:F 136 159 0.4780 0.5588 0.4780 4.02e-44 6kif:R, 6kif:j, 6kig:F, 6kig:R, 6kig:j
22 7qco:F 141 157 0.4591 0.5177 0.4650 1.69e-41 7qco:O, 7qco:o, 7qco:f
23 6hqb:F 143 159 0.4403 0.4895 0.4403 1.98e-41 8am5:f, 8asl:f, 8asp:f, 4kt0:F, 6nwa:F, 6nwa:f, 6nwa:Q, 5oy0:F, 5oy0:f, 5oy0:6, 7umh:F, 7umh:Q, 7umh:f, 6uzv:F, 6uzv:6, 6uzv:f
24 6vpv:F 141 159 0.4465 0.5035 0.4465 1.80e-39 6vpv:f, 6vpv:6
25 6jeo:bF 141 157 0.4088 0.4610 0.4140 7.25e-35 6jeo:aF, 6jeo:cF, 6jeo:dF, 6k61:F, 6k61:f, 6tcl:F1, 6tcl:F2, 6tcl:F, 6tcl:FF, 7y3f:F
26 8jze:f 184 147 0.4025 0.3478 0.4354 2.85e-32 8jzf:f
27 8jjr:f 169 150 0.3962 0.3728 0.4200 5.15e-32
28 8jw0:f 185 156 0.4088 0.3514 0.4167 2.58e-29
29 4l6v:F 125 79 0.2830 0.3600 0.5696 6.83e-29 8am5:j, 8asl:j, 8asp:j, 6hqb:J, 4kt0:J, 4l6v:f, 4l6v:6, 6nwa:J, 6nwa:j, 6nwa:S, 5oy0:J, 5oy0:j, 5oy0:7, 7umh:J, 7umh:S, 7umh:j, 6uzv:J, 6uzv:j, 6uzv:7
30 7f4v:aF 151 153 0.3899 0.4106 0.4052 8.92e-26 7f4v:bF, 7f4v:cF
31 7lx0:Q 135 155 0.3648 0.4296 0.3742 9.27e-25 7lx0:f, 7lx0:F, 6pnj:Q, 6pnj:f, 6pnj:F
32 7s3d:F 124 100 0.2767 0.3548 0.4400 1.33e-21 7s3d:Q, 7s3d:f
33 7dwq:F 103 123 0.2893 0.4466 0.3740 1.81e-15
34 6a2d:A 519 130 0.2013 0.0617 0.2462 1.6 6a2c:A, 6a2c:B, 6a2d:B
35 6i34:B 954 50 0.1069 0.0178 0.3400 4.3 6i33:A, 6i34:A, 6i34:C, 6i34:D, 6i35:A, 6i35:B, 6i35:C, 6i35:D
36 6i33:B 925 50 0.1069 0.0184 0.3400 4.9
37 8wey:5 183 61 0.1195 0.1038 0.3115 7.0 7blz:2, 6fos:2, 6fos:3, 8wey:2, 5zgb:2, 5zgb:5, 5zgh:2
38 4im7:A 483 38 0.0818 0.0269 0.3421 8.3

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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