BioLiP

>protein
DQPRPAFSAIRRNPPMGGNVVIFDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQVLSQWEICLSIVSSSRGQVRRSLGFC
DTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKGHIYQGSEADSVFSGFLIFPSAKFQSVFTVTRQTHQPPAPNSLIRFN
AVLTNPQGDYDTSTGKFTCKVPGLYYFVYHASHTANLCVLLYRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWLAV
NDYYDMVGIQGSDSVFSGFLLFPDGSAKATQKIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYY
FTYHASSRGNLCVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATDKNSLLGMEGANSIFSGFLLFP
DM

The query sequence (length=402) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	5hkj:A	402	402	1.0000	1.0000	1.0000	0.0	5hzf:A, 2jg8:B, 2jg8:C, 2jg8:D, 2jg8:E, 2jg9:B, 2jg9:E, 1pk6:B, 2wnu:F, 2wnv:B, 2wnv:C, 2wnv:D, 2wnv:E
2	4dou:A	399	399	0.3234	0.3258	0.3258	1.61e-57
3	4dou:A	399	275	0.2438	0.2456	0.3564	1.62e-40
4	5kca:A	807	419	0.3060	0.1524	0.2936	7.36e-38	5kc8:A
5	6u66:B	142	134	0.1343	0.3803	0.4030	7.72e-21	1c3h:D, 1c3h:E, 1c3h:F, 6u66:A, 6u66:C
6	6u66:B	142	141	0.1169	0.3310	0.3333	1.07e-15	1c3h:D, 1c3h:E, 1c3h:F, 6u66:A, 6u66:C
7	6u66:B	142	115	0.0796	0.2254	0.2783	4.02e-11	1c3h:D, 1c3h:E, 1c3h:F, 6u66:A, 6u66:C
8	4qql:C	131	143	0.1294	0.3969	0.3636	3.03e-19	4qql:A, 4qql:B, 4qql:D, 4qql:F, 4qql:E, 4qql:G, 4qql:H, 4qql:I
9	4qql:C	131	138	0.1144	0.3511	0.3333	3.29e-14	4qql:A, 4qql:B, 4qql:D, 4qql:F, 4qql:E, 4qql:G, 4qql:H, 4qql:I
10	4qql:C	131	118	0.0920	0.2824	0.3136	1.25e-12	4qql:A, 4qql:B, 4qql:D, 4qql:F, 4qql:E, 4qql:G, 4qql:H, 4qql:I
11	4d7y:A	131	138	0.1169	0.3588	0.3406	2.07e-18
12	4d7y:A	131	138	0.1269	0.3893	0.3696	1.21e-16
13	4d7y:A	131	118	0.0920	0.2824	0.3136	4.47e-12
14	1o91:C	131	130	0.1169	0.3588	0.3615	2.18e-18
15	1o91:C	131	132	0.1045	0.3206	0.3182	2.42e-12
16	1o91:C	131	128	0.0995	0.3053	0.3125	1.39e-10
17	1gr3:A	132	113	0.0945	0.2879	0.3363	9.81e-16
18	1gr3:A	132	118	0.1070	0.3258	0.3644	3.51e-13
19	1gr3:A	132	133	0.0945	0.2879	0.2857	1.37e-11
20	8a5a:U	690	74	0.0498	0.0290	0.2703	1.5	8a5o:U, 4am7:A, 4am7:B
21	4u03:A	389	30	0.0249	0.0257	0.3333	3.6	4txy:A, 4txz:A, 4ty0:A, 4u03:B, 4u0m:A, 4u0m:B, 4u0n:A, 4u0n:B, 4xj4:A
22	5cqx:B	116	29	0.0299	0.1034	0.4138	4.4	5cqx:A, 5cqy:A, 5cqy:B, 5cr2:A, 5cr2:B, 5cr2:C
23	5nxb:A	644	62	0.0448	0.0280	0.2903	5.2	4ccc:A, 4ccd:A, 4cce:A, 5nxb:B, 4ufh:A, 4ufi:A, 4ufj:A, 4ufk:A, 4ufl:A, 4ufm:A, 6y6s:A, 6y6t:A, 3zr5:A, 3zr6:A
24	8b6j:D	295	64	0.0423	0.0576	0.2656	7.6	8b6j:d, 8bqs:D, 8bqs:d, 8gym:qD, 8gym:qd, 8gym:Qd, 8gym:QD, 8gzu:qD, 8gzu:qd, 8gzu:QD, 8gzu:Qd, 7tgh:3D, 7tgh:3d

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