Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
DLPDVTLSLCGGLSISKEKFMEHIITYHEFAENPGLIDNPNLVIRIYNRYYNWALAAPMILSLQVFQKSLPKATVESWVK

The query sequence (length=80) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7kiq:E 83 80 1.0000 0.9639 1.0000 1.09e-56 7kiq:A, 7kiq:B, 7kiq:D, 7kiq:F, 7kiq:G, 7kiq:H, 7kiq:I, 7kiq:J
2 7kil:A 88 84 0.5750 0.5227 0.5476 9.86e-34
3 7c86:A 296 48 0.2125 0.0574 0.3542 0.84 6csn:A, 6cso:A, 7e6x:A, 7e6y:A, 7e6z:A, 7e70:A, 7e71:A, 3ug9:A, 4yzi:A
4 5b0w:A 261 18 0.1125 0.0345 0.5000 1.4 3a7k:A, 3a7k:D, 3a7k:B, 3abw:A, 3abw:D, 3abw:B, 5b0w:E, 5b0w:B, 5b0w:F, 5b0w:D, 5b0w:G, 5etz:A, 5etz:B, 5etz:D, 3qbg:A, 3qbg:B, 3qbg:D, 3qbi:A, 3qbi:B, 3qbi:D, 3qbk:A, 3qbk:D, 3qbk:B, 3qbl:A, 3qbl:B, 3qbl:D, 4qry:A, 4qry:E, 4qry:B, 4qry:F, 4qry:C, 4qry:G, 3vvk:A, 3vvk:D, 3vvk:B, 3vvk:E, 3vvk:C, 3vvk:F
5 6gys:A 421 23 0.1125 0.0214 0.3913 2.0
6 6so9:A 112 29 0.1250 0.0893 0.3448 2.2
7 5ahz:A 243 34 0.1625 0.0535 0.3824 2.6 5ahy:A, 1e12:A, 5g36:A, 2jaf:A, 2jag:A
8 8jh0:B 265 29 0.1375 0.0415 0.3793 5.1 8jh0:A
9 6wcd:A 314 67 0.2125 0.0541 0.2537 6.1
10 8egs:Y 586 25 0.1500 0.0205 0.4800 9.9

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218