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BioLiP
>protein
DLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAPCVGLAAPQIGVPLRIIVLEDTKEYISYAPKEEILA
QERRHFDLMVMVNPVLKERSNKKALFFEGCESVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGN
LYVDKMVPRTFRTVDNLDLPLAEGCPKLGSHHH

The query sequence (length=193) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4je6:A 193 193 1.0000 1.0000 1.0000 2.12e-143 4je6:B, 4je7:A, 4je7:B, 4je8:A, 4je8:B, 1zxz:A, 1zxz:B, 1zy0:A, 1zy0:B, 1zy1:A, 1zy1:B
2 3g5k:A 183 166 0.3627 0.3825 0.4217 8.58e-42 3g5k:B, 3g5k:C, 3g5k:D, 3g5p:A, 3g5p:B, 3g5p:C, 3g5p:D
3 1y6h:A 177 165 0.3109 0.3390 0.3636 3.42e-28 1sv2:A, 1sv2:B, 1szz:A, 1szz:B, 1szz:C, 1szz:D, 1szz:E, 1szz:F, 1szz:G, 1szz:H, 1vev:A, 1vev:B, 1vey:A, 1vey:B, 1vez:A, 1vez:B, 1y6h:B
4 6jfc:B 161 164 0.3005 0.3602 0.3537 4.78e-26 6jfa:A, 6jfc:A, 6jfd:C, 6jfe:B, 6jff:B, 6jfn:B
5 5kob:A 171 161 0.3057 0.3450 0.3665 1.18e-25 5kob:B, 5kob:C, 5kob:D, 5vcp:A, 5vcp:B, 5vcp:C, 5vcp:D
6 3cpm:A 184 171 0.3005 0.3152 0.3392 7.16e-23 3m6o:A, 3m6o:B, 3m6p:A, 3m6p:B, 3m6q:A, 3m6r:A, 3m6r:B, 3m6r:C, 3m6r:D, 3o3j:A, 3pn2:A, 3pn3:A, 3pn3:B, 3pn4:A, 3pn5:A, 3pn6:A, 3pn6:B
7 3qu1:A 168 166 0.3005 0.3452 0.3494 1.33e-22 3qu1:B
8 6ck7:A 172 155 0.3212 0.3605 0.4000 2.99e-22 6ck7:B, 6ck7:C, 6ck7:D
9 3uwb:A 149 162 0.3005 0.3893 0.3580 4.84e-22 3uwa:A
10 1ix1:A 169 162 0.2850 0.3254 0.3395 2.83e-21 1ix1:B, 1lry:A, 1n5n:A, 1n5n:B, 1s17:A, 1s17:B
11 5cy7:A 171 164 0.2850 0.3216 0.3354 3.75e-20 5cp0:A, 5cpd:A, 5cvk:A, 5cvp:A, 5cvq:A, 5cwx:A, 5cwy:A, 5cx0:A, 5cxj:A, 5cy8:A, 6ikt:A, 6iky:A, 6il0:A, 6il2:A, 4nt8:A
12 4wxl:C 165 142 0.2591 0.3030 0.3521 8.04e-20 4wxl:A, 4wxl:B, 4wxl:D
13 5hgw:A 174 161 0.3109 0.3448 0.3727 1.84e-19 5hgw:B, 5i2b:A, 5t8z:A
14 3fwx:A 165 147 0.2694 0.3152 0.3537 1.92e-19 3fwx:B
15 1bs4:A 168 175 0.3264 0.3750 0.3600 3.49e-19 2ai8:A, 2ai8:B, 2ai8:C, 4al2:B, 4al3:A, 4az4:A, 1bs4:B, 1bs4:C, 1bs5:A, 1bs5:B, 1bs5:C, 1bs6:A, 1bs6:B, 1bs6:C, 1bs8:A, 1bs8:B, 1bs8:C, 1bsj:A, 1bsk:A, 1bsz:A, 1bsz:B, 1bsz:C, 7d6z:g, 1def:A, 2def:A, 1dff:A, 1g27:A, 1g27:B, 1g27:C, 1g2a:A, 1g2a:B, 1g2a:C, 3k6l:A, 3k6l:B, 2kmn:A, 1lru:A, 1lru:B, 1lru:C, 8ofe:A, 8rhr:A, 2w3t:A, 2w3u:A, 1xem:A, 1xen:A, 1xeo:A
16 5j46:A 169 167 0.2953 0.3373 0.3413 3.49e-19
17 3e3u:A 196 187 0.3212 0.3163 0.3316 3.64e-19
18 1jym:A 179 164 0.2539 0.2737 0.2988 8.41e-18 1jym:B, 1jym:C, 1jym:D, 1jym:E, 1jym:F, 1jym:G, 1jym:H, 1jym:I, 1jym:J, 1rl4:A, 1rl4:B, 1rqc:A, 1rqc:B, 1rqc:C, 1rqc:D, 1rqc:E, 1rqc:F, 1rqc:G, 1rqc:H, 1rqc:I, 1rqc:J
19 6jes:A 159 158 0.2850 0.3459 0.3481 1.00e-17 6jes:B, 6jf3:A, 6jf3:B, 6jf4:B, 6jf4:A, 6jf5:B, 6jf5:A, 6jf6:C, 6jf6:A, 6jf6:B, 6jf6:D, 6jf7:A, 6jf7:B, 6jf8:A, 6jf8:B, 6jf8:C, 6jf8:D
20 3oca:A 179 136 0.2332 0.2514 0.3309 1.74e-17 3oca:B, 3u04:A
21 2ew5:A 166 165 0.2642 0.3072 0.3091 2.18e-16 4e9a:A, 4e9b:A, 2ew6:A, 2ew7:A
22 6jex:A 172 164 0.2591 0.2907 0.3049 4.22e-16 6jer:A, 6jer:B, 6jet:A, 6jet:B, 6jeu:A, 6jeu:B, 6jev:A, 6jev:B, 6jew:A, 6jew:B, 6jex:B
23 4dr8:A 188 161 0.2746 0.2819 0.3292 2.15e-15 4dr8:B, 4dr8:C, 4dr8:D, 4dr9:A, 4dr9:B, 4dr9:C, 4dr9:D
24 5mtc:A 137 156 0.2694 0.3796 0.3333 7.10e-15 5mtc:B, 5mtd:A, 5mtd:B, 5mte:A, 5mte:B
25 2os3:A 205 192 0.3057 0.2878 0.3073 3.30e-14
26 5jex:A 203 181 0.2798 0.2660 0.2983 3.43e-14 5jez:A, 5jf0:A, 5jf1:A, 5jf2:A, 5jf3:A, 5jf4:A, 5jf5:A, 5jf6:A, 5jf7:A, 5jf8:A
27 1lqy:A 184 181 0.2850 0.2989 0.3039 3.32e-13
28 1ws1:A 151 140 0.2332 0.2980 0.3214 3.93e-13
29 6ow7:P 196 180 0.2850 0.2806 0.3056 1.86e-12 2ai7:A, 2aia:A, 2aie:P, 4eox:P, 1lm6:A, 6ow2:P, 6ow7:Q, 3str:P, 3svj:P, 3sw8:P
30 1lm4:A 190 178 0.2591 0.2632 0.2809 1.58e-11 6jfg:A, 6jfo:A, 6jfq:A, 6jfr:A, 6jfs:A, 1lm4:B, 1lmh:A, 1lqw:A, 1lqw:B, 1q1y:A, 3u7k:A, 3u7l:A, 3u7m:A, 3u7n:A
31 3l87:A 200 184 0.2850 0.2750 0.2989 2.58e-11
32 2okl:A 185 181 0.2539 0.2649 0.2707 3.82e-11 2okl:B
33 3cmd:B 188 178 0.2591 0.2660 0.2809 1.02e-10 3cmd:A, 3g6n:A, 3g6n:B
34 2os1:A 179 180 0.2539 0.2737 0.2722 6.98e-09
35 5meh:A 438 182 0.2280 0.1005 0.2418 5.2 4ayp:A, 4ayq:A, 4ayr:A, 8b5m:A, 5ne5:A
36 8kdb:A 2117 89 0.1295 0.0118 0.2809 6.0 8kdc:A
37 8btd:SC 210 36 0.0725 0.0667 0.3889 7.1 8br8:SC, 8brm:SC, 8bsi:SC, 8bsj:SC, 8btr:SC, 8fvy:D, 8g4s:D, 7pwf:D, 7pwo:D1
38 3x2f:A 406 30 0.0674 0.0320 0.4333 9.2 5tov:B, 5tow:B, 3x2e:A, 3x2e:B, 3x2e:C, 3x2e:D, 3x2f:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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