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BioLiP
>protein
DVAGLIPCSQSDAFERRLKNTTQRLENRLKKYEPGSAPAEALQKQIDKTQQRFDKYRNSGLLCGADGLPHLITDGRWSHA
GEFTIPGLLFLYIAGFIGWSGRSYLQAVAASDNSTEKEIIIDIPVALQSVSKGFVWPLAALQEFSSGKLTARDEEITISP
R

The query sequence (length=161) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7dr0:F 161 161 1.0000 1.0000 1.0000 7.09e-119 7dr1:F, 7dr2:aF, 7dr2:bF, 7dr2:cF, 7dr2:dF
2 8wm6:F 161 161 0.6398 0.6398 0.6398 4.04e-78 8wmj:F, 8wmv:F, 8wmw:F
3 7y7b:F 160 160 0.6211 0.6250 0.6250 5.16e-75 7y8a:F
4 7y5e:FN 158 158 0.6025 0.6139 0.6139 4.23e-70 7y5e:F2, 7y7a:F7, 7y7a:Fo
5 6l4u:F 161 161 0.5590 0.5590 0.5590 3.69e-68
6 8htu:F 161 161 0.5839 0.5839 0.5839 1.32e-66 7ksq:F, 7kux:F, 6l35:F, 7xqp:F
7 7blz:F 155 156 0.5652 0.5871 0.5833 2.65e-64 6fos:F, 5zgb:F, 5zgh:F
8 8wey:F 158 157 0.5466 0.5570 0.5605 8.04e-63
9 7yca:F 165 159 0.5590 0.5455 0.5660 9.58e-60
10 7wfe:BF 154 153 0.5217 0.5455 0.5490 1.76e-59 8j6z:F, 8j7a:F, 8j7b:F, 7wfd:AF, 7wg5:AF, 7wg5:BF, 8wgh:F
11 7a4p:F 165 165 0.5528 0.5394 0.5394 2.30e-59 6zzx:F, 6zzy:F
12 5l8r:F 154 153 0.5280 0.5519 0.5556 4.42e-59 7dkz:F, 4rku:F, 4y28:F, 6yac:F, 6yez:F, 6zoo:F, 6zxs:F
13 5zji:F 158 156 0.5155 0.5253 0.5321 1.77e-58
14 8bcv:F 158 156 0.5155 0.5253 0.5321 3.30e-58 7ew6:F, 7ewk:F, 7f9o:F, 7f9o:j
15 8cmo:F 165 165 0.5404 0.5273 0.5273 1.20e-57
16 6igz:F 163 163 0.5155 0.5092 0.5092 1.01e-56
17 7bgi:F 165 165 0.5217 0.5091 0.5091 1.32e-55 7blx:F, 7d0j:F, 7dz7:F, 7dz8:F, 8h2u:F, 6ijj:F, 6ijo:F, 6jo5:F, 6jo6:F, 7r3k:F, 7wyi:F, 7wzn:F, 7zq9:F, 7zqc:F, 7zqd:F, 7zqd:F2
18 6qph:F 163 163 0.4969 0.4908 0.4908 1.87e-53 6rhz:F, 6sl5:F, 6yxr:F
19 6ly5:f 162 150 0.4783 0.4753 0.5133 6.29e-53 3lw5:F, 2o01:F, 2wsc:F, 2wse:F, 2wsf:F, 4xk8:F, 4xk8:f
20 4fe1:F 141 164 0.5280 0.6028 0.5183 6.41e-53 7fix:F1, 7fix:F2, 7fix:F3, 1jb0:F, 6k33:bF, 6k33:aF, 6k33:cF, 7m75:F, 7m76:F, 7m78:F, 3pcq:F, 6pfy:Q, 6pfy:F, 6pfy:d, 6pgk:Q, 6pgk:F, 6pgk:d, 6tra:F, 6trc:F, 6trc:f, 6trc:6, 6trd:F, 6trd:f, 6trd:6, 5zf0:F1, 5zf0:F2, 5zf0:F3, 5zf0:F4, 5zf0:F6, 5zf0:F5
21 6kif:F 136 161 0.5093 0.6029 0.5093 2.30e-51 6kif:R, 6kif:j, 6kig:F, 6kig:R, 6kig:j
22 7qco:F 141 162 0.4845 0.5532 0.4815 5.59e-48 7qco:O, 7qco:o, 7qco:f
23 6vpv:F 141 164 0.4596 0.5248 0.4512 1.45e-45 6vpv:f, 6vpv:6
24 6jeo:bF 141 159 0.4472 0.5106 0.4528 1.82e-43 6jeo:aF, 6jeo:cF, 6jeo:dF, 6k61:F, 6k61:f, 6tcl:F1, 6tcl:F2, 6tcl:F, 6tcl:FF, 7y3f:F
25 6hqb:F 143 161 0.4224 0.4755 0.4224 4.54e-43 8am5:f, 8asl:f, 8asp:f, 4kt0:F, 6nwa:F, 6nwa:f, 6nwa:Q, 5oy0:F, 5oy0:f, 5oy0:6, 7umh:F, 7umh:Q, 7umh:f, 6uzv:F, 6uzv:6, 6uzv:f
26 7lx0:Q 135 159 0.4037 0.4815 0.4088 1.31e-34 7lx0:f, 7lx0:F, 6pnj:Q, 6pnj:f, 6pnj:F
27 7f4v:aF 151 113 0.3292 0.3510 0.4690 3.45e-32 7f4v:bF, 7f4v:cF
28 8jw0:f 185 153 0.3602 0.3135 0.3791 3.34e-31
29 8jze:f 184 153 0.3602 0.3152 0.3791 3.36e-31 8jzf:f
30 8jjr:f 169 150 0.3354 0.3195 0.3600 5.35e-29
31 4l6v:F 125 84 0.2733 0.3520 0.5238 6.32e-28 8am5:j, 8asl:j, 8asp:j, 6hqb:J, 4kt0:J, 4l6v:f, 4l6v:6, 6nwa:J, 6nwa:j, 6nwa:S, 5oy0:J, 5oy0:j, 5oy0:7, 7umh:J, 7umh:S, 7umh:j, 6uzv:J, 6uzv:j, 6uzv:7
32 7s3d:F 124 154 0.3416 0.4435 0.3571 7.94e-27 7s3d:Q, 7s3d:f
33 7dwq:F 103 126 0.3168 0.4951 0.4048 3.89e-17
34 8b0r:A 496 62 0.1304 0.0423 0.3387 0.001
35 6a2d:A 519 77 0.1615 0.0501 0.3377 0.15 6a2c:A, 6a2c:B, 6a2d:B
36 7xk7:D 206 56 0.0994 0.0777 0.2857 4.8 8a1t:D, 8a1u:D, 8a1v:D, 8a1w:D, 8a1x:D, 8a1y:D, 8acw:D, 8acy:D, 8ad0:D, 8evu:D, 8ew3:D, 7xk3:D, 7xk4:D, 7xk5:D, 7xk6:D
37 6a1i:A 522 59 0.1118 0.0345 0.3051 5.2 6a1d:A, 6a1e:A, 6a3x:A, 7e9r:B, 7e9r:C, 6k16:A, 6o9p:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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