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BioLiP
>protein
DLAEETLKIFRANKFELGLVPDIPPPPALVA

The query sequence (length=31) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 6b4e:D 31 31 1.0000 1.0000 1.0000 5.88e-16
2 8tn3:A 388 16 0.3226 0.0258 0.6250 0.55 8tn3:B, 7uky:A, 7uky:B
3 6c7n:D 389 17 0.3226 0.0257 0.5882 1.2
4 6c7n:A 553 17 0.3226 0.0181 0.5882 1.3 6c7n:B, 6c7n:C
5 8btg:B 335 14 0.2581 0.0239 0.5714 2.4 8btg:A, 8btg:C, 8btg:D, 8btg:E, 8btg:F, 8btg:G, 8bv3:A, 8bv3:B, 8bv3:C, 8bv3:D, 8bv3:E
6 7ly7:A 908 26 0.3548 0.0121 0.4231 4.8
7 1e7u:A 872 17 0.3226 0.0115 0.5882 7.2 4anv:A, 3ibe:A
8 1e8w:A 851 17 0.3226 0.0118 0.5882 7.2 2a5u:A, 4anu:A, 4anw:A, 4anx:A, 4aof:A, 3apc:A, 3apd:A, 3apf:A, 6aud:A, 6c1s:A, 2chw:A, 2chx:A, 2chz:A, 3csf:A, 3cst:A, 3dbs:A, 4dk5:A, 3dpd:A, 1e7v:A, 1e8x:A, 1e8z:A, 1e90:A, 5eds:A, 3ene:A, 4ezj:A, 4ezk:A, 4ezl:A, 4f1s:A, 4fa6:A, 4fad:A, 4fjy:A, 4fjz:A, 4flh:A, 4ful:A, 4g11:A, 5g2n:A, 5g55:A, 4gb9:A, 4hle:A, 4j6i:A, 7jwz:A, 5kae:A, 7kke:A, 4kz0:A, 3l08:A, 3l13:A, 3l16:A, 3l17:A, 3l54:A, 3ml8:A, 3ml9:A, 3nzs:A, 3oaw:A, 5oq4:A, 3pre:A, 3prz:A, 3ps6:A, 4ps3:A, 4ps7:A, 4ps8:A, 3qaq:A, 3qar:A, 3r7q:A, 3r7r:A, 3s2a:A, 8sc8:A, 3t8m:A, 3tjp:A, 3tl5:A, 4urk:A, 2v4l:A, 4wwn:A, 6xrl:A, 4xx5:A, 4xz4:A, 7z61:A
9 8sob:A 1005 17 0.3226 0.0100 0.5882 8.0 8soa:A, 8soc:A
10 8sod:A 941 17 0.3226 0.0106 0.5882 9.4 8soe:A
11 2e4g:A 528 10 0.2581 0.0152 0.8000 9.7 2e4g:B, 7ju0:A, 7ju0:B, 2oa1:A, 2oa1:B, 2oal:A, 2oal:B, 6p00:A, 6p00:B, 6p2v:A, 6p2v:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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