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BioLiP
>protein
DSRELIARYQILLAELAAIRADIAAERTGDPYVRKLARELKRLAQEAAEEVKRDPSSSDVNMALLLILLMIELAVRALEA
AERTGDPEVRELAAELVWLAVEAAEEVQRNPSSSDVWLALHLIMLAIWAAVAALEAAERTGDPEVRELARELVRLAVEAA
EEVQRNPSSKEVYMALLLILIAILEAVLSLLRAERSGDPEKREKARERVREAVERAEE

The query sequence (length=218) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7unj:A 218 218 1.0000 1.0000 1.0000 5.59e-144 7unj:B
2 6n4n:F 191 157 0.5963 0.6806 0.8280 5.67e-78 6n4n:C
3 6n4n:F 191 136 0.4633 0.5288 0.7426 1.81e-51 6n4n:C
4 6n4n:F 191 114 0.3853 0.4398 0.7368 1.37e-42 6n4n:C
5 6n4n:F 191 66 0.1927 0.2199 0.6364 3.07e-14 6n4n:C
6 8fit:A 229 206 0.3165 0.3013 0.3350 7.79e-07 8fit:C
7 8fit:A 229 68 0.1193 0.1135 0.3824 0.008 8fit:C
8 8fit:A 229 68 0.1101 0.1048 0.3529 0.011 8fit:C
9 7tcd:A 436 82 0.1422 0.0711 0.3780 1.19e-04 4wf0:A, 4wf0:B
10 7ue2:A 304 157 0.2294 0.1645 0.3185 0.016
11 7ue2:A 304 148 0.1835 0.1316 0.2703 0.34
12 5kyn:A 730 47 0.0963 0.0288 0.4468 0.19 3efo:A, 3eg9:A, 3egd:A, 3egx:A, 8hr0:A, 5kyn:B, 5kyu:A, 5kyw:A, 5kyx:A, 5kyy:A, 2nup:A, 2nut:A, 5vne:A, 5vnf:A, 5vng:A, 5vnh:A, 5vni:A, 5vnj:A, 5vnk:A, 5vnl:A, 5vnm:A, 5vnn:A, 5vno:A
13 7udj:H 192 136 0.1927 0.2188 0.3088 0.31
14 2y6o:A 263 69 0.0963 0.0798 0.3043 1.2 2xyu:A
15 3dak:D 284 141 0.1514 0.1162 0.2340 2.4 3dak:A, 3dak:B, 3dak:C, 2vwi:B, 2vwi:C, 2vwi:D
16 7udm:B 281 163 0.1972 0.1530 0.2638 2.9 7udl:A, 7udm:A
17 3ndb:B 420 82 0.1147 0.0595 0.3049 3.7 2v3c:C, 2v3c:D, 4xco:D
18 8gdl:A 355 37 0.0550 0.0338 0.3243 3.8 8gdl:B
19 4i5j:A 266 31 0.0550 0.0451 0.3871 4.3 4i5k:A, 4i5k:B
20 7zu8:A 336 30 0.0459 0.0298 0.3333 4.3 7zva:A, 7zvb:A, 7zvc:A
21 2w2l:A 346 36 0.0826 0.0520 0.5000 6.8 2w2l:B, 2w2l:C, 2w2l:D
22 3ozz:B 82 74 0.0780 0.2073 0.2297 8.9

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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