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BioLiP
>protein
DPYFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQTNLA

The query sequence (length=41) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 8i0r:v 173 41 1.0000 0.2370 1.0000 2.53e-26 7abg:F, 7abh:F, 6ff4:7, 6ff7:7, 8i0p:v, 8i0t:v, 7q4o:1, 7q4p:1, 8qo9:G, 6qx9:A2, 8qxd:8, 8r0a:8, 8r0b:8, 8rm5:8, 7vpx:B
2 8ch6:I 185 41 0.9268 0.2054 0.9268 2.15e-21 7abi:F, 7onb:M, 7qtt:I, 5z56:v, 5z57:v
3 5nrl:U 196 40 0.4634 0.0969 0.4750 1.47e-06
4 6g90:U 196 40 0.4634 0.0969 0.4750 1.66e-06 7oqb:U, 7oqe:U
5 7dco:v 207 40 0.4634 0.0918 0.4750 1.76e-06 5gm6:I, 5zwm:v, 5zwo:v
6 8qzs:r 114 35 0.3171 0.1140 0.3714 0.008 7abf:N, 7abg:N, 7abi:N, 8h6k:4N, 5o9z:N, 8q7n:r, 8qpe:r
7 1xed:A 111 39 0.2927 0.1081 0.3077 0.17 1xed:B
8 8idf:A 459 28 0.2683 0.0240 0.3929 0.26
9 8ost:A 390 30 0.2927 0.0308 0.4000 0.50
10 6iw6:A 438 30 0.2927 0.0274 0.4000 0.50 6iw6:B
11 8pv1:Cb 101 32 0.2927 0.1188 0.3750 0.62 8pv2:Cb, 8pv3:Cb, 8pv4:Cb, 8pv5:Cb, 8pv6:Cb, 8pv7:Cb, 8pv8:Cb, 8pvk:Cb, 8pvl:Cb
12 1zu1:A 127 24 0.2439 0.0787 0.4167 0.99
13 7mo3:B 38 31 0.2195 0.2368 0.2903 1.5 7mo3:D, 7mo4:B, 7mo4:D
14 6jmt:D 350 36 0.2195 0.0257 0.2500 1.9 6jmt:C, 6jmt:E, 6jmt:F, 6jmt:A, 6jmt:B
15 2ebv:A 57 31 0.2195 0.1579 0.2903 2.5
16 8opt:A 783 29 0.2195 0.0115 0.3103 9.1 8ops:A, 5w0m:B, 5w0n:C, 5w0o:A, 5w0o:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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