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BioLiP
>protein
DFIGSSTNLIMVTSTTLMLFAGRFGLAPGLQTGDPAGFTLADTLACGTVGHIIGVGVVLGLKNIG

The query sequence (length=65) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7wfd:AK 65 65 1.0000 1.0000 1.0000 3.59e-40 7wfe:BK, 7wg5:AK, 7wg5:BK
2 8j6z:K 84 82 1.0000 0.7738 0.7927 1.98e-36 7dkz:K, 8j7b:K, 5l8r:K, 4rku:K, 6yac:K, 6yez:K, 6zoo:K, 6zxs:K
3 8bcv:K 88 82 0.8923 0.6591 0.7073 1.16e-33 7ew6:K, 7ewk:K, 7f9o:K, 7f9o:n, 2wse:K, 5zji:K
4 8wgh:K 83 80 0.8769 0.6867 0.7125 6.08e-31
5 8j7a:K 56 64 0.8615 1.0000 0.8750 8.19e-31
6 8htu:K 81 78 0.8154 0.6543 0.6795 3.60e-29 7ksq:K, 7kux:K, 6l35:K, 7xqp:K
7 4y28:K 57 61 0.7538 0.8596 0.8033 2.40e-25
8 6igz:K 80 78 0.6923 0.5625 0.5769 7.58e-21
9 4xk8:k 46 60 0.6615 0.9348 0.7167 6.92e-19 4xk8:K
10 8cmo:K 89 83 0.6615 0.4831 0.5181 1.34e-18
11 7a4p:K 86 84 0.6308 0.4767 0.4881 2.40e-17 6zzx:K, 6zzy:K
12 7dz7:K 86 83 0.6923 0.5233 0.5422 8.23e-16 7bgi:K, 7blx:K, 7d0j:K, 7dz8:K, 6ijj:K, 6ijo:K, 7r3k:K, 7zq9:K, 7zqc:K, 7zqd:K, 7zqd:K2
13 6sl5:K 84 72 0.4769 0.3690 0.4306 3.47e-08
14 8wm6:K 69 61 0.3692 0.3478 0.3934 1.73e-07 8wmj:K, 8wmv:K, 8wmw:K
15 8wey:K 63 61 0.3846 0.3968 0.4098 4.56e-07
16 7yca:K 87 80 0.4154 0.3103 0.3375 3.58e-06
17 7y5e:KN 70 69 0.4000 0.3714 0.3768 5.10e-06 7y5e:K2, 7y7a:K7, 7y7a:Ko
18 7y7b:K 78 62 0.3846 0.3205 0.4032 1.48e-05 7y8a:K
19 6l35:G 98 34 0.2462 0.1633 0.4706 2.27e-05 8htu:G, 7ksq:G, 7kux:G, 7xqp:G
20 6kif:K 78 65 0.3692 0.3077 0.3692 3.79e-05 6kif:U, 6kif:m, 6kig:K, 6kig:U, 6kig:m
21 7yca:G 95 79 0.3538 0.2421 0.2911 1.60e-04
22 6jo5:K 45 61 0.4769 0.6889 0.5082 1.78e-04 8h2u:K, 6jo6:K
23 5zji:G 97 29 0.2000 0.1340 0.4483 1.84e-04
24 8wgh:G 98 29 0.1846 0.1224 0.4138 2.06e-04
25 8cmo:G 93 27 0.2308 0.1613 0.5556 2.43e-04
26 8bcv:G 94 34 0.2000 0.1383 0.3824 3.67e-04
27 3lw5:G 95 34 0.1846 0.1263 0.3529 3.85e-04 6igz:G, 2o01:G, 2wsc:G, 2wse:G, 2wsf:G, 4xk8:G, 4xk8:g
28 7wg5:AG 99 29 0.1846 0.1212 0.4138 4.46e-04 7dkz:G, 8j6z:G, 8j7a:G, 8j7b:G, 5l8r:G, 7wfd:AG, 7wfe:BG, 7wg5:BG, 6yac:G, 6yez:G, 6zoo:G, 6zxs:G
29 7a4p:G 99 22 0.2000 0.1313 0.5909 0.003 6zzx:G, 6zzy:G
30 7qco:K 65 67 0.3385 0.3385 0.3284 0.004 7qco:R, 7qco:r, 7qco:k
31 6k61:k 78 63 0.3538 0.2949 0.3651 0.005 6jeo:aK, 6jeo:bK, 6jeo:cK, 6jeo:dK, 6k61:K, 6tcl:K1, 6tcl:K2
32 5zgb:K 59 56 0.3385 0.3729 0.3929 0.006 7blz:K, 6fos:K, 5zgh:K
33 7fix:K1 79 69 0.3538 0.2911 0.3333 0.008 7fix:K2, 7fix:K3, 6tra:K, 6trc:K, 6trc:k, 6trc:9, 6trd:K, 6trd:k, 6trd:9
34 8asp:k 77 29 0.2308 0.1948 0.5172 0.010 8am5:k, 8asl:k, 6nwa:K, 6nwa:k, 6nwa:T, 7umh:K, 7umh:T, 7umh:k
35 6ijo:G 70 58 0.3077 0.2857 0.3448 0.023 7r3k:G
36 7zqc:G 80 27 0.1846 0.1500 0.4444 0.025 7bgi:G, 7blx:G, 6jo5:G, 6jo6:G
37 8dmf:A 718 31 0.1846 0.0167 0.3871 0.025 7uvp:A
38 7zq9:G 95 27 0.1846 0.1263 0.4444 0.040 7d0j:G, 7dz7:G, 7dz8:G, 8h2u:G, 7zqd:G, 7zqd:G2
39 6kmx:aK 46 28 0.2154 0.3043 0.5000 0.043 6kmx:bK, 6kmx:cK
40 7dr2:aK 69 66 0.3692 0.3478 0.3636 0.046 7dr0:K, 7dr2:cK
41 6tcl:K 60 55 0.3077 0.3333 0.3636 0.10 6tcl:KK
42 4l6v:K 80 35 0.2308 0.1875 0.4286 0.15 6hqb:K, 4l6v:k, 4l6v:0, 7o1v:K, 5oy0:K, 5oy0:k, 5oy0:8, 6uzv:K, 6uzv:k, 6uzv:8
43 5ynf:B 125 38 0.2000 0.1040 0.3421 0.27 5yn5:B, 5yn6:B, 5yn8:B, 5ynb:B, 5yni:B, 5ynj:B, 5ynm:B, 5ynn:B, 5yno:B, 5ynp:B, 5ynq:B
44 7s3d:K 75 18 0.1846 0.1600 0.6667 0.59 7s3d:T, 7s3d:k
45 6vpv:K 78 29 0.2000 0.1667 0.4483 0.61 6vpv:k, 6vpv:9
46 4uhm:A 435 38 0.2154 0.0322 0.3684 1.2 4uhn:A, 4uho:A
47 5c41:A 317 37 0.1846 0.0379 0.3243 1.6 5byf:A, 5byf:B, 5c3y:A, 5c3y:B, 5c3y:C, 5c3y:D, 5c3y:E, 5c3y:F, 5c3y:G, 5c3y:H, 5c3y:I, 5c3y:J, 5c3y:K, 5c3y:L, 5c3z:A, 5c3z:B, 5c40:A, 5c40:B, 5c41:B, 5c41:C, 5c41:D, 2fv7:A, 2fv7:B, 6wjz:A, 6wjz:B, 6wk0:A, 6wk0:B, 6wk0:C, 6wk0:D
48 4kt0:K 53 26 0.2000 0.2453 0.5000 1.6
49 6qp7:A 620 31 0.2154 0.0226 0.4516 1.6 6qp7:B
50 7pr1:A 587 34 0.2154 0.0239 0.4118 2.1 7pr1:B, 7pru:A, 7pru:B
51 8cff:B 134 29 0.1692 0.0821 0.3793 2.3 8cff:D, 8cff:F, 8cff:H, 8cgs:B, 8cgs:D, 8cgs:F, 8cgs:H, 8ch9:B, 8ch9:D, 8ch9:F, 8ch9:H, 1g8k:B, 1g8k:D, 1g8k:F, 1g8k:H
52 4b98:A 441 38 0.2000 0.0295 0.3421 4.6 4b98:B, 4b98:C, 4b98:D, 4b9b:A, 4b9b:B, 4b9b:C, 4b9b:D, 4b9b:E, 4b9b:F, 4b9b:G, 4b9b:H, 4bq0:A, 4bq0:B, 4bq0:C, 4bq0:D
53 8fun:D 370 20 0.1846 0.0324 0.6000 6.5 8ful:B, 8ful:D, 8ful:F, 8ful:H, 8fum:B, 8fum:D, 8fum:F, 8fum:H, 8fun:B, 8fuo:B, 8fuo:D, 6m2i:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218