Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
DSMSRVWLTGDAVVDLIPDGQQHYLKCPGGAPANVAVAIARLSGRSAFFGRVGNDPFGRFMQQTLTDEQVDCQHLHFDPV
HRTSTVVVDLDEHGERSFTFMVKPSADQFLQLSDIPSFQKGEWLHVCSIALANQPSRSSTFAAIAQMKEVGGYVSFDPNL
REEVWSEPQELQATVMRAVGLADVVKFSEEELQFLTGTQSIEEGLQAIADFQIPLVVVTLGAKGALVATPNSQQIVSGKA
VKPIDTTGAGDAFVGGLLYRLSVAQDWHNQATILDAVKWANGCGALATTQKGAMTALPNQAALYAFLE

The query sequence (length=308) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5ygg:A 310 308 0.9935 0.9871 0.9935 0.0 5eyn:A, 5f0z:A, 5f11:A
2 1tz3:A 299 304 0.4091 0.4214 0.4145 8.69e-81 1tz6:A, 1tz6:B
3 3ih0:A 304 309 0.3214 0.3257 0.3204 3.14e-36 3gbu:A, 3gbu:B, 3gbu:C, 3gbu:D
4 3lki:B 322 302 0.3247 0.3106 0.3311 7.34e-35
5 1v1a:A 301 314 0.3214 0.3289 0.3153 1.70e-27 1v1a:B, 1v1b:A, 1v1b:D, 1v1b:B, 1v1b:C
6 3iq0:B 308 316 0.2792 0.2792 0.2722 1.30e-26 3iq0:A
7 7fca:D 282 261 0.2532 0.2766 0.2989 7.43e-23 7cf8:A, 7cf8:E, 7fca:A, 7fca:E
8 4wjm:A 312 263 0.2435 0.2404 0.2852 2.28e-21
9 8cqx:A 300 292 0.2922 0.3000 0.3082 3.87e-21 8cqx:B, 8cqx:C, 8cqx:D, 6znx:A, 6znx:B, 6znx:D
10 6znx:C 265 304 0.2955 0.3434 0.2993 3.49e-19
11 6a8a:A 327 295 0.2435 0.2294 0.2542 2.79e-18 6a8a:B, 6a8b:A, 6a8b:B, 6a8c:A, 6a8c:B, 5zwy:A, 5zwy:B
12 4xck:A 306 297 0.2532 0.2549 0.2626 1.05e-17 4xck:B, 4xck:C, 4xck:D, 4xda:A, 4xda:B, 4xda:C, 4xda:D
13 3in1:A 312 285 0.2305 0.2276 0.2491 1.35e-14 3in1:B
14 2dcn:A 308 298 0.2338 0.2338 0.2416 9.99e-14 2dcn:B, 2dcn:C, 2dcn:D, 2dcn:E, 2dcn:F, 2dcn:G, 2dcn:H, 2dcn:I, 2dcn:J, 2dcn:K, 2dcn:L
15 7ag6:A 302 286 0.2435 0.2483 0.2622 1.04e-13 7ag6:B, 7agh:C, 7agh:D, 7agh:A, 7agh:B, 7agk:A, 7agk:B, 7agk:C
16 4ebu:A 306 266 0.2110 0.2124 0.2444 6.34e-12 4eum:A, 4eum:B
17 5c41:A 317 298 0.2273 0.2208 0.2349 9.89e-12 5byf:A, 5byf:B, 5c3y:A, 5c3y:B, 5c3y:C, 5c3y:D, 5c3y:E, 5c3y:F, 5c3y:G, 5c3y:H, 5c3y:I, 5c3y:J, 5c3y:K, 5c3y:L, 5c3z:A, 5c3z:B, 5c40:A, 5c40:B, 5c41:B, 5c41:C, 5c41:D, 2fv7:A, 2fv7:B, 6wjz:A, 6wjz:B, 6wk0:A, 6wk0:B, 6wk0:C, 6wk0:D
18 2var:A 311 243 0.1786 0.1768 0.2263 9.99e-12 2var:B, 2var:C
19 1gqt:B 307 292 0.2435 0.2443 0.2568 4.51e-11 1gqt:A, 1gqt:C, 1gqt:D, 1rk2:A, 1rk2:B, 1rk2:C, 1rk2:D, 1rkd:A, 1rks:A
20 3ubo:A 338 245 0.2110 0.1923 0.2653 5.30e-11 3ubo:B
21 2c49:A 299 285 0.2240 0.2308 0.2421 1.45e-10 2c49:B
22 6ils:B 313 295 0.2532 0.2492 0.2644 1.86e-10 6ils:A, 6ilt:A, 6ilt:B
23 4k8p:A 332 262 0.2110 0.1958 0.2481 1.35e-08 4e3a:A, 4e3a:B, 4jks:A, 4jks:B, 4jku:A, 4jku:B, 4k8c:A, 4k8c:B, 4k8k:A, 4k8k:B, 4k8p:B, 4k8t:A, 4k8t:B, 4k93:A, 4k93:B, 4k9c:A, 4k9c:B, 4k9i:A, 4k9i:B, 4kad:A, 4kad:B, 4kah:A, 4kah:B, 4kal:A, 4kal:B, 4kan:A, 4kan:B, 4kbe:A, 4kbe:B, 4lbg:A, 4lbg:B, 4lbx:A, 4lbx:B, 4lc4:A, 4lc4:B, 4lca:A, 4lca:B
24 3b1n:B 320 137 0.1364 0.1313 0.3066 4.08e-08 3b1n:A, 3b1p:A, 3b1q:A, 3b1q:B, 3b1q:C, 3b1q:D, 3b1q:E, 3b1q:F, 3b1r:A, 3b1r:B, 3b1r:C, 3b1r:D, 3b1r:E, 3b1r:F
25 3n1c:A 309 312 0.2727 0.2718 0.2692 1.27e-07 3cqd:A, 3cqd:B, 3n1c:D, 3n1c:B, 3n1c:C, 3umo:A, 3umo:B, 3ump:A, 3ump:B, 3uqd:A, 3uqd:C, 3uqd:B, 3uqd:D, 3uqe:A, 3uqe:B
26 3ie7:A 309 111 0.1201 0.1197 0.3333 1.74e-07 3jul:A
27 2a9y:A 351 297 0.2500 0.2194 0.2593 2.32e-06 2a9z:A, 2aa0:A, 2ab8:A, 2abs:A, 1dgm:A, 1lii:A, 1lij:A, 1lik:A
28 6xk2:A 320 298 0.2403 0.2313 0.2483 5.98e-06 6xk2:B, 6xk2:C, 6xk2:D
29 2afb:A 329 268 0.2110 0.1976 0.2425 7.14e-05
30 6c9r:A 337 235 0.2143 0.1958 0.2809 1.60e-04 6c67:A, 6c67:B, 6c9n:A, 6c9n:B, 6c9p:A, 6c9p:B, 6c9q:A, 6c9r:B, 6c9s:A, 6c9s:B, 6c9v:A, 6c9v:B, 4o1g:A, 2pkk:A, 2pkm:A, 2pkn:A, 4pvv:A, 4ube:A
31 3kd6:A 300 130 0.1039 0.1067 0.2462 2.98e-04 3kd6:B
32 3ikh:A 286 268 0.2078 0.2238 0.2388 3.24e-04 3i3y:D, 3ikh:B, 3ikh:C, 3ikh:D
33 3loo:B 341 273 0.2240 0.2023 0.2527 0.001 3loo:A, 3loo:C
34 8ome:A 298 244 0.1753 0.1812 0.2213 0.002 2hw1:A, 8ome:D, 8ome:B, 8ome:C
35 3go6:A 287 80 0.0974 0.1045 0.3750 0.003 3go6:B, 3go7:A, 3go7:B
36 8ug1:B 305 244 0.1721 0.1738 0.2172 0.017 9fhd:A, 9fhd:B, 9fhe:A, 9fhe:B, 3nbv:A, 3nbv:B, 3nbw:A, 3nbw:B, 3nc2:A, 3nc2:B, 3nc9:A, 3nc9:B, 3nca:A, 8omf:A, 8omf:B, 8omj:A, 8omj:B, 8omk:A, 8omk:B, 3q92:A, 3q92:B, 3qa2:A, 3qa2:B, 3qai:A, 3qai:B, 3ro4:A, 8ug1:A, 8ug3:A, 8ug3:B, 6ul7:A, 6w0n:A, 6w0n:B, 6w0w:A, 6w0w:B, 6w0x:A, 6w0x:B, 6w0y:A, 6w0y:B, 6w0z:A, 6w0z:B, 5wbm:A, 5wbm:B, 5wbo:A, 5wbo:B, 5wbp:A, 5wbq:A, 5wbq:B, 5wbr:A, 5wbr:B, 5wbz:A, 5wbz:B
37 3ktn:A 340 191 0.1429 0.1294 0.2304 0.025
38 6wb7:A 296 49 0.0682 0.0709 0.4286 0.052 6wb7:B, 6wb7:C, 6wb7:D
39 2ajr:A 320 280 0.1948 0.1875 0.2143 0.16 2ajr:B
40 2i6a:A 343 50 0.0617 0.0554 0.3800 0.16 1bx4:A, 2i6a:B, 2i6a:C, 2i6a:D, 2i6b:A, 2i6b:B, 5kb5:A, 5kb6:A, 5kb6:B, 4o1l:A, 4o1l:B
41 7w93:A 307 279 0.1948 0.1954 0.2151 0.18 7vsk:A, 7vte:A, 7vte:B, 7vte:C, 7vte:D, 7vtf:A, 7vtf:B, 7vtf:C, 7vtf:D, 7vtg:A, 7vtg:B, 7vtg:C, 7vtg:D, 7vva:A, 7vva:B, 7vva:C, 7vva:D
42 3kzh:A 316 272 0.2078 0.2025 0.2353 0.28 3kzh:B
43 8omd:A 296 244 0.1753 0.1824 0.2213 0.33 8omd:C, 8omd:B, 8omd:D, 6p2d:A
44 4n09:A 345 55 0.0649 0.0580 0.3636 0.41 4n09:B, 4n09:C, 4n09:D, 3otx:A, 3otx:B, 2xtb:A
45 4y4m:F 262 113 0.1006 0.1183 0.2743 0.74 4y4m:A, 4y4m:B, 4y4m:C, 4y4m:D, 4y4m:E, 4y4m:G, 4y4m:H
46 4s1h:A 287 96 0.0812 0.0871 0.2604 0.74 4s1h:B, 4s1i:A, 4s1i:B
47 2f02:A 319 108 0.0974 0.0940 0.2778 1.6 2f02:B
48 1phn:B 172 106 0.0909 0.1628 0.2642 2.0 3brp:B, 3kvs:B
49 2jg1:A 318 91 0.0812 0.0786 0.2747 2.1 2jg1:B, 2jg1:C, 2jg1:D, 2jgv:B, 2jgv:D
50 4cej:A 1177 128 0.0714 0.0187 0.1719 3.0 4ceh:A, 4cei:A
51 8ets:V 443 71 0.0747 0.0519 0.3239 3.0 8ets:X, 8ets:T, 8etu:V, 8etu:X, 8etu:T, 8etw:V, 8etw:X, 8etw:T, 8eu9:V, 8eu9:X, 8eu9:T, 8euf:V, 8euf:X, 8euf:T, 6gej:T, 6gej:V, 6gej:X, 6gen:T, 6gen:V, 6gen:X
52 9ema:A 326 58 0.0617 0.0583 0.3276 3.8 7aho:A, 7aho:C, 2c9o:C, 9ema:B, 9ema:C, 9emc:A, 9emc:B, 9emc:C, 6fo1:A, 6fo1:B, 6fo1:C, 6k0r:A, 6k0r:B, 6k0r:C, 6k0r:G, 6k0r:H, 6k0r:I, 7p6x:A, 7p6x:B, 7p6x:C, 6qi8:C, 6qi9:C, 2xsz:A, 2xsz:B, 2xsz:C
53 2c9o:A 398 58 0.0617 0.0477 0.3276 4.1 2c9o:B
54 7ole:C 427 58 0.0617 0.0445 0.3276 4.7 7ole:E
55 7zi4:C 447 58 0.0617 0.0425 0.3276 5.2 9c57:E, 9c57:C, 9c57:A, 9c62:C, 9c62:E, 9c62:A, 6hts:A, 6hts:C, 6hts:E, 5oaf:A, 5oaf:C, 5oaf:E, 8x15:M, 8x15:O, 8x15:Q, 8x19:M, 8x19:O, 8x19:Q, 8x1c:M, 8x1c:O, 8x1c:Q, 8xvg:A, 8xvg:C, 8xvg:E, 8xvt:A, 8xvt:C, 8xvt:E, 7zi4:A, 7zi4:E
56 3uq6:A 345 50 0.0617 0.0551 0.3800 7.7 4dc3:A, 4dc3:B, 3uq6:B, 3uq9:A, 3uq9:B, 3vaq:A, 3vaq:B, 3vas:A, 3vas:B
57 5an1:A 219 74 0.0714 0.1005 0.2973 7.8 5an1:B, 5an1:C, 5an1:D, 5an1:E, 5an1:F, 5an1:G, 5an1:H, 7so8:A, 7so8:C, 7so8:E, 7so8:G, 7so8:H, 7so8:F, 7so8:B, 7so8:D
58 3cjq:B 121 58 0.0519 0.1322 0.2759 8.8 3cjq:E, 3cjq:H
59 4cic:A 138 60 0.0584 0.1304 0.3000 9.0 4cic:B
60 8tri:C 419 96 0.0747 0.0549 0.2396 9.4
61 8tri:B 454 96 0.0747 0.0507 0.2396 9.7 7suu:A, 7suu:B, 8tri:A
62 5vqe:A 559 35 0.0422 0.0233 0.3714 9.7

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218