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BioLiP
>protein
DFTLRNARMDDIDQIIKINRLTLPENYPYYFFVEHLKEYGLAFFVAIVDNSVVGYIMPRIEWGFSNIKQLPSLVRKGHVV
SIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYLEVRVSNYPAIALYEKLNFKKVKVLKGYYADGEDAYLMARPL

The query sequence (length=157) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5c88:A 158 157 1.0000 0.9937 1.0000 2.69e-114 6ag4:A, 6ag5:A, 5c88:B, 4lx9:A, 4r3k:A, 4r3l:A, 2x7b:A
2 6c95:B 160 158 0.3758 0.3688 0.3734 2.44e-27 6ppl:C, 6pw9:C
3 5nnp:B 179 162 0.4013 0.3520 0.3889 1.97e-22 5nnp:F
4 4kvm:E 153 154 0.3312 0.3399 0.3377 3.60e-21 4kvm:F, 4kvm:G, 4kvm:H, 4kvo:E, 4kvo:F, 4kvo:G, 4kvo:H, 4kvx:A, 4kvx:B
5 4hnx:B 213 172 0.3376 0.2488 0.3081 6.61e-20 4hnw:B, 6o07:B, 4xnh:B, 4xpd:B, 4y49:B, 4y49:H, 4y49:N
6 7l1k:A 149 143 0.3057 0.3221 0.3357 1.84e-18
7 4pv6:G 154 153 0.2930 0.2987 0.3007 3.66e-14 4pv6:C, 4pv6:I, 4pv6:F, 4pv6:A, 4pv6:H, 4pv6:J, 4pv6:E
8 7mx2:A 152 151 0.2930 0.3026 0.3046 7.21e-14 7rb3:A
9 6zmp:A 190 165 0.3057 0.2526 0.2909 2.85e-13 6zmp:B
10 2ob0:C 166 149 0.2739 0.2590 0.2886 8.45e-12 2ob0:A, 2ob0:B, 6ppl:A, 2psw:A, 2psw:B, 2psw:C, 3tfy:A, 3tfy:B, 3tfy:C, 6wf3:A, 6wf3:B, 6wf3:C, 6wf3:D, 6wf3:E, 6wf3:F, 6wf5:A, 6wf5:B, 6wfg:A, 6wfg:C, 6wfg:E, 6wfk:A, 6wfk:B, 6wfk:C, 6wfn:A, 6wfo:A, 6wfo:B, 6wfo:C, 4x5k:A
11 8g0l:A 158 164 0.3185 0.3165 0.3049 1.56e-11 7stx:A, 6vp9:A
12 6ygb:A 159 150 0.2803 0.2767 0.2933 5.42e-10 6ygc:A, 6ygd:A
13 6th0:A 176 169 0.2930 0.2614 0.2722 1.04e-09 6tgx:A, 6tgx:B, 6th0:B
14 5k18:B 179 145 0.2484 0.2179 0.2690 1.15e-09 5k04:B, 5k18:D
15 2cnm:A 151 80 0.2038 0.2119 0.4000 2.11e-09 2cnm:B, 2cnm:C, 2cns:A, 2cns:B, 2cns:C, 2cnt:A, 2cnt:B, 2cnt:C, 2cnt:D
16 3ld2:B 162 153 0.2930 0.2840 0.3007 6.92e-08 3ld2:A, 3ld2:C, 3ld2:D
17 6z00:A 156 157 0.2548 0.2564 0.2548 2.44e-07 6yzz:A, 6z00:B
18 5hgz:A 211 156 0.2548 0.1896 0.2564 3.03e-07 5hh0:A, 5hh1:A, 5icv:A, 5icv:B, 5icw:A, 5icw:B, 5icw:C, 5icw:D
19 6bvc:A 154 95 0.1911 0.1948 0.3158 1.52e-06 1bo4:A, 1bo4:B
20 1wwz:A 157 96 0.2293 0.2293 0.3750 1.82e-06 1wwz:B
21 2ge3:A 164 109 0.1911 0.1829 0.2752 2.84e-06 2ge3:B, 2ge3:C
22 2vi7:C 165 98 0.2038 0.1939 0.3265 1.07e-05
23 8a9n:A 150 118 0.1656 0.1733 0.2203 4.69e-04 8a9n:B, 8a9o:A, 8a9o:B
24 3pp9:A 176 101 0.1529 0.1364 0.2376 0.003 3pp9:B, 3pp9:C
25 5hmn:B 159 61 0.1338 0.1321 0.3443 0.003 5hmn:A, 5hmn:C, 5hmn:E, 5hmn:F
26 7oju:A 214 172 0.2675 0.1963 0.2442 0.004
27 1tiq:A 173 143 0.2420 0.2197 0.2657 0.006 1tiq:B
28 8iyo:D 163 108 0.2038 0.1963 0.2963 0.007 8iyo:A, 8iyo:B, 8iyo:C
29 4qvt:D 146 143 0.2293 0.2466 0.2517 0.011 2pdo:H, 2pdo:B, 4qvt:A, 4qvt:B, 4qvt:C, 4qvt:E, 4qvt:F, 4qvt:G, 4qvt:H
30 6e1x:C 176 68 0.1274 0.1136 0.2941 0.042 5cnp:B, 5cnp:D, 5cnp:F, 6cx8:A, 6cx8:B, 6cx8:C, 6cx8:D, 6cx8:E, 6cx8:F, 6e1x:A, 6e1x:B, 6e1x:D, 4mhd:A, 4mhd:B, 4mhd:C, 4mi4:A, 4mi4:B, 4mi4:C, 4ncz:A, 4ncz:C, 4ncz:B, 4r57:A, 4r57:B, 4r57:C, 4r57:D, 4r57:E, 4r57:F, 4r57:G, 4r57:H, 4r57:I, 4r57:J, 4r57:K, 4r57:L, 4r87:A, 4r87:B, 4r87:C, 4r87:D, 4r87:E, 4r87:F, 4r87:G, 4r87:H, 4r87:I, 4r87:J, 4r87:K, 4r87:L, 5ug4:A, 5ug4:B, 5ug4:C, 4ygo:A, 4ygo:C, 4ygo:D, 4ygo:E
31 5jph:B 144 54 0.1146 0.1250 0.3333 0.26 5jph:A, 5jph:C
32 4qc6:A 179 69 0.1338 0.1173 0.3043 0.33 4qc6:B
33 2bue:A 179 63 0.1210 0.1061 0.3016 0.35 2prb:A, 2qir:A, 1v0c:A, 2vqy:A
34 6ao7:A 153 105 0.1465 0.1503 0.2190 0.54
35 7ovv:B 196 135 0.2357 0.1888 0.2741 0.54 7ovv:A
36 1i1d:D 161 63 0.1146 0.1118 0.2857 0.75 1i12:A, 1i12:B, 1i12:C, 1i12:D, 1i1d:A, 1i1d:B, 1i1d:C
37 6bff:A 178 70 0.1210 0.1067 0.2714 0.94 6bff:B, 6bfh:A
38 3wr7:A 170 85 0.1592 0.1471 0.2941 1.1 4r9m:A, 3wr7:C, 3wr7:B, 3wr7:D
39 6hf2:A 325 85 0.1210 0.0585 0.2235 1.2 6hf4:A
40 1yvk:A 152 69 0.1210 0.1250 0.2754 1.8 1yvk:B, 1yvk:C, 1yvk:D
41 2i79:A 171 82 0.1401 0.1287 0.2683 2.3 2i79:B, 2i79:C, 2i79:D, 2i79:E, 2i79:F
42 4ri1:B 179 53 0.1083 0.0950 0.3208 2.4 4ri1:A, 4ri1:C
43 7ypv:A 172 52 0.1083 0.0988 0.3269 2.8 7ypu:A, 7ypu:B, 7ypu:C, 7ypu:D, 7ypu:E, 7ypu:F, 7ypu:G, 7ypu:H, 7ypv:B, 7ypv:C, 7ypv:D, 7ypv:E, 7ypv:F, 7ypv:G, 7ypv:H
44 2ref:A 203 138 0.1975 0.1527 0.2246 3.3 2ref:B
45 1i36:A 258 87 0.1401 0.0853 0.2529 3.4 1i36:B
46 3f0a:A 159 153 0.1975 0.1950 0.2026 3.8 3k9u:A, 3k9u:B, 3ne7:A
47 6h2b:C 341 66 0.1019 0.0469 0.2424 4.4 6h2b:A, 6h2b:B, 6jjc:A, 6jjc:C, 6jjc:B, 6jjd:A, 6jjd:C, 6jjd:B
48 7cs1:A 191 37 0.0764 0.0628 0.3243 4.6 7cs0:A, 7cs0:B, 7cs1:B, 7csi:A, 7csi:B, 7csj:A, 7csj:B
49 4evy:A 147 62 0.0955 0.1020 0.2419 6.2 4evy:B
50 6c32:A 209 52 0.0955 0.0718 0.2885 7.1 6c37:A
51 5eq9:B 260 56 0.0955 0.0577 0.2679 7.1 5eq8:A, 5eq9:A, 5eq9:C, 5eq9:D, 5t3j:A
52 5gcn:A 166 48 0.0701 0.0663 0.2292 7.3 1m1d:A, 1m1d:C, 1pu9:A, 1pua:A, 1q2c:A, 1q2d:A, 1qsn:A, 1qsr:A
53 8imx:U 420 77 0.1274 0.0476 0.2597 7.6 8imy:U, 7w72:U, 7wld:U
54 6zr7:AAA 292 44 0.0892 0.0479 0.3182 7.6
55 5kf2:A 317 56 0.0955 0.0473 0.2679 7.9 5kf1:A, 5kf1:B, 5kf8:A, 5kf9:A, 5kga:A, 5kga:B, 5kgh:A, 5kgh:B, 5kgj:A, 5kgp:A, 5kgp:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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