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BioLiP
>protein
CLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWFDQGTRDVIGLRIAGGAILWATPDHKVLTEYG
WRAAGELRKGDRVAQPRRFDGFMLAEELRYSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHN

The query sequence (length=144) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2imz:A 144 144 1.0000 1.0000 1.0000 1.62e-102 5i0a:A, 3ifj:A, 3ifj:B, 3igd:A, 2imz:B, 5k08:A
2 5ol7:A 143 59 0.1250 0.1259 0.3051 9.26e-06
3 1zde:A 160 59 0.1042 0.0938 0.2542 0.007
4 4gdp:B 502 50 0.1250 0.0359 0.3600 2.7 3bi2:A, 3bi2:B, 3bi4:A, 3bi4:B, 3bi5:A, 3bi5:B, 3bnm:B, 3bnm:A, 3bnu:B, 3bnu:A, 3cn8:B, 3cn8:A, 3cnd:B, 3cnd:A, 3cnp:B, 3cnp:A, 3cns:A, 3cns:B, 3cnt:B, 3cnt:A, 4ech:A, 4ech:B, 4gdp:A, 4gdp:C, 4gdp:D, 1rsg:B, 1xpq:A, 1xpq:B, 1xpq:C, 1xpq:D, 1yy5:A, 1yy5:B, 1z6l:A, 1z6l:B
5 7zol:B 1702 45 0.1042 0.0088 0.3333 5.5 7zoq:B
6 6y75:A 153 57 0.0972 0.0915 0.2456 5.6 6y75:B, 6y75:C, 6y75:D
7 8r2c:A 169 43 0.0972 0.0828 0.3256 5.7
8 3h0g:M 1476 66 0.1319 0.0129 0.2879 5.7
9 6z5s:W 94 29 0.0833 0.1277 0.4138 6.5
10 6iv3:A 274 46 0.1042 0.0547 0.3261 7.9 6iv0:A, 6iv0:B, 6iv0:C, 6iv0:D, 6iv0:E, 6iv1:A, 6iv1:B, 6iv1:C, 6iv1:D, 6iv1:E, 6iv2:A, 6iv2:B, 6iv2:C, 6iv2:D, 6iv2:E, 6iv3:B, 6iv3:C, 6iv3:D, 6iv3:E, 6iv4:A, 6iv4:B, 6iv4:C, 6iv4:D, 6iv4:E, 6ivj:A, 6ivj:B, 6ivj:C, 6ivj:D, 6ivj:E, 6ivk:A, 6ivk:B, 6ivk:C, 6ivk:D, 6ivk:E, 6ivl:A, 6ivl:B, 6ivl:C, 6ivl:D, 6ivl:E, 6ivm:A, 6ivm:B, 6ivm:C, 6ivm:D, 6ivm:E, 6ivn:A, 6ivn:B, 6ivn:C, 6ivn:D, 6ivn:E, 6ivo:A, 6ivo:B, 6ivo:C, 6ivo:D, 6ivo:E, 6ivp:A, 6ivp:B, 6ivp:C, 6ivp:D, 6ivp:E, 6ivq:A, 6ivq:B, 6ivq:C, 6ivq:D, 6ivq:E, 6ivr:A, 6ivr:B, 6ivr:C, 6ivr:D, 6ivr:E, 6ivw:A, 6ivw:B, 6ivw:C, 6ivw:D, 6ivw:E, 6jlf:A, 6jlf:B, 6jlf:C, 6jlf:D, 6jlf:E, 4wd7:A, 4wd7:B, 4wd7:C, 4wd7:D, 4wd7:E, 4wd8:A, 4wd8:B, 4wd8:C, 4wd8:D, 4wd8:E, 5x87:A, 5x87:B, 5x87:C, 5x87:D, 5x87:E

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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