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BioLiP
>protein
DCPSGWSSYEGHCYKPFKLYKTWDDAERFCTEQAKGGHLVSIESAGEADFVAQLVTENIQNTKSYVWIGLRVQGKEKQCS
SEWSDGSSVSYENWIEAESKTCLGLEKETGFRKWVNIYCGQQNPFVCEA

The query sequence (length=129) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1bj3:A 129 129 1.0000 1.0000 1.0000 2.93e-94 1j34:A, 1j35:A, 1x2t:A, 1x2t:C
2 1ixx:A 129 129 0.8527 0.8527 0.8527 4.90e-80 1ixx:C, 1ixx:E
3 1iod:A 129 129 0.7364 0.7364 0.7364 6.91e-68 1wt9:A, 1y17:A
4 2e3x:B 129 129 0.5194 0.5194 0.5194 2.25e-42
5 1bj3:B 123 128 0.4496 0.4715 0.4531 3.38e-30 1ixx:B, 1ixx:D, 1ixx:F, 1j34:B, 1j35:B, 1x2t:B, 1x2t:D
6 1iod:B 123 128 0.4419 0.4634 0.4453 3.37e-29 1wt9:B, 1y17:B
7 1fvu:B 121 128 0.4574 0.4876 0.4609 2.11e-27 1fvu:D
8 1ukm:B 124 127 0.3643 0.3790 0.3701 8.73e-22
9 5f2q:B 135 134 0.3721 0.3556 0.3582 1.34e-20 5f2q:A, 5f2q:C, 5f2q:D, 5f2q:E, 5f2q:F, 5f2q:G, 5f2q:H, 5f2q:I, 5f2q:J, 1jzn:A, 1jzn:B, 1jzn:C, 1jzn:D, 1jzn:E, 1muq:B, 1muq:A, 1muq:C, 1muq:D, 1muq:E
10 4mth:A 139 135 0.3876 0.3597 0.3704 2.20e-20 1uv0:A
11 1qdd:A 144 132 0.3798 0.3403 0.3712 1.03e-18
12 1tdq:B 126 135 0.3566 0.3651 0.3407 6.48e-17
13 3alu:A 157 148 0.2946 0.2420 0.2568 1.23e-12 3als:A, 3als:B, 3als:C, 3als:D, 3alt:A, 3alt:B, 3alt:C, 3alt:D, 3alu:B, 3alu:C, 3alu:D
14 5e4k:A 424 135 0.3023 0.0920 0.2889 2.73e-12
15 5e4k:A 424 135 0.2868 0.0873 0.2741 0.002
16 6a7s:B 138 134 0.3023 0.2826 0.2910 1.23e-10 6a7t:B, 6m5m:B
17 6a7t:A 137 94 0.2403 0.2263 0.3298 2.42e-10 6m5m:A
18 2py2:A 127 132 0.2946 0.2992 0.2879 3.40e-10 2py2:B, 2py2:C, 2py2:D, 2py2:E, 2py2:F
19 1egg:B 144 141 0.3643 0.3264 0.3333 1.11e-09 1egg:A, 1egi:A, 1egi:B, 7jub:A, 7juc:A, 7jud:A, 7jud:B, 7jue:A, 7juf:A, 7juf:B, 7jug:A, 7juh:A, 7l61:A, 7l62:A, 7l63:A, 7l64:A, 7l65:A, 7l66:A, 7l67:A, 7l68:A, 7l68:B
20 5xts:A 460 135 0.3178 0.0891 0.3037 6.40e-09 5xtw:A, 5xtw:C, 5xtw:D, 5xtw:E, 5xtw:F, 5xtw:H
21 5xts:A 460 112 0.2403 0.0674 0.2768 6.73e-04 5xtw:A, 5xtw:C, 5xtw:D, 5xtw:E, 5xtw:F, 5xtw:H
22 3whd:C 148 77 0.1938 0.1689 0.3247 1.12e-08 3whd:A
23 4wqq:A 141 137 0.2946 0.2695 0.2774 1.60e-08 1wmy:A, 1wmy:B, 1wmz:A, 1wmz:B, 1wmz:C, 1wmz:D, 4wqq:B, 4wqq:C, 4wqq:D
24 6jk4:A 126 133 0.2868 0.2937 0.2782 2.36e-08
25 4gko:L 136 134 0.3256 0.3088 0.3134 2.72e-08 4g9a:A, 4g9a:B, 4g9a:C, 4g9a:D, 4gko:G, 4gko:H, 4gko:I, 4gko:J, 4gko:K, 2h2t:B
26 6jjj:A 151 137 0.3101 0.2649 0.2920 5.38e-08 6jjj:B, 6jjj:C, 6jjj:D, 6jjj:E, 6jjj:F
27 2ox9:C 131 138 0.3178 0.3130 0.2971 7.20e-08 2ox9:A, 2ox9:B, 2ox9:D
28 8urf:A 128 141 0.3101 0.3125 0.2837 1.36e-07
29 2ox8:A 129 137 0.2946 0.2946 0.2774 3.70e-07 2ox8:B, 2ox8:C, 2ox8:D
30 3vyk:A 128 135 0.3023 0.3047 0.2889 1.41e-06
31 5e4l:A 428 115 0.2558 0.0771 0.2870 1.97e-06
32 5e4l:A 428 135 0.2868 0.0864 0.2741 0.002
33 6py1:A 130 138 0.2868 0.2846 0.2681 2.39e-06 6puv:A, 6w12:A, 6xiy:A
34 2vuv:A 129 129 0.2636 0.2636 0.2636 7.56e-06 2vuz:A
35 6ghv:D 133 90 0.2171 0.2105 0.3111 1.86e-05 6ghv:A, 6ghv:B, 6ghv:C, 6ghv:E, 6ghv:F, 2it5:A, 2it6:A, 1k9i:A, 1k9i:C, 1k9i:D, 1k9i:E, 1k9i:H, 1k9i:B, 1k9i:F, 1k9i:G, 1k9i:I, 1k9i:J, 7nl6:A, 7nl7:A, 1sl4:A, 1sl5:A, 2xr5:A, 2xr6:A
36 3kqg:A 169 133 0.2868 0.2189 0.2782 2.26e-05 4ak8:A, 4ak8:B, 4ak8:C, 4ak8:D, 3c22:A, 3c22:B, 3c22:C, 3c22:D, 5g6u:A, 5g6u:B, 5g6u:D, 5g6u:C, 3kqg:B, 3kqg:C, 3kqg:D, 3kqg:E, 3kqg:F, 4n32:A, 4n32:B, 4n32:C, 4n32:D, 4n33:A, 4n33:B, 4n33:C, 4n33:D, 4n34:A, 4n34:B, 4n34:C, 4n34:D, 4n35:A, 4n35:B, 4n35:C, 4n35:D, 4n36:A, 4n36:B, 4n36:C, 4n36:D, 4n37:A, 4n37:B, 4n37:C, 4n37:D, 4n38:A, 4n38:B, 4n38:C, 4n38:D, 3p5d:A, 3p5d:B, 3p5d:C, 3p5d:D, 3p5e:A, 3p5e:B, 3p5e:C, 3p5e:D, 3p5f:B, 3p5f:C, 3p5f:A, 3p5f:D, 3p5g:A, 3p5g:B, 3p5g:C, 3p5g:D, 3p5h:B, 3p5h:D, 3p5h:A, 3p5h:C, 3p5i:A, 3p5i:B, 3p5i:C, 3p5i:D, 3p7f:A, 3p7f:B, 3p7f:C, 3p7f:D, 3p7g:A, 3p7g:B, 3p7g:C, 3p7g:D, 3p7h:A, 3p7h:B, 3p7h:C, 3p7h:D, 7ytq:A, 7ytq:B, 7ytq:C, 7ytq:D
37 1sl6:A 168 89 0.2171 0.1667 0.3146 2.36e-05 1k9j:A, 1sl6:B, 1sl6:C, 1sl6:D, 1sl6:E, 1sl6:F, 1xph:A
38 6pwr:A 129 134 0.3023 0.3023 0.2910 2.63e-05 6pws:A, 6pwt:A
39 3vpp:B 122 127 0.2791 0.2951 0.2835 4.59e-05 3vpp:A
40 1htn:A 156 126 0.2481 0.2051 0.2540 4.91e-05 1tn3:A
41 5vyb:A 143 58 0.1473 0.1329 0.3276 9.15e-05
42 8ea6:B 124 89 0.2248 0.2339 0.3258 1.00e-04 8ea5:A, 8ea5:B, 8ea6:A, 8ea7:A, 8ea7:B, 8ea8:B, 8ea8:A, 8ea9:B, 8ea9:A, 8eaa:B, 8eaa:A, 8eab:A, 8eab:B, 8se5:B, 8se5:A, 8se6:A, 8se6:B
43 3wsr:A 120 127 0.2481 0.2667 0.2520 1.43e-04 3wsr:B
44 4c9f:D 134 89 0.2248 0.2164 0.3258 1.73e-04 4c9f:A, 4c9f:B, 4c9f:C, 4caj:A, 4caj:B, 4caj:C, 4caj:D, 3zhg:A, 3zhg:B, 3zhg:C, 3zhg:D
45 5b1w:A 130 69 0.1705 0.1692 0.3188 2.02e-04 5b1w:B, 5b1w:C, 5b1w:D, 5b1x:A, 5b1x:B, 5b1x:C, 5b1x:D
46 4zes:A 147 77 0.1705 0.1497 0.2857 2.04e-04 4zes:B, 4zet:A, 4zet:B
47 5k8y:A 136 133 0.2791 0.2647 0.2707 4.37e-04 5k8y:B, 5m62:A, 5m62:B
48 3t3a:A 122 92 0.1783 0.1885 0.2500 5.82e-04 3t3a:B
49 3cdg:J 123 89 0.1783 0.1870 0.2584 6.14e-04 3cdg:E, 3cii:G, 3cii:I
50 6lfj:A 133 56 0.1395 0.1353 0.3214 7.22e-04 6kzr:A, 6kzr:B, 6lfj:B, 6lkr:A, 6lkr:B
51 2brs:B 115 104 0.2016 0.2261 0.2500 7.27e-04
52 2ric:C 158 132 0.2791 0.2278 0.2727 0.002 1b08:A, 1b08:B, 1b08:C, 3dbz:A, 3dbz:B, 3dbz:C, 4e52:B, 4e52:C, 4e52:A, 3g81:A, 3g81:B, 3g81:C, 3g83:A, 3g83:B, 3g83:C, 3g84:A, 3g84:B, 3g84:C, 2ggu:A, 2ggu:B, 2ggu:C, 2ggx:A, 2ggx:B, 2ggx:C, 3ikn:A, 3ikn:B, 3ikn:C, 3ikp:A, 3ikp:B, 3ikp:C, 3ikq:A, 3ikq:B, 3ikq:C, 3ikr:A, 3ikr:B, 3ikr:C, 4m17:A, 4m17:B, 4m17:C, 4m17:D, 4m17:E, 4m17:F, 4m17:G, 4m17:H, 4m17:I, 4m17:J, 4m17:K, 4m17:L, 4m18:A, 4m18:E, 4m18:B, 4m18:C, 4m18:D, 4m18:L, 4m18:F, 4m18:G, 4m18:H, 4m18:I, 4m18:J, 4m18:K, 2orj:A, 2orj:B, 2orj:C, 2ork:A, 2ork:B, 2ork:C, 2os9:A, 2os9:B, 2os9:C, 5oxr:B, 5oxr:C, 5oxr:A, 5oxs:A, 5oxs:B, 5oxs:C, 1pw9:A, 1pw9:B, 1pw9:C, 1pwb:A, 1pwb:B, 1pwb:C, 2ria:A, 2ria:B, 2ria:C, 2rib:A, 2rib:B, 2rib:C, 2ric:B, 2ric:A, 2rid:A, 2rid:B, 2rid:C, 2rie:A, 2rie:B, 2rie:C
53 5jq1:A 130 138 0.2636 0.2615 0.2464 0.002 1dv8:A, 5jpv:A, 5jpv:B, 5jq1:B, 8ts0:A, 6yau:A
54 5e4l:B 386 135 0.2868 0.0959 0.2741 0.002
55 5e4l:B 386 55 0.1318 0.0440 0.3091 2.2
56 3wh2:A 132 137 0.2791 0.2727 0.2628 0.008 3wh3:A
57 8umo:K 113 74 0.1705 0.1947 0.2973 0.015
58 3j82:A 131 87 0.1860 0.1832 0.2759 0.018
59 1g1q:A 160 54 0.1163 0.0938 0.2778 0.10 1g1q:B, 1g1q:C, 1g1q:D, 1g1r:A, 1g1r:B, 1g1r:D, 1g1r:C, 1g1s:B, 1g1s:A
60 3cfw:A 156 53 0.1240 0.1026 0.3019 0.15 5vc1:A
61 3pak:A 145 80 0.1628 0.1448 0.2625 0.31 5ffr:A, 5ffs:A, 5fft:A, 3paq:A, 3par:A, 3pbf:A, 1r13:A, 1r14:A, 4wr9:A, 4wrc:A, 4wre:A, 4wrf:A, 4wuw:A, 4wux:A
62 1kcc:A 333 74 0.1705 0.0661 0.2973 0.33 1kcd:A
63 6rxt:UR 447 54 0.1163 0.0336 0.2778 2.5 5oql:N, 6rxu:UR, 6rxv:UR, 6rxy:UR, 6rxz:UR
64 5jmu:A 220 29 0.0930 0.0545 0.4138 4.4
65 7odu:A 129 90 0.1550 0.1550 0.2222 6.1

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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