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BioLiP
>protein
DIAGLTPCKDSKQFAKREKQSIKKLESSLKLYAPDSAPALAINATIEKTKRRFDNYGKQGLLCGADGLPHLIVSGDQRHW
GEFITPGILFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPLATGLVFRGFSWPIAAYRELLNGELVAKDV

The query sequence (length=154) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5l8r:F 154 154 0.9935 0.9935 0.9935 5.23e-111 7dkz:F, 4rku:F, 4y28:F, 6yac:F, 6yez:F, 6zoo:F, 6zxs:F
2 6ly5:f 162 150 0.8636 0.8210 0.8867 5.97e-99 3lw5:F, 2o01:F, 2wsc:F, 2wse:F, 2wsf:F, 4xk8:F, 4xk8:f
3 7wfe:BF 154 154 0.8571 0.8571 0.8571 2.90e-98 8j6z:F, 8j7a:F, 8j7b:F, 7wfd:AF, 7wg5:AF, 7wg5:BF, 8wgh:F
4 5zji:F 158 153 0.8247 0.8038 0.8301 1.41e-91
5 8bcv:F 158 153 0.7987 0.7785 0.8039 6.90e-90 7ew6:F, 7ewk:F, 7f9o:F, 7f9o:j
6 8htu:F 161 153 0.7338 0.7019 0.7386 5.03e-82 7ksq:F, 7kux:F, 6l35:F, 7xqp:F
7 7y5e:FN 158 150 0.5909 0.5759 0.6067 1.64e-64 7y5e:F2, 7y7a:F7, 7y7a:Fo
8 7yca:F 165 151 0.6104 0.5697 0.6225 1.82e-64
9 8wm6:F 161 150 0.5714 0.5466 0.5867 1.40e-63 8wmj:F, 8wmv:F, 8wmw:F
10 7y7b:F 160 152 0.5584 0.5375 0.5658 1.73e-62 7y8a:F
11 7bgi:F 165 157 0.5909 0.5515 0.5796 9.52e-60 7blx:F, 7d0j:F, 7dz7:F, 7dz8:F, 8h2u:F, 6ijj:F, 6ijo:F, 6jo5:F, 6jo6:F, 7r3k:F, 7wyi:F, 7wzn:F, 7zq9:F, 7zqc:F, 7zqd:F, 7zqd:F2
12 7dr0:F 161 153 0.5519 0.5280 0.5556 1.07e-58 7dr1:F, 7dr2:aF, 7dr2:bF, 7dr2:cF, 7dr2:dF
13 6l4u:F 161 153 0.5519 0.5280 0.5556 5.65e-58
14 6qph:F 163 157 0.5584 0.5276 0.5478 2.76e-56 6rhz:F, 6sl5:F, 6yxr:F
15 6igz:F 163 157 0.5260 0.4969 0.5159 5.53e-55
16 7a4p:F 165 158 0.5519 0.5152 0.5380 6.93e-55 6zzx:F, 6zzy:F
17 8cmo:F 165 156 0.5455 0.5091 0.5385 1.43e-53
18 7blz:F 155 149 0.4870 0.4839 0.5034 2.14e-52 6fos:F, 5zgb:F, 5zgh:F
19 8wey:F 158 149 0.4805 0.4684 0.4966 8.54e-51
20 4fe1:F 141 153 0.4870 0.5319 0.4902 4.57e-47 7fix:F1, 7fix:F2, 7fix:F3, 1jb0:F, 6k33:bF, 6k33:aF, 6k33:cF, 7m75:F, 7m76:F, 7m78:F, 3pcq:F, 6pfy:Q, 6pfy:F, 6pfy:d, 6pgk:Q, 6pgk:F, 6pgk:d, 6tra:F, 6trc:F, 6trc:f, 6trc:6, 6trd:F, 6trd:f, 6trd:6, 5zf0:F1, 5zf0:F2, 5zf0:F3, 5zf0:F4, 5zf0:F6, 5zf0:F5
21 6kif:F 136 152 0.4870 0.5515 0.4934 2.59e-46 6kif:R, 6kif:j, 6kig:F, 6kig:R, 6kig:j
22 7qco:F 141 151 0.4610 0.5035 0.4702 1.48e-42 7qco:O, 7qco:o, 7qco:f
23 6vpv:F 141 153 0.4481 0.4894 0.4510 9.94e-40 6vpv:f, 6vpv:6
24 6hqb:F 143 153 0.4351 0.4685 0.4379 6.93e-38 8am5:f, 8asl:f, 8asp:f, 4kt0:F, 6nwa:F, 6nwa:f, 6nwa:Q, 5oy0:F, 5oy0:f, 5oy0:6, 7umh:F, 7umh:Q, 7umh:f, 6uzv:F, 6uzv:6, 6uzv:f
25 6jeo:bF 141 151 0.4286 0.4681 0.4371 3.12e-36 6jeo:aF, 6jeo:cF, 6jeo:dF, 6k61:F, 6k61:f, 6tcl:F1, 6tcl:F2, 6tcl:F, 6tcl:FF, 7y3f:F
26 8jze:f 184 147 0.4286 0.3587 0.4490 2.29e-35 8jzf:f
27 8jjr:f 169 147 0.4091 0.3728 0.4286 1.91e-33
28 8jw0:f 185 151 0.3831 0.3189 0.3907 3.52e-30
29 4l6v:F 125 73 0.2792 0.3440 0.5890 5.62e-26 8am5:j, 8asl:j, 8asp:j, 6hqb:J, 4kt0:J, 4l6v:f, 4l6v:6, 6nwa:J, 6nwa:j, 6nwa:S, 5oy0:J, 5oy0:j, 5oy0:7, 7umh:J, 7umh:S, 7umh:j, 6uzv:J, 6uzv:j, 6uzv:7
30 7lx0:Q 135 150 0.3831 0.4370 0.3933 2.16e-24 7lx0:f, 7lx0:F, 6pnj:Q, 6pnj:f, 6pnj:F
31 7f4v:aF 151 142 0.3571 0.3642 0.3873 2.57e-23 7f4v:bF, 7f4v:cF
32 7s3d:F 124 92 0.2662 0.3306 0.4457 3.91e-18 7s3d:Q, 7s3d:f
33 7dwq:F 103 123 0.2987 0.4466 0.3740 1.09e-17
34 3ahc:A 802 41 0.0909 0.0175 0.3415 0.70 3ahd:A, 3ahe:A, 3ahf:A, 3ahg:A, 3ahh:A, 3ahi:A, 3ahj:A
35 7lt2:A 387 25 0.0844 0.0336 0.5200 1.00
36 1aq3:A 129 62 0.1234 0.1473 0.3065 1.0 1aq3:C, 1aq4:A, 1aq4:C, 2b2d:A, 2b2d:B, 2b2d:C, 2b2e:A, 2b2e:B, 2b2e:C, 2b2g:A, 2b2g:B, 2b2g:C, 2bny:A, 2bny:B, 2bny:C, 2bq5:A, 2bq5:B, 2bq5:C, 2bs0:A, 2bs0:B, 2bs0:C, 2bs1:A, 2bs1:B, 2bs1:C, 2bu1:A, 2bu1:B, 2bu1:C, 2c4q:A, 2c4q:B, 2c4q:C, 2c4y:A, 2c4y:B, 2c4y:C, 2c4z:A, 2c4z:B, 2c4z:C, 2c50:A, 2c50:B, 2c50:C, 2c51:A, 2c51:B, 2c51:C, 2iz8:A, 2iz8:B, 2iz8:C, 2iz9:A, 2iz9:C, 2izm:A, 2izm:B, 2izm:C, 2izn:A, 2izn:B, 2izn:C, 5msf:A, 5msf:C, 6msf:A, 6msf:C, 7msf:A, 7msf:C, 5tc1:D, 5tc1:E, 5tc1:G, 5tc1:H, 1u1y:A, 1u1y:C, 1zdh:A, 1zdh:C, 1zdi:A, 1zdi:C, 1zdj:A, 1zdj:C, 1zdk:A, 1zdk:C, 1zse:A, 1zse:B
37 5ayk:A 744 65 0.1558 0.0323 0.3692 3.1 5ayl:A
38 8hku:L21E 97 51 0.1104 0.1753 0.3333 3.1 8hkv:L21E, 8hky:L21E, 8hkz:L21E, 8hl1:L21E, 8hl2:L21E, 8hl3:L21E, 8hl4:L21E, 8hl5:L21E
39 6a5e:A 375 53 0.0974 0.0400 0.2830 5.1 6a5e:B
40 3oib:A 381 24 0.0714 0.0289 0.4583 8.5 3oib:B, 3p4t:A, 3p4t:B
41 1a4i:B 295 85 0.1558 0.0814 0.2824 9.3 1a4i:A, 1dia:A, 1dia:B, 1dib:A, 1dib:B, 1dig:A, 1dig:B, 6ecp:A, 6ecp:B, 6ecq:A, 6ecq:B, 6ecr:A, 6ecr:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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