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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
CYLSETANLGKLICIPMALRAAMELNVFQLISKFGTDAKVSASEIASKMPNAKNNPEAAMYLDRILRLLGASSILSVSTT
AASINRGGDDVVVHEKLYGLTNSSCCLVPRQEDGVSLVEELLFTSDKVVVDSFFKLKCVVEEKDSVPFEVAHGAKIFEYA
ATEPRMNQVFNDGMAVFSIVVFEAVFRVYDGFLDMKELLDVGGGIGTSVSKIVAKYPLIRGVNFDLPHVISVAPQYPGVE
HVAGDMFEEVPKGQNMLLKWVLHAWGDERCVKLLKNCWNSLPVGGKVLIIEFVLPNELGNNAESFNALIPDLLLMALNPG
GKERTISEYDDLGKAAGFIKTIPIPISNGLHVIEFHK

The query sequence (length=357) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6i6m:B 357 357 1.0000 1.0000 1.0000 0.0 6i5z:A, 6i5z:B, 6i5z:D, 6i6k:A, 6i6k:B, 6i6l:A, 6i6l:B, 6i6m:A, 6i6n:A, 6i6n:B
2 6nej:B 346 356 0.5826 0.6012 0.5843 3.25e-145 6neg:A, 6neg:B, 6neh:A, 6neh:B, 6nej:A
3 1kyw:C 361 324 0.4090 0.4044 0.4506 2.77e-95 1kyw:F, 1kyz:A, 1kyz:C, 1kyz:E
4 6i71:A 353 343 0.4146 0.4193 0.4315 2.37e-94 6i71:B, 6i72:A, 6i72:B, 6i73:A, 6i73:B, 6yjw:A, 6yjw:B
5 7v6l:B 347 343 0.3950 0.4063 0.4111 1.36e-92 7v6j:A, 7v6j:B, 7v6l:A
6 3p9i:A 357 343 0.3978 0.3978 0.4140 3.90e-90 3p9c:A, 3p9i:B, 3p9i:C, 3p9i:D, 3p9k:A, 3p9k:B, 3p9k:C, 3p9k:D
7 5cvj:D 361 351 0.4118 0.4072 0.4188 2.70e-89 5cvj:A, 5cvj:B, 5cvj:C, 5cvu:A, 5cvu:B, 5cvu:C, 5cvu:D, 5cvv:A, 5cvv:B, 3reo:A, 3reo:B, 3reo:C, 3reo:D, 3tky:A, 3tky:B, 3tky:C, 3tky:D
8 4pgh:D 358 345 0.3922 0.3911 0.4058 2.94e-83 4pgh:A, 4pgh:B, 4pgh:C
9 5xoh:A 348 332 0.3641 0.3736 0.3916 2.10e-80
10 1fp1:D 340 345 0.3697 0.3882 0.3826 1.15e-68 1fpq:A
11 7waq:D 365 332 0.3109 0.3041 0.3343 1.51e-56 7vb8:B, 7vb8:A, 7waq:B, 7waq:A, 7waq:C, 7war:B, 7war:A, 7was:A, 7was:B
12 5icc:A 352 343 0.2969 0.3011 0.3090 1.39e-39 5ice:A, 5icf:A
13 6cig:A 349 346 0.2717 0.2779 0.2803 8.23e-33 1fp2:A
14 6c5b:A 332 215 0.2213 0.2380 0.3674 1.33e-32 6c5b:B
15 2qyo:A 353 343 0.2745 0.2776 0.2857 3.79e-32 2qyo:B
16 4evi:A 360 352 0.2969 0.2944 0.3011 8.57e-31 4e70:A, 4e70:B, 4evi:B
17 1zg3:A 358 350 0.2941 0.2933 0.3000 2.03e-24 1zga:A, 1zgj:A, 1zhf:A
18 8bic:B 323 222 0.1849 0.2043 0.2973 2.04e-21 8bic:A
19 8bie:A 318 200 0.1569 0.1761 0.2800 1.34e-19 8bie:B, 8bij:A, 8bij:B
20 3lst:A 333 191 0.1709 0.1832 0.3194 1.34e-19 3lst:B
21 8bif:A 318 204 0.1569 0.1761 0.2745 5.26e-19 8bif:B, 8bif:C, 8bif:D
22 8bgt:A 319 204 0.1625 0.1818 0.2843 4.50e-18 8bgt:B, 8bgx:A, 8bgx:B, 8bgx:C, 8bgx:D, 8bgy:A, 8bgy:B, 8bgy:C, 8bgy:D, 8bgz:A, 8bgz:B, 8bgz:C, 8bgz:D, 8bh0:A, 8bh0:B, 8bh0:C, 8bh0:D, 8bh0:E, 8bh0:F, 8bh0:G, 8bh0:H, 8bib:A, 8bib:B, 8bib:C, 8bib:D, 8bid:A, 8bid:B, 8bid:C, 8bid:D, 8bih:A, 8bih:B, 8bih:C, 8bih:D, 8bih:E, 8bih:F, 8bih:G, 8bih:H, 8bih:I, 8bih:J, 8bih:K, 8bih:L
23 8bir:A 321 205 0.1569 0.1745 0.2732 8.78e-18 8big:A, 8big:B, 8big:C, 8big:D, 8big:E, 8big:F, 8big:G, 8big:H, 8bii:A, 8bii:B, 8bii:C, 8bii:D, 8bii:E, 8bii:F, 8bii:G, 8bii:H, 8bir:B
24 3gwz:A 339 277 0.1765 0.1858 0.2274 3.67e-15 3gwz:D, 3gwz:C, 3gwz:B, 3gxo:A, 3gxo:D, 3gxo:C, 3gxo:B
25 6clx:B 342 198 0.1513 0.1579 0.2727 8.25e-14 6clx:A
26 5i2h:A 335 166 0.1457 0.1552 0.3133 1.02e-13 5i2h:B
27 1tw2:B 350 211 0.1765 0.1800 0.2986 1.57e-13 5eeg:A, 5eeg:B, 5eeh:A, 5eeh:B, 5eeh:C, 5jr3:A, 5jr3:B, 5jr3:C, 7owb:A, 7oy1:A, 7oy1:B, 7pga:A, 7pga:B, 7pga:C, 7pga:D, 7pgj:A, 7phd:A, 7phd:B, 7phe:A, 7phe:B, 7phf:A, 7phf:D, 7phf:C, 1tw2:A, 1tw3:A, 1tw3:B, 4wxh:A, 4wxh:B
28 4a6d:A 345 148 0.1261 0.1304 0.3041 3.44e-13 4a6e:A
29 1qzz:A 340 195 0.1457 0.1529 0.2667 4.20e-11 1r00:A, 1xds:A, 1xds:B, 1xdu:A
30 7clf:A 335 178 0.1429 0.1522 0.2865 4.72e-10 7clf:B
31 8tjj:C 330 190 0.1317 0.1424 0.2474 1.20e-08 8tjj:A, 8tjj:B, 8tjj:D, 8tjk:A, 8tjk:B
32 7y3h:A 396 229 0.1877 0.1692 0.2926 2.66e-08 8gx4:A, 8gzi:A
33 3i58:A 328 107 0.1008 0.1098 0.3364 6.05e-08 3i53:A, 3i53:B, 3i58:B, 3i5u:A, 3i5u:B, 3i64:A, 3i64:B
34 8pha:A 450 157 0.1204 0.0956 0.2739 3.88e-07 8pha:B
35 7pg7:D 329 193 0.1317 0.1429 0.2435 6.14e-07
36 8xte:A 395 233 0.1709 0.1544 0.2618 7.21e-06 8xte:B, 8xte:C, 8xte:D, 8xte:E, 8xte:F, 8xtf:A, 8xtg:A, 8xtg:B, 8xtg:C, 8xtg:D, 8xtg:E, 8xtg:F
37 4u1q:A 341 144 0.1008 0.1056 0.2500 1.92e-05 4u1q:B, 4u1q:C, 4u1q:D, 4x3q:A, 4x3q:B, 4x3q:C, 4x3q:D
38 7wuy:A 393 152 0.1261 0.1145 0.2961 2.72e-05 7wuy:B, 7wvs:A, 7wvs:B, 7ww0:A, 7ww0:B
39 7wdq:A 336 109 0.0980 0.1042 0.3211 2.97e-05 7wdq:B, 7wdq:C, 7wdw:A, 7wdw:B, 7wdw:C, 7wdw:D
40 6inw:B 390 148 0.1036 0.0949 0.2500 3.12e-05 6inw:A, 6iv7:A, 6iv7:B, 6ix3:A, 6ix3:B, 6ix5:A, 6ix5:B, 6ix7:A, 6ix7:B, 6ix8:A, 6ix8:B, 6ix9:A, 6ix9:B, 6j1o:A, 6j1o:B, 6j24:B, 6j24:A, 6j46:A, 6j46:B, 5zzd:A, 5zzd:B
41 1x1a:A 337 108 0.0700 0.0742 0.2315 7.06e-05 1x1b:A, 1x1c:A, 1x1d:A
42 8har:A 357 159 0.1176 0.1176 0.2642 3.64e-04 8har:B
43 7wh9:A 476 95 0.0840 0.0630 0.3158 7.30e-04 7wh9:B, 7wh9:C
44 7phf:B 270 110 0.0784 0.1037 0.2545 0.003
45 6uk5:A 240 54 0.0532 0.0792 0.3519 0.067 6uk5:B
46 6fv5:B 382 191 0.1345 0.1257 0.2513 0.090 7b2i:A, 6fv5:A, 7ov9:A, 7ovo:A, 7ovs:A, 7owz:A
47 8omr:B 382 81 0.0756 0.0707 0.3333 0.12 7nq4:B
48 6dcb:A 225 103 0.0700 0.1111 0.2427 2.4 6dcc:A, 5una:C, 5una:A, 5una:B, 5una:D, 5una:E, 5una:F
49 6ezl:A 392 58 0.0448 0.0408 0.2759 2.9 6ezl:B
50 1l1e:A 272 163 0.0980 0.1287 0.2147 3.0 1l1e:B
51 1lml:A 465 88 0.0644 0.0495 0.2614 3.3
52 8erb:K 429 64 0.0560 0.0466 0.3125 3.4 8erb:A, 8erb:C, 8erb:B, 8erb:D, 8erb:G, 8erb:H, 8erb:F, 8erb:P, 8erb:I, 8erb:J, 8erb:M, 8erb:E, 8erb:Q, 8erb:N, 8erb:L, 8erj:A, 8erj:B, 8erj:C, 8erj:D, 8erj:E, 8erj:F, 8erj:H, 8erj:G
53 8j6n:A 390 76 0.0616 0.0564 0.2895 4.1 8j6n:D, 8j6n:B, 8j6n:C, 8j6n:E, 8j6n:H, 8j6n:J, 8j6n:K, 8j6n:F, 8j6n:G, 8j6n:I, 8j6n:L
54 7kb1:A 428 271 0.1597 0.1332 0.2103 4.9 7kb1:B, 7kb1:C, 7kb1:D
55 5gm2:K 267 147 0.0952 0.1273 0.2313 4.9
56 1hwp:A 252 90 0.0532 0.0754 0.2111 6.4
57 7ux7:A 378 162 0.1064 0.1005 0.2346 7.0 7ux6:A, 7ux6:B, 7ux7:B, 7ux8:A, 7ux8:B
58 1hqm:D 1175 117 0.0924 0.0281 0.2821 7.1 1i6v:D
59 1gnx:A 447 63 0.0476 0.0380 0.2698 7.8 1gnx:B, 1gon:A
60 6hp2:A 297 37 0.0364 0.0438 0.3514 8.3
61 7slp:A 239 35 0.0364 0.0544 0.3714 8.4 7slq:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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