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BioLiP
>protein
DFIGSSTNLIMVTSTTLMLFAGRFGLALQTGDPAGFTLADTLACGTVGHIIGVGVVLGLKNIGA

The query sequence (length=64) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7wfd:AK 65 65 0.9844 0.9692 0.9692 1.58e-36 7wfe:BK, 7wg5:AK, 7wg5:BK
2 8j6z:K 84 83 1.0000 0.7619 0.7711 5.63e-35 7dkz:K, 8j7b:K, 5l8r:K, 4rku:K, 6yac:K, 6yez:K, 6zoo:K, 6zxs:K
3 8bcv:K 88 82 0.8750 0.6364 0.6829 1.21e-31 7ew6:K, 7ewk:K, 7f9o:K, 7f9o:n, 2wse:K, 5zji:K
4 8j7a:K 56 62 0.8750 1.0000 0.9032 2.59e-31
5 8wgh:K 83 80 0.8594 0.6627 0.6875 4.91e-29
6 8htu:K 81 78 0.7969 0.6296 0.6538 4.71e-27 7ksq:K, 7kux:K, 6l35:K, 7xqp:K
7 4y28:K 57 59 0.7500 0.8421 0.8136 1.75e-24
8 4xk8:k 46 58 0.6719 0.9348 0.7414 2.05e-19 4xk8:K
9 6igz:K 80 78 0.6719 0.5375 0.5513 6.72e-19
10 8cmo:K 89 83 0.6406 0.4607 0.4940 1.99e-16
11 7a4p:K 86 84 0.6094 0.4535 0.4643 2.66e-15 6zzx:K, 6zzy:K
12 7dz7:K 86 84 0.6875 0.5116 0.5238 2.53e-14 7bgi:K, 7blx:K, 7d0j:K, 7dz8:K, 6ijj:K, 6ijo:K, 7r3k:K, 7zq9:K, 7zqc:K, 7zqd:K, 7zqd:K2
13 8wm6:K 69 59 0.3750 0.3478 0.4068 1.75e-09 8wmj:K, 8wmv:K, 8wmw:K
14 6kif:K 78 63 0.3750 0.3077 0.3810 3.79e-07 6kif:U, 6kif:m, 6kig:K, 6kig:U, 6kig:m
15 8wey:K 63 61 0.3906 0.3968 0.4098 4.85e-07
16 7y5e:KN 70 69 0.3594 0.3286 0.3333 4.46e-06 7y5e:K2, 7y7a:K7, 7y7a:Ko
17 6sl5:K 84 72 0.4688 0.3571 0.4167 7.41e-06
18 5zji:G 97 36 0.2344 0.1546 0.4167 2.08e-05
19 6l35:G 98 34 0.2500 0.1633 0.4706 2.44e-05 8htu:G, 7ksq:G, 7kux:G, 7xqp:G
20 7y7b:K 78 62 0.3438 0.2821 0.3548 3.21e-05 7y8a:K
21 6jo5:K 45 59 0.4844 0.6889 0.5254 7.51e-05 8h2u:K, 6jo6:K
22 6k61:k 78 63 0.3594 0.2949 0.3651 7.71e-05 6jeo:aK, 6jeo:bK, 6jeo:cK, 6jeo:dK, 6k61:K, 6tcl:K1, 6tcl:K2
23 8bcv:G 94 32 0.2188 0.1489 0.4375 1.14e-04
24 8wgh:G 98 29 0.1875 0.1224 0.4138 1.95e-04
25 8cmo:G 93 27 0.2344 0.1613 0.5556 2.20e-04
26 7yca:G 95 23 0.2188 0.1474 0.6087 2.37e-04
27 3lw5:G 95 34 0.1875 0.1263 0.3529 3.80e-04 6igz:G, 2o01:G, 2wsc:G, 2wse:G, 2wsf:G, 4xk8:G, 4xk8:g
28 7yca:K 87 79 0.4062 0.2989 0.3291 4.01e-04
29 7wg5:AG 99 29 0.1875 0.1212 0.4138 4.21e-04 7dkz:G, 8j6z:G, 8j7a:G, 8j7b:G, 5l8r:G, 7wfd:AG, 7wfe:BG, 7wg5:BG, 6yac:G, 6yez:G, 6zoo:G, 6zxs:G
30 6tcl:K 60 53 0.3125 0.3333 0.3774 0.001 6tcl:KK
31 5zgb:K 59 55 0.3750 0.4068 0.4364 0.002 7blz:K, 6fos:K, 5zgh:K
32 7a4p:G 99 22 0.2031 0.1313 0.5909 0.002 6zzx:G, 6zzy:G
33 7qco:K 65 64 0.3125 0.3077 0.3125 0.006 7qco:R, 7qco:r, 7qco:k
34 8asp:k 77 29 0.2344 0.1948 0.5172 0.008 8am5:k, 8asl:k, 6nwa:K, 6nwa:k, 6nwa:T, 7umh:K, 7umh:T, 7umh:k
35 6ijo:G 70 57 0.2812 0.2571 0.3158 0.019 7r3k:G
36 7zqc:G 80 27 0.1875 0.1500 0.4444 0.021 7bgi:G, 7blx:G, 6jo5:G, 6jo6:G
37 6kmx:aK 46 28 0.2188 0.3043 0.5000 0.029 6kmx:bK, 6kmx:cK
38 7zq9:G 95 27 0.1875 0.1263 0.4444 0.034 7d0j:G, 7dz7:G, 7dz8:G, 8h2u:G, 7zqd:G, 7zqd:G2
39 7dr2:aK 69 65 0.3438 0.3188 0.3385 0.045 7dr0:K, 7dr2:cK
40 4b7y:D 97 49 0.2344 0.1546 0.3061 0.055 4b86:D, 4b86:H, 4b86:K
41 4b7y:C 115 49 0.2344 0.1304 0.3061 0.058 4b86:C, 4b86:G, 4b86:L
42 8dmf:A 718 37 0.1875 0.0167 0.3243 0.077 7uvp:A
43 6vpv:K 78 30 0.2188 0.1795 0.4667 0.15 6vpv:k, 6vpv:9
44 4l6v:K 80 35 0.2344 0.1875 0.4286 0.15 6hqb:K, 4l6v:k, 4l6v:0, 7o1v:K, 5oy0:K, 5oy0:k, 5oy0:8, 6uzv:K, 6uzv:k, 6uzv:8
45 7fix:K1 79 30 0.2188 0.1772 0.4667 0.16 7fix:K2, 7fix:K3, 6tra:K, 6trc:K, 6trc:k, 6trc:9, 6trd:K, 6trd:k, 6trd:9
46 7s3d:K 75 18 0.1875 0.1600 0.6667 0.50 7s3d:T, 7s3d:k
47 1c9y:A 321 35 0.1719 0.0343 0.3143 0.88 1ep9:A, 1fb5:A, 1fvo:A, 1fvo:B, 1oth:A
48 9fce:B 209 28 0.1875 0.0574 0.4286 1.1 9fce:A
49 4kt0:K 53 26 0.2031 0.2453 0.5000 1.2
50 2xsx:B 435 43 0.2344 0.0345 0.3488 2.2 2xsx:A
51 7m75:K 47 38 0.2188 0.2979 0.3684 3.6 4fe1:K, 1jb0:K, 7m76:K, 7m78:K, 3pcq:K, 6pfy:K, 6pfy:T, 6pfy:g, 6pgk:T, 6pgk:K, 6pgk:g, 5zf0:K1, 5zf0:K2, 5zf0:K3, 5zf0:K4, 5zf0:K6, 5zf0:K5
52 7s5f:B 309 32 0.1719 0.0356 0.3438 5.9 7s5f:A, 7s5f:C, 7s5f:D
53 4d4z:B 290 39 0.2188 0.0483 0.3590 6.3 4d4z:A, 4d50:A, 4d50:B
54 7coy:aK 33 47 0.2188 0.4242 0.2979 7.3 7coy:bK, 7coy:cK

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218