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BioLiP
>protein
DSCMSFQCKRGHICKADQQGKPHCVCQDPVTCPPTKPLDQVCGTDNQTYASSCHLFATKCRLEGTKKGHQLQLDYFGACK
SIPTCTDFEVIQFPLRMRDWLKNILMQLYEANSEVKKIYLDEKRLLAGDHPIDLLLRDFKKNYHMYVYPVHWQFSELDQH
PMDRVLTHSELAPLRASLVPMEHCITRFFEECDPNKDKHITLKEWGHCFGIKEEDIDENLL

The query sequence (length=221) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7kbu:A 221 221 1.0000 1.0000 1.0000 1.20e-168 7kbu:B
2 1bmo:A 233 231 0.6199 0.5880 0.5931 1.96e-102 1bmo:B, 1nub:A, 1nub:B, 1sra:A, 2v53:A
3 2p6a:C 282 90 0.1222 0.0957 0.3000 7.77e-05 1lr7:A, 1lr8:A
4 2p6a:C 282 88 0.1267 0.0993 0.3182 0.001 1lr7:A, 1lr8:A
5 2p6a:C 282 82 0.1267 0.0993 0.3415 0.022 1lr7:A, 1lr8:A
6 4r1f:A 366 154 0.1584 0.0956 0.2273 1.6 1zxn:A
7 2jul:A 181 33 0.0543 0.0663 0.3636 2.5 2e6w:A
8 7d6v:B 239 32 0.0543 0.0502 0.3750 5.4 7d6x:B
9 3dd4:A 214 86 0.0995 0.1028 0.2558 6.0
10 2xrc:B 485 43 0.0679 0.0309 0.3488 7.1 5o32:D, 5o32:H, 2xrc:A, 2xrc:D
11 2xrc:C 454 43 0.0679 0.0330 0.3488 7.3
12 8f5o:B 1134 73 0.1086 0.0212 0.3288 7.8 8f5p:B
13 2scp:A 174 31 0.0498 0.0632 0.3548 8.3 2scp:B
14 5ey5:B 383 44 0.0633 0.0366 0.3182 9.5 5ey5:D
15 4v12:A 337 94 0.1086 0.0712 0.2553 9.7

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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