BioLiP

>protein
CPAERSGHVAVSDGRHMFVWGGYKSNDFYLPREELWIYNMETGRWKKINTEGDVPPSMSGSCAVCVDRVLYLFGGHHSRG
NTNKFYMLDSRVLQWERIDCQGIPPSSKDKLGVWVYKNKLIFFGGYGYLPEDVLGTFEFDETSFWNSSHPRGWNDHVHIL
DTETFTWSQPITTGKAPSPRAAHACATVGNRGFVFGGRYRDARMNDLHYLNLDTWEWNELIPQGICPVGRSWHSLTPVSS
DHLFLFGGFTTDKQPLSDAWTYCISKNEWIQFNHPYTEKPRLWHTACASDEGEVIVFGGCANNLLVHHRAAHSNEILIFS
V

The query sequence (length=321) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	8ebl:A	335	332	1.0000	0.9582	0.9669	0.0	6do3:A, 6do3:B, 6do4:B, 6do4:A, 6do5:B, 6do5:A, 8ebl:B, 8ebm:A, 8ebm:B, 8pif:A, 8pif:B, 8sge:A, 8sge:B, 8sgf:B, 8sgf:A, 8uxs:A, 8uxs:B
2	8bx8:C	3947	348	0.2835	0.0231	0.2615	1.15e-21	7k58:C, 7k5b:C, 7kek:C
3	8bx8:C	3947	256	0.2056	0.0167	0.2578	4.18e-16	7k58:C, 7k5b:C, 7kek:C
4	8bx8:C	3947	95	0.0903	0.0073	0.3053	1.40e-04	7k58:C, 7k5b:C, 7kek:C
5	2zwa:B	683	132	0.1153	0.0542	0.2803	1.65e-07	2zw9:A, 2zw9:B, 2zwa:A
6	6gy5:A	285	258	0.1838	0.2070	0.2287	6.63e-04
7	2rpz:A	192	51	0.0467	0.0781	0.2941	1.5
8	4w88:B	340	105	0.0903	0.0853	0.2762	2.4	4w86:A, 4w86:B, 4w87:A, 4w87:B, 4w88:A, 4w89:A, 4w89:B
9	6s47:Bi	952	62	0.0498	0.0168	0.2581	2.7
10	6apl:C	306	51	0.0530	0.0556	0.3333	4.4	6apl:A, 6apl:B, 6apl:D, 6apl:E, 6apl:F
11	2r66:A	456	121	0.0903	0.0636	0.2397	7.5	2r68:A
12	6sg9:F4	541	25	0.0312	0.0185	0.4000	7.5	6sgb:F4
13	4uur:A	124	60	0.0530	0.1371	0.2833	8.3	4uur:B
14	8d9m:A	258	40	0.0436	0.0543	0.3500	8.5	7lq5:A, 7lq5:B, 7lq5:C

[Back]