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BioLiP
>protein
CKPPYSFSCLIFMAIEDSPTKRLPVKDIYNWILEHFPYFANAPTGWKNSVRHNLSLNKCFKKVDKKGSLWCIDPEYRQNL
IQALKKTPYHP

The query sequence (length=91) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6ncm:A 91 91 1.0000 1.0000 1.0000 2.31e-65 6nce:A, 6ncm:B
2 6el8:A 89 87 0.5604 0.5730 0.5862 6.64e-32 6el8:D
3 7cby:C 100 79 0.4505 0.4100 0.5190 1.05e-24
4 7vov:A 93 79 0.4286 0.4194 0.4937 1.12e-23 7vou:C, 7vov:B
5 6ako:C 97 80 0.4176 0.3918 0.4750 1.22e-23 6akp:C, 6lbm:C, 6o3t:A, 6o3t:B
6 2c6y:A 98 93 0.4835 0.4490 0.4731 9.07e-23 2c6y:B
7 8bzm:E 95 93 0.4505 0.4316 0.4409 3.07e-22 8bzm:I, 8bzm:A, 8bzm:J
8 7yze:A 87 81 0.4066 0.4253 0.4568 1.26e-21 5x07:F, 5x07:C, 5x07:L, 5x07:I, 7yzf:C
9 8vfy:O 102 81 0.4066 0.3627 0.4568 1.27e-21 8vfz:O, 8vfz:P, 8vg1:O, 8vg2:O, 7vox:A, 7vox:C, 7vox:H, 7vox:B, 1vtn:C
10 3qrf:G 82 79 0.3736 0.4146 0.4304 2.30e-21 3qrf:F, 3qrf:H, 3qrf:I, 4wk8:F, 4wk8:G
11 7tdw:A 90 74 0.3516 0.3556 0.4324 4.36e-21 8sro:A, 8sro:C, 8sro:D, 8sro:B, 8srp:J, 8srp:G, 8srp:E, 8srp:D, 8srp:B, 8srp:A, 8srp:F, 8srp:C, 7tdx:A
12 2a07:J 83 80 0.3736 0.4096 0.4250 7.69e-21 2a07:K, 2a07:F, 2a07:G, 2a07:H, 2a07:I, 2as5:F, 2as5:G
13 3g73:B 95 83 0.4286 0.4105 0.4699 1.53e-20 7fj2:A, 7fj2:B, 7fj2:E, 7fj2:F, 3g73:A
14 2hdc:A 97 81 0.4066 0.3814 0.4568 5.74e-19
15 7yzb:A 125 79 0.3516 0.2560 0.4051 7.24e-18
16 7yzg:A 121 79 0.3736 0.2810 0.4304 1.63e-17
17 2uzk:A 97 79 0.3956 0.3711 0.4557 2.34e-17 2uzk:C
18 3co6:C 91 79 0.3846 0.3846 0.4430 3.17e-17 3co7:C, 3co7:F, 3coa:C, 3coa:F, 5dui:A, 5dui:B, 6lbi:C, 6lbi:D, 6lbi:G, 6lbi:H, 6lbi:K, 6lbi:L, 4lg0:A
19 7yza:A 122 79 0.3736 0.2787 0.4304 3.30e-16 7yz7:A, 7yzc:A, 7yzd:A
20 3l2c:A 85 77 0.3736 0.4000 0.4416 1.50e-15
21 7bez:A 214 35 0.1319 0.0561 0.3429 0.24 7bez:B, 7bf0:A, 7bf0:B, 3uk8:A, 3uk8:B
22 2nvo:A 496 60 0.2088 0.0383 0.3167 2.3
23 3bg6:A 577 21 0.1209 0.0191 0.5238 2.5 3bg6:B, 3bg6:C, 3bg6:D, 3bg6:E, 3bg6:F, 3bg6:G, 3bg6:H, 3bg7:A, 3bg7:B, 3bg7:C, 3bg7:D, 3bg7:E, 3bg7:F, 3bg7:G, 3bg7:H, 3bly:A, 2f5v:A, 2f6c:A, 3fdy:A, 2igk:A, 2igk:B, 2igk:C, 2igk:D, 2igk:E, 2igk:F, 2igk:G, 2igk:H, 2igm:A, 2igm:B, 2igm:D, 2igm:C, 2igm:E, 2igm:F, 2igm:G, 2igm:H, 2ign:A, 2ign:B, 2ign:D, 2ign:C, 2ign:E, 2ign:F, 2ign:H, 2ign:G, 2igo:A, 2igo:B, 2igo:D, 2igo:C, 2igo:E, 2igo:F, 2igo:H, 2igo:G, 3k4b:A, 3k4c:A, 3k4c:B, 3k4c:C, 3k4c:D, 3k4j:A, 3k4k:A, 3k4l:A, 3k4l:B, 3k4m:A, 3k4m:B, 3k4m:C, 3k4m:D, 3k4m:E, 3k4m:F, 3k4m:G, 3k4m:H, 3k4n:A, 3k4n:B, 3lsh:A, 3lsh:B, 3lsh:C, 3lsh:D, 3lsi:A, 3lsi:B, 3lsk:A, 3lsk:B, 3lsk:C, 3lsk:D, 3lsm:A, 3lsm:B, 4moe:A, 4moe:B, 4moe:C, 4moe:D, 4mof:A, 4mog:A, 4moh:A, 4moi:A, 4moi:B, 4moj:A, 4moj:B, 4moj:C, 4moj:D, 4mok:A, 4mok:B, 4mok:C, 4mok:D, 4mol:A, 4mol:B, 4mol:C, 4mol:D, 4mom:A, 4mom:B, 4mom:C, 4mom:D, 4moo:A, 4mop:A, 4mop:B, 4mop:C, 4mop:D, 4moq:A, 4moq:B, 4mor:A, 4mor:B, 4mor:C, 4mor:D, 4mos:A, 3pl8:A, 1tt0:A, 1tt0:B, 1tt0:C, 1tt0:D, 1tzl:A, 1tzl:B, 1tzl:C, 1tzl:D, 1tzl:E, 1tzl:F, 1tzl:G, 1tzl:H
24 7aik:A 321 27 0.1099 0.0312 0.3704 5.1 7ail:A, 7q39:AAA, 7q3c:AAA
25 3hl3:A 246 58 0.1648 0.0610 0.2586 5.6 4ecm:A
26 7xc2:C 858 38 0.1429 0.0152 0.3421 6.6 7xc2:A, 7xc2:E, 7xc2:G, 7xc2:I, 7xe0:A, 7xe0:C, 7xe0:E, 7xe0:G, 7xe0:I, 7xx2:A, 7xx2:C, 7xx2:E, 7xx2:G, 7xx2:I
27 4nea:A 505 20 0.1209 0.0218 0.5500 7.8 5dib:A, 5dib:B, 5dib:C, 5dib:D, 5eyu:A, 5eyu:B, 5eyu:C, 5eyu:D, 5ez4:A, 5ez4:B, 5ez4:C, 5ez4:D, 4mpy:A, 4mpy:B, 4mpy:C, 4mpy:D, 4mpy:E, 4mpy:F, 4mpy:G, 4mpy:H, 4nea:B, 4nea:C, 4nea:D, 4qn2:A, 4qn2:B, 4qn2:C, 4qn2:D, 4qn2:E, 4qn2:F, 4qn2:G, 4qn2:H, 4zwl:A, 4zwl:B, 4zwl:C, 4zwl:D, 4zwl:E, 4zwl:F, 4zwl:G, 4zwl:H, 4zxu:A, 4zxu:B, 4zxu:C, 4zxu:D, 4zxu:E, 4zxu:F, 4zxu:G, 4zxu:H
28 3jb9:e 144 46 0.1319 0.0833 0.2609 7.9
29 7rj1:A 265 41 0.1099 0.0377 0.2439 7.9 7rj1:B, 7rj1:C, 7rj1:D
30 7q1c:A 427 44 0.1429 0.0304 0.2955 8.0 7q1b:A, 7q1c:B
31 6s54:A 453 25 0.0989 0.0199 0.3600 8.4 6s54:B, 6s54:C, 6s54:D
32 6am0:F 178 39 0.1538 0.0787 0.3590 8.7 6am0:B
33 4gwq:G 170 43 0.1319 0.0706 0.2791 8.9 5sva:M, 7ui9:f, 7uif:f, 7uig:f, 7uio:Af, 7uio:Bf

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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