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BioLiP
>protein
DMQSLIENAEMSTESYDQGKDRDLVTEDTGVRNEAQEEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIE
TYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDYPTLAFHASLTNPFGKGAFIQLLRQFGKLHTDKKQISVGFIGY
PNVGKSSVINTLRSKKVCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKSPEDHIGAVL
ERAKPEYISKTYKIDSWENAEDFLEKLAFRTGKLLKGGEPDLQTVGKMVLNDWQRGRIPFFVKPPNA

The query sequence (length=307) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8fl2:NC 511 307 1.0000 0.6008 1.0000 0.0 8fkz:NC, 8fl0:NC, 8fl3:NC, 8fl4:NC, 8idt:A, 8idy:A, 8ie3:A, 8ine:A, 8inf:A, 8ink:w, 8ipd:w, 8ipx:w, 8ipy:w, 8ir1:w, 8ir3:w
2 7btb:m 469 280 0.5993 0.3923 0.6571 4.76e-136 7bt6:m, 6ft6:m, 3jct:m, 6m62:m, 7oh3:m, 7ohq:m, 7oht:m, 7ug6:m, 7uoo:m, 7uqb:m, 7uqz:m, 7uui:m, 7v08:m, 6ylg:m, 6ylh:m
3 6n8j:m 378 283 0.5896 0.4788 0.6396 2.54e-129
4 8pv1:Cd 462 299 0.5505 0.3658 0.5652 6.68e-121 8pv2:Cd, 8pv3:Cd, 8pv4:Cd, 8pv5:Cd, 8pv6:Cd, 8pv7:Cd, 8pv8:Cd, 8pvk:Cd, 8pvl:Cd
5 7of1:m 229 282 0.3876 0.5197 0.4220 2.83e-62
6 8fkt:NB 387 287 0.3192 0.2532 0.3415 1.14e-52 8fkp:NB, 8fku:NB, 8fkv:NB, 8fkw:NB, 8fkx:NB, 8fky:NB, 8fkz:NB, 8fl0:NB, 8ink:u, 8ipd:u, 8ipx:u, 8ipy:u
7 8i9w:CL 397 316 0.3062 0.2368 0.2975 1.61e-35 8i9t:CL, 8i9v:CL, 8i9x:CL, 8i9y:CL, 8i9z:CL, 8ia0:CL, 8pv1:CL, 8pv2:CL, 8pv3:CL, 8pv4:CL, 8pv5:CL, 8pv6:CL, 8pv7:CL, 8pv8:CL, 8pvk:CL, 8pvl:CL
8 6qtz:o 325 273 0.2671 0.2523 0.3004 1.83e-33 6qik:o, 6ri5:o, 6rzz:o, 6s05:o
9 6n8n:W 377 286 0.2736 0.2228 0.2937 1.11e-31 6n8o:W
10 5t62:W 306 263 0.2606 0.2614 0.3042 1.56e-31
11 8hfr:v9 106 91 0.1401 0.4057 0.4725 1.10e-24
12 6lsr:1 247 195 0.1954 0.2429 0.3077 2.78e-18
13 3cnl:A 233 258 0.2410 0.3176 0.2868 2.17e-16 3cnn:A, 3cno:A
14 1puj:A 261 259 0.2052 0.2414 0.2432 5.95e-14 6ppk:W
15 6g0z:A 290 262 0.2085 0.2207 0.2443 6.55e-12 6g0z:B, 6g12:A, 6g12:B, 6g14:B, 6g14:A, 6g15:A, 6g15:B
16 7pd3:z 311 233 0.2117 0.2090 0.2790 7.18e-09 8pk0:z, 8qsj:z
17 7o9k:C 255 225 0.1824 0.2196 0.2489 2.71e-06 7o9m:C
18 3pqc:B 194 71 0.0684 0.1082 0.2958 9.53e-06 3pqc:A
19 3j8g:X 418 173 0.1531 0.1124 0.2717 1.57e-05
20 6yxy:EQ 471 53 0.0684 0.0446 0.3962 4.02e-05
21 3iev:A 302 78 0.0814 0.0828 0.3205 9.75e-05 7c1o:A, 3r9w:A, 3r9x:A
22 6yxx:EM 308 252 0.1792 0.1786 0.2183 3.46e-04
23 3i8x:B 261 58 0.0684 0.0805 0.3621 6.55e-04 3hyt:A, 3hyt:B, 3hyt:C, 3i8x:A, 3i8x:C, 4r98:A, 4r98:B
24 7am2:BV 199 53 0.0619 0.0955 0.3585 0.001
25 6yxy:EM 330 268 0.1857 0.1727 0.2127 0.001
26 8ir1:4 620 142 0.1173 0.0581 0.2535 0.003 8fkt:SR, 8fku:SR, 8fkv:SR, 8fkw:SR, 8fkx:SR, 8fky:SR, 8fkz:SR, 8fl0:SR, 8fl2:SR, 8fl3:SR, 8fl6:SR, 8fl7:SR, 8fl9:SR, 8fla:SR, 8flb:SR, 8flc:SR, 8fld:SR, 8fle:SR, 8flf:SR, 8idt:4, 8idy:4, 8ie3:4, 8ine:4, 8inf:4, 8ink:4, 8ipd:4, 8ipx:4, 8ipy:4, 8ir3:4, 6lss:4, 6lu8:4
27 8fl4:SR 593 142 0.1205 0.0624 0.2606 0.004 8fkr:SR, 8fks:SR
28 5dn8:A 405 122 0.1042 0.0790 0.2623 0.004
29 5dn8:A 405 66 0.0717 0.0543 0.3333 0.005
30 8hfr:rA 647 102 0.0945 0.0448 0.2843 0.005 7bt6:b, 7btb:b, 6c0f:W, 6ft6:b, 3jct:b, 5jcs:o, 6m62:b, 6n8j:b, 6n8k:b, 7nad:b, 7oh3:b, 7ohq:b, 7oht:b, 7r72:b, 7u0h:b, 7ug6:b, 7uoo:b, 7uqb:b, 7uqz:b, 7v08:b, 4v7f:o, 8v87:b, 6ylx:b, 6yly:b, 7z34:b
31 1wf3:A 296 59 0.0717 0.0743 0.3729 0.005
32 6ylg:b 613 102 0.0945 0.0473 0.2843 0.005 7nac:b, 7of1:b, 7r7a:b, 6ylh:b
33 2wib:A 261 58 0.0651 0.0766 0.3448 0.006 2wib:B, 2wic:A
34 1h65:A 257 84 0.0749 0.0895 0.2738 0.007 3bb1:A, 3bb1:B, 3bb1:C, 3bb1:D, 3bb1:E, 3bb1:F, 3bb1:G, 3bb1:H, 1h65:B, 1h65:C
35 8v83:b 423 102 0.0945 0.0686 0.2843 0.007 6elz:b, 6em1:b, 6em5:b, 7ohp:b, 7ohr:b, 7ohs:b, 7ohu:b, 7ohv:b, 8v84:b
36 7am2:BT 300 222 0.1498 0.1533 0.2072 0.009
37 2j3e:A 249 77 0.0847 0.1044 0.3377 0.012 3bb3:A, 3bb4:A, 3def:A
38 7szs:A 204 94 0.0945 0.1422 0.3085 0.017 7szs:B
39 5m7h:A 420 156 0.1010 0.0738 0.1987 0.021 4dcs:A, 4dct:A, 4dcu:A, 2hjg:A, 5mbs:A, 5x4b:A, 5x4b:B
40 5m7h:A 420 122 0.0879 0.0643 0.2213 1.2 4dcs:A, 4dct:A, 4dcu:A, 2hjg:A, 5mbs:A, 5x4b:A, 5x4b:B
41 5ucv:A 187 57 0.0586 0.0963 0.3158 0.026
42 3a1s:A 255 100 0.1107 0.1333 0.3400 0.027 3a1s:B, 3a1t:A, 3a1u:A, 3a1u:B
43 1svw:A 190 63 0.0554 0.0895 0.2698 0.040 1svi:A, 1svw:B
44 7rr5:R 355 70 0.0619 0.0535 0.2714 0.052
45 2gj8:D 172 60 0.0651 0.1163 0.3333 0.059 2gj8:A, 2gj8:B, 2gj8:C, 2gj9:A, 2gj9:B, 2gj9:C, 2gj9:D, 2gja:A, 2gja:B
46 1mky:A 407 96 0.0847 0.0639 0.2708 0.080
47 2wjg:A 170 80 0.0749 0.1353 0.2875 0.093 2wjg:B, 2wjh:A, 2wjh:B, 2wji:A, 2wji:B, 2wjj:A, 2wjj:B
48 7ohy:b 375 79 0.0879 0.0720 0.3418 0.11
49 1t9h:A 287 80 0.0651 0.0697 0.2500 0.12
50 7oi6:y 331 78 0.0814 0.0755 0.3205 0.17 8pk0:t
51 8eti:b 391 52 0.0717 0.0563 0.4231 0.35 8esr:b, 8etg:b
52 8etc:b 415 52 0.0717 0.0530 0.4231 0.35 8esq:b, 8etj:b
53 8oun:A 181 47 0.0489 0.0829 0.3191 0.38 8oum:A, 8oum:B, 8oum:C, 8oum:D, 8oum:E, 8oun:B
54 2dby:A 355 33 0.0456 0.0394 0.4242 0.39
55 7nrc:So 347 65 0.0619 0.0548 0.2923 0.39
56 6xrs:B 392 128 0.1042 0.0816 0.2500 0.44 6xrs:A, 6xrs:D, 6xrs:C
57 6xrs:B 392 39 0.0489 0.0383 0.3846 1.1 6xrs:A, 6xrs:D, 6xrs:C
58 1xzq:A 449 60 0.0619 0.0423 0.3167 0.44 1xzq:B
59 1xzq:A 449 78 0.0684 0.0468 0.2692 1.5 1xzq:B
60 2ohf:A 327 136 0.1173 0.1101 0.2647 0.61
61 7y9i:A 362 21 0.0358 0.0304 0.5238 0.61
62 8e0a:A 168 70 0.0684 0.1250 0.3000 0.63 8e0b:A
63 8pv1:CH 627 81 0.0782 0.0383 0.2963 0.66 8i9r:CH, 8i9t:CH, 8i9v:CH, 8i9w:CH, 8i9x:CH, 8i9y:CH, 8i9z:CH, 8ia0:CH, 8pv2:CH, 8pv3:CH, 8pv4:CH, 8pv5:CH, 8pv6:CH, 8pv7:CH, 8pv8:CH, 8pvk:CH, 8pvl:CH
64 7odt:t 316 45 0.0423 0.0411 0.2889 0.88
65 8csq:a 263 64 0.0684 0.0798 0.3281 0.98
66 3geh:A 442 74 0.0749 0.0520 0.3108 1.8
67 3ieu:A 293 136 0.0977 0.1024 0.2206 2.0 3ieu:B
68 3aq4:A 170 110 0.0717 0.1294 0.2000 2.1 3aq4:B
69 3gvj:A 670 22 0.0326 0.0149 0.4545 2.2 3gvk:A, 3gvk:B, 3gvk:C, 3gvl:A, 3ju4:A, 1v0f:C, 1v0f:D, 1v0f:E, 1v0f:A, 1v0f:B, 1v0f:F
70 6h4d:A 274 100 0.1107 0.1241 0.3400 2.5
71 4jyb:A 323 76 0.0847 0.0805 0.3421 2.5 8dpb:A, 8dpb:B, 4jyb:B, 4jyc:D, 4lc1:A, 4lc1:B, 2qm7:A, 2qm7:B
72 8kab:h 430 25 0.0391 0.0279 0.4800 2.8
73 1fiw:A 260 57 0.0586 0.0692 0.3158 3.0
74 7o9k:G 337 32 0.0358 0.0326 0.3438 3.6 7of5:x, 7of7:x
75 1lnz:A 342 22 0.0326 0.0292 0.4545 4.1 1lnz:B
76 8kie:y 363 38 0.0423 0.0358 0.3421 4.4
77 3kxi:A 326 55 0.0554 0.0521 0.3091 4.4 2qth:A
78 3avt:A 1203 60 0.0619 0.0158 0.3167 5.2 7abz:6, 5afi:z, 3agp:A, 3agq:A, 3avu:A, 3avv:A, 3avw:A, 3avx:A, 3avy:A, 7bbn:A, 7bbn:B, 2bvn:A, 2bvn:B, 1efm:A, 1etu:A, 4fwt:A, 2hcj:A, 2hcj:B, 2hdn:A, 2hdn:B, 2hdn:C, 2hdn:D, 2hdn:E, 2hdn:F, 2hdn:G, 2hdn:H, 2hdn:I, 2hdn:J, 2hdn:K, 2hdn:L, 5i4r:C, 5i4r:D, 5i4r:G, 5i4r:H, 3mmp:G, 5opd:A, 5opd:B, 4pc2:A, 4pc2:B, 4pc3:A, 4pc3:B, 4pc6:A, 4pc6:B, 4pc7:A, 3u6b:B, 3u6b:A, 3vnu:A, 3vnv:A, 6wd4:8, 6wd7:8, 6wd9:8, 6wda:8
79 5lr8:A 844 55 0.0554 0.0201 0.3091 6.2 5lr8:B, 5lra:A, 5lra:B, 5lrb:B, 5lrb:A
80 1vbj:A 281 58 0.0619 0.0676 0.3276 7.0 1vbj:B
81 4v5p:AZ 385 63 0.0586 0.0468 0.2857 7.1 1ha3:B, 4v5g:AZ, 4v5g:CZ, 4v5p:CZ, 4v5q:AZ, 4v5q:CZ, 4v5r:AZ, 4v5r:CZ, 4v5s:AZ, 4v5s:CZ, 4v68:AZ
82 6vs4:A 223 139 0.1010 0.1390 0.2230 7.7 6vs4:B
83 2dyk:A 150 22 0.0391 0.0800 0.5455 8.2 2dyk:B
84 2e87:A 356 97 0.0782 0.0674 0.2474 8.7

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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