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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
DLATGAKVFSANCAACHAGGINLVNAEKTLKKEALEKFGMNSIVAITTQVTNGKAGMPAFKGRLTDDQIAAVAAYVLDQA
EKGW

The query sequence (length=84) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3ph2:B 85 84 0.9881 0.9765 0.9881 1.93e-56 2v08:A, 2v08:B
2 1c6s:A 87 84 0.7381 0.7126 0.7381 3.15e-38 6tr1:A, 6tr1:C, 6tr1:E, 6tsy:A, 6tsy:B, 6tsy:C, 6tsy:D, 6tsy:E, 6tsy:F
3 4gyd:A 86 84 0.6667 0.6512 0.6667 1.39e-34 4gyd:B, 4gyd:C, 4gyd:D, 4gyd:E, 4gyd:F, 4h0j:A, 4h0j:B, 4h0j:C, 4h0j:D, 4h0j:E, 4h0j:F, 4h0k:A, 4h0k:B
4 7y5e:GN 84 84 0.6310 0.6310 0.6310 2.20e-34 7y5e:G2, 7y7a:G7, 7y7a:Go
5 1gdv:A 85 84 0.6429 0.6353 0.6429 1.80e-33
6 2zbo:A 86 84 0.6071 0.5930 0.6071 3.24e-33 2zbo:C, 2zbo:E, 2zbo:G, 2zbo:I, 2zbo:K
7 1kib:A 89 88 0.6190 0.5843 0.5909 2.11e-30 1f1f:A, 1kib:B, 1kib:C, 1kib:D, 1kib:E, 1kib:F, 1kib:G, 1kib:H
8 3dmi:A 87 86 0.5833 0.5632 0.5698 6.80e-30
9 1c6o:A 89 82 0.5952 0.5618 0.6098 1.99e-27 1c6o:B, 1c6r:A
10 1a2s:A 89 82 0.5714 0.5393 0.5854 6.33e-26 1ced:A, 1ctj:A
11 1ls9:A 91 81 0.5595 0.5165 0.5802 4.70e-25
12 1cyj:A 90 82 0.5357 0.5000 0.5488 3.66e-24 1cyi:A
13 3dr0:A 93 77 0.5119 0.4624 0.5584 3.15e-20 3dr0:B, 3dr0:C, 4eic:A, 4eid:A
14 4eie:A 82 80 0.4286 0.4390 0.4500 3.77e-20 4eif:A
15 4kmg:A 88 80 0.3095 0.2955 0.3250 1.10e-10
16 2dge:A 102 96 0.3690 0.3039 0.3229 1.82e-10 2ce0:A, 2ce1:A, 2dge:C, 2dge:B, 2dge:D, 2v07:A
17 3dp5:A 99 56 0.2500 0.2121 0.3750 3.32e-09 3cu4:A, 5mcs:A, 6u97:A
18 2zon:G 81 78 0.3095 0.3210 0.3333 2.36e-06
19 4j20:A 88 87 0.3452 0.3295 0.3333 2.57e-06 4j20:B
20 7o38:A 81 72 0.3333 0.3457 0.3889 3.75e-06
21 4lji:A 133 97 0.3333 0.2105 0.2887 3.67e-05 4lji:B
22 6hwh:i 162 83 0.3214 0.1667 0.3253 4.38e-05 6hwh:j
23 6adq:C 223 83 0.3214 0.1211 0.3253 4.42e-05 6adq:O, 6hwh:M, 6hwh:K, 8ovc:O, 8ovc:C, 8ovd:O, 8ovd:C, 7rh5:O, 7rh5:I, 7rh6:O, 7rh6:I, 7rh7:O, 7rh7:I
24 7y5e:VL 134 96 0.3095 0.1940 0.2708 5.93e-05 7y5e:V6, 7y5e:v6, 7y5e:vL, 7y7a:V9, 7y7a:v9, 7y7a:VE, 7y7a:vE, 7y7a:VO, 7y7a:vO, 7y7a:VZ, 7y7a:vZ, 7y7a:Vm, 7y7a:vm
25 8snh:G 304 82 0.2976 0.0822 0.3049 1.97e-04
26 5djq:C 303 85 0.3214 0.0891 0.3176 2.21e-04 5djq:M, 5djq:F, 5djq:I, 3mk7:C, 3mk7:M, 3mk7:F, 3mk7:I
27 5djq:C 303 80 0.2619 0.0726 0.2750 0.098 5djq:M, 5djq:F, 5djq:I, 3mk7:C, 3mk7:M, 3mk7:F, 3mk7:I
28 4yuu:V1 129 101 0.2976 0.1938 0.2475 2.36e-04 4yuu:v1, 4yuu:V2, 4yuu:v2
29 6jlu:V 137 31 0.1786 0.1095 0.4839 5.34e-04 8iwh:V, 8iwh:v, 6j3y:V, 6j3y:v, 6j3z:V, 6j3z:v, 6j40:V, 6j40:v, 8j5k:V, 8j5k:v, 6jlu:v, 7vd5:V, 7vd5:v
30 8hn3:A 80 78 0.2738 0.2875 0.2949 7.87e-04 8hn3:B
31 8wql:VD 135 100 0.3095 0.1926 0.2600 0.001 1f1c:A, 1f1c:B, 8wql:VE, 8wql:V1, 8wql:v1, 8wql:vD, 8wql:vE
32 4pwa:D 87 85 0.3690 0.3563 0.3647 0.001 4pw9:B, 4pwa:A, 4pwa:B, 4pwa:C
33 8smr:G 312 84 0.2738 0.0737 0.2738 0.003
34 8smr:G 312 81 0.2857 0.0769 0.2963 0.005
35 3a0b:V 137 31 0.1548 0.0949 0.4194 0.003 3a0b:v, 3a0h:V, 3a0h:v, 2axt:V, 2axt:v, 5b5e:V, 5b5e:v, 5b66:V, 5b66:v, 7cji:V, 7cji:v, 7cjj:V, 7cjj:v, 7cou:V, 7cou:v, 7d1t:V, 7d1t:v, 7d1u:V, 7d1u:v, 6dhe:V, 6dhe:v, 6dhf:V, 6dhf:v, 6dhg:V, 6dhg:v, 6dhh:V, 6dhh:v, 6dho:V, 6dho:v, 6dhp:V, 6dhp:v, 5e79:V, 5e79:v, 5e7c:V, 5e7c:v, 7eda:V, 9evx:V, 9evx:v, 8ez5:V, 8ez5:v, 8f4c:V, 8f4c:v, 8f4d:V, 8f4d:v, 8f4e:V, 8f4e:v, 8f4f:V, 8f4f:v, 8f4g:V, 8f4g:v, 8f4h:V, 8f4h:v, 8f4i:V, 8f4i:v, 8f4j:V, 8f4j:v, 8f4k:V, 8f4k:v, 4fby:V, 4fby:i, 8gn0:V, 8gn0:v, 8gn1:V, 8gn1:v, 8gn2:V, 8gn2:v, 5gth:V, 5gth:v, 5gti:V, 5gti:v, 5h2f:V, 5h2f:v, 4il6:V, 4il6:v, 8ir5:V, 8ir5:v, 8ir6:V, 8ir6:v, 8ir7:V, 8ir7:v, 8ir8:V, 8ir8:v, 8ir9:V, 8ir9:v, 8ira:V, 8ira:v, 8irb:V, 8irb:v, 8irc:V, 8irc:v, 8ird:V, 8ird:v, 8ire:V, 8ire:v, 8irf:V, 8irf:v, 8irg:V, 8irg:v, 8irh:V, 8irh:v, 8iri:V, 8iri:v, 4ixq:V, 4ixq:v, 4ixr:V, 4ixr:v, 1izl:V, 1izl:0, 6jlj:V, 6jlj:v, 6jlk:V, 6jlk:v, 6jll:V, 6jll:v, 6jlm:V, 6jlm:v, 6jln:V, 6jln:v, 6jlo:V, 6jlo:v, 6jlp:V, 6jlp:v, 5kaf:V, 5kaf:v, 5kai:V, 5kai:v, 3kzi:V, 5mx2:V, 5mx2:v, 1mz4:A, 4pbu:V, 4pbu:v, 4pj0:V, 4pj0:v, 7rf1:V, 7rf1:v, 7rf2:V, 7rf2:v, 7rf3:V, 7rf3:v, 7rf4:V, 7rf4:v, 7rf5:V, 7rf5:v, 7rf6:V, 7rf6:v, 7rf7:V, 7rf7:v, 7rf8:V, 7rf8:v, 4rvy:V, 4rvy:v, 1s5l:V, 1s5l:v, 5tis:V, 5tis:v, 4tnh:V, 4tnh:v, 4tni:V, 4tni:v, 4tnj:V, 4tnj:v, 4tnk:V, 4tnk:v, 4ub6:V, 4ub6:v, 4ub8:V, 4ub8:v, 5v2c:V, 5v2c:v, 4v62:AV, 4v62:BV, 4v82:AV, 4v82:BV, 6w1o:V, 6w1o:v, 6w1p:V, 6w1p:v, 6w1q:V, 6w1q:v, 6w1r:V, 6w1r:v, 6w1t:V, 6w1t:v, 6w1u:V, 6w1u:v, 6w1v:V, 6w1v:v, 1w5c:T, 1w5c:V, 5ws5:V, 5ws5:v, 5ws6:V, 5ws6:v, 3wu2:V, 3wu2:v, 7yq2:V, 7yq2:v, 7yq7:V, 7yq7:v, 5zzn:V, 5zzn:v
36 8xr6:V 137 31 0.1429 0.0876 0.3871 0.008 8wb4:V, 8wb4:v, 8xr6:v
37 8hdd:B 121 94 0.3095 0.2149 0.2766 0.011
38 2zoo:A 438 84 0.3333 0.0639 0.3333 0.014
39 7vzg:c 145 73 0.2976 0.1724 0.3425 0.017 7vzr:c
40 1yiq:A 684 81 0.2738 0.0336 0.2840 0.027
41 2zzs:A 81 66 0.2976 0.3086 0.3788 0.12 2zzs:B, 2zzs:C, 2zzs:D, 2zzs:E, 2zzs:F, 2zzs:G, 2zzs:H, 2zzs:I, 2zzs:J, 2zzs:K, 2zzs:L, 2zzs:M, 2zzs:N, 2zzs:O, 2zzs:P, 2zzs:Q, 2zzs:R, 2zzs:S, 2zzs:T, 2zzs:U, 2zzs:V, 2zzs:W, 2zzs:X, 2zzs:Y, 2zzs:Z, 2zzs:1, 2zzs:2, 2zzs:3, 2zzs:4, 2zzs:5, 2zzs:6
42 6xkw:p 254 76 0.3095 0.1024 0.3421 0.13 6xkx:p, 6xkz:p
43 6xkw:p 254 78 0.3333 0.1102 0.3590 0.78 6xkx:p, 6xkz:p
44 8gy2:B 433 93 0.3214 0.0624 0.2903 0.13
45 8eqm:V 131 35 0.1548 0.0992 0.3714 0.18 8eqm:v
46 2xts:D 204 17 0.1190 0.0490 0.5882 0.26 2xts:B
47 7e1w:O 223 79 0.2976 0.1121 0.3165 0.35 7e1v:O, 7e1v:C, 7e1w:C, 7e1x:O, 7e1x:C, 8hcr:C, 8hcr:O
48 1wve:C 75 74 0.2381 0.2667 0.2703 0.40 1dii:C, 1dii:D, 1diq:C, 1diq:D, 1wve:D
49 1gks:A 78 68 0.1905 0.2051 0.2353 0.50
50 7qhm:C 233 81 0.2738 0.0987 0.2840 0.56 7q21:C, 7q21:c, 7qhm:P, 7qho:C, 7qho:P
51 1kb0:A 670 80 0.2619 0.0328 0.2750 0.57
52 7w2j:C 418 88 0.2976 0.0598 0.2841 0.61 8jej:C, 8jek:C, 8k6j:C, 8k6k:C, 7w2j:F, 7wsq:C, 7wsq:F, 8xcm:C, 8xcn:C
53 7vzg:C 193 78 0.2500 0.1088 0.2692 0.67 7vzr:C
54 4ax3:D 457 84 0.2738 0.0503 0.2738 0.84 4ax3:A, 4ax3:B, 4ax3:C, 6f1q:A, 6fja:A, 5obo:A, 5ocb:A, 5ocf:A, 8qgf:A, 6qpt:A, 6qpt:B, 6qpt:C, 6qpt:D, 6qpt:E, 6qpt:F, 6qpu:A, 6qpu:B, 6qpu:C, 6qpu:D, 6qpu:E, 6qpu:F, 6qpv:A, 6qpv:I, 6qpx:A, 6qpx:I, 6qpz:A, 6qpz:I, 6qq0:A, 6qq1:A, 6qq2:A, 7qq2:A, 7r2u:A, 2yqb:A, 3zbm:A, 3ziy:A
55 8h10:A 1026 74 0.3095 0.0253 0.3514 0.86 8h0y:B, 8h0z:A, 8h10:B, 8h10:C, 7zh1:A, 7zh1:B, 7zh1:C, 7zh2:A, 7zh2:B, 7zh2:C
56 3ala:D 711 34 0.1667 0.0197 0.4118 0.87 3ala:A, 3ala:B, 3ala:C, 3ala:E, 3ala:F, 3ala:G, 4btw:A, 4btw:B, 4btx:A, 4btx:B, 4bty:A, 4bty:B, 2c10:A, 2c10:B, 2c10:C, 2c10:D, 2c11:A, 2c11:B, 2c11:C, 2c11:D, 1pu4:A, 1pu4:B, 1us1:A, 1us1:B, 2y73:A, 2y73:B, 2y74:A, 2y74:B
57 8gy3:A 440 78 0.2738 0.0523 0.2949 0.91
58 1n83:A 251 22 0.1190 0.0398 0.4545 0.93 1s0x:A, 4s15:A, 4s15:B
59 2yev:B 319 14 0.1071 0.0282 0.6429 1.4 2yev:E
60 8eug:a 147 63 0.2381 0.1361 0.3175 1.6 8esq:a, 8eui:a
61 8esr:a 97 75 0.2381 0.2062 0.2667 1.6 8etc:a, 8etg:a, 8etj:a
62 1ici:A 256 64 0.2381 0.0781 0.3125 2.0 1ici:B, 1m2g:A, 1m2h:A, 1m2j:A, 1m2k:A, 1m2n:A, 1m2n:B, 4twi:A
63 1cyc:A 103 17 0.1071 0.0874 0.5294 3.0 1cyc:B, 3cyt:O, 3cyt:I, 5cyt:R, 1i54:A, 1i54:B, 1i55:A, 1i55:B, 1lfm:A, 1lfm:B
64 1akk:A 104 18 0.0952 0.0769 0.4444 3.1 2b4z:A, 5c0z:A, 5c0z:D, 5c0z:B, 5c0z:C, 5c9m:A, 5c9m:D, 5c9m:B, 5c9m:C, 1crc:A, 1crc:B, 5df5:A, 5df5:B, 5df5:C, 5df5:D, 8dvx:A, 8dvx:D, 8dvx:B, 8dvx:C, 8dzl:A, 8dzl:B, 8dzl:C, 8dzl:D, 6ff5:A, 1fi7:A, 1fi9:A, 2frc:A, 1giw:A, 2giw:A, 1hrc:A, 1i5t:A, 5iy5:1, 5iy5:2, 3j2t:H, 3j2t:I, 3j2t:J, 3j2t:K, 3j2t:L, 3j2t:M, 3j2t:N, 3jbt:B, 3jbt:D, 3jbt:F, 3jbt:H, 3jbt:J, 3jbt:L, 3jbt:N, 5juy:H, 5juy:I, 5juy:J, 5juy:K, 5juy:L, 5juy:M, 5juy:N, 6k9i:A, 6k9j:A, 1lc1:A, 1lc2:A, 7ljx:A, 7ljx:B, 1m60:A, 6n1o:A, 6n1o:B, 6n1o:C, 6n1o:D, 2n3b:A, 3nbs:A, 3nbs:B, 3nbs:C, 3nbs:D, 3nbt:A, 3nbt:E, 3nbt:B, 3nbt:C, 3nbt:D, 3nbt:F, 4nfg:B, 3o1y:A, 3o1y:B, 3o1y:C, 3o20:A, 3o20:B, 3o20:C, 1ocd:A, 2pcb:B, 4rsz:A, 4rsz:B, 4rsz:C, 4rsz:D, 4rsz:E, 4rsz:F, 6suv:AaA, 6suv:BaB, 6suv:CaC, 6suv:DaD, 6suv:EaE, 6suv:FaF, 6suv:GaG, 6suv:HaH, 1u75:B, 3wc8:A, 1wej:F, 3wui:A, 5wve:B, 5wve:D, 5wve:F, 5wve:H, 5wve:J, 5wve:L, 5wve:N, 2ybb:Y, 5zkv:A
65 5h83:A 354 31 0.1310 0.0311 0.3548 3.1 5h83:B
66 9av7:A 304 31 0.1548 0.0428 0.4194 3.4
67 4be6:B 234 61 0.2024 0.0726 0.2787 6.0 4bei:A, 4bei:B, 4bei:C, 4bei:D, 4bei:E, 4bei:F, 4bei:G, 4bei:H, 5g50:A
68 2l4d:A 106 17 0.0714 0.0566 0.3529 6.7
69 7r8y:A 228 39 0.1905 0.0702 0.4103 8.0
70 6zzx:9 183 24 0.1429 0.0656 0.5000 8.2 6zzy:9
71 7pci:A 345 45 0.1786 0.0435 0.3333 8.4 7pcc:A, 7pcc:B, 7pce:A, 7pcg:A, 7pcg:B, 7pcl:A, 7pcl:B, 7pcm:A, 7pcm:B, 7pcn:A, 7pcn:B, 7pco:A, 7pco:B, 7pct:A, 7pct:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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