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BioLiP
>protein
CGKCWKTFTDEQLKVLPGVRCPYCGYKIIFMVRKPTIKIVKAI

The query sequence (length=43) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2y0s:P 45 43 1.0000 0.9556 1.0000 3.09e-26 4ayb:P, 3hkz:P, 3hkz:X, 2pmz:P, 2pmz:Z, 4v8s:AX, 4v8s:BP, 2waq:P, 2wb1:P, 2wb1:X, 2y0s:X
2 7ok0:P 47 43 0.8140 0.7447 0.8140 2.92e-22 7oq4:P, 7oqy:P
3 9bct:P 48 43 0.4419 0.3958 0.4419 3.33e-04 9bcu:P, 4qiw:P, 4qiw:W
4 8cro:P 48 43 0.3953 0.3542 0.3953 0.010 8oki:P, 8orq:P, 8p2i:P, 8rbo:P
5 8a3y:L 47 42 0.3023 0.2766 0.3095 0.033 7a6h:L, 7ae3:L, 7aea:L, 7b0y:L, 8b3d:L, 8b3f:L, 7b7u:L, 8bvw:L, 8byq:L, 8bz1:L, 7d58:L, 7d59:L, 7dn3:L, 7du2:L, 7edx:z, 7eg7:z, 7eg8:z, 7eg9:z, 7ega:z, 7egb:z, 7egc:z, 7ena:PL, 7enc:PL, 6exv:L, 7f4g:L, 7fji:L, 7fjj:L, 5flm:L, 6gmh:L, 6gml:L, 8gxq:PL, 8gxs:PL, 8ity:L, 8iue:L, 8iuh:L, 5iy6:L, 5iy7:L, 5iy8:L, 5iy9:L, 5iya:L, 5iyb:L, 5iyc:L, 7lbm:L, 7nvr:L, 7nvs:L, 7nvt:L, 7nvu:L, 7nvy:L, 7nvz:L, 7nw0:L, 6o9l:L, 7ob9:L, 7oba:L, 7obb:L, 8oeu:L, 8oev:L, 8oew:L, 8of0:L, 5oik:L, 7okx:L, 7oky:L, 7ol0:L, 7oo3:L, 7oob:L, 7oop:L, 7opc:L, 7opd:L, 7ozn:L, 7ozn:X, 7ozo:L, 7ozo:X, 7ozp:L, 7ozp:X, 8p4a:L, 8p4b:L, 8p4e:L, 8p4f:L, 7pks:L, 8rbx:L, 8s51:L, 8s52:L, 8s5n:L, 6ted:L, 8uha:L, 8uhd:L, 8uhg:L, 8ui0:L, 8uis:L, 7vba:L, 7vbb:L, 7vbc:L, 8w8e:L, 8w8f:L, 8wak:z, 8wal:z, 8wan:z, 8wao:z, 8wap:z, 8waq:z, 8war:z, 8was:z, 8wat:z, 8wau:z, 8wav:z, 8waw:z, 8wax:z, 8way:z, 8waz:z, 8wb0:z, 6xre:L, 7ycx:a, 7zwd:L, 7zx7:L, 7zx8:L
6 6a5o:L 45 33 0.2791 0.2667 0.3636 0.12 6a5p:L, 8h0v:L, 8h0w:L, 8he5:L, 6ir9:L, 6j4w:L, 6j4x:L, 6j4y:L, 6j4z:L, 6j50:L, 6j51:L, 8jh2:L, 8jh3:L, 8jh4:L, 7wbv:L, 7wbw:L, 7wbx:L, 7xn7:L, 5xog:L, 5xon:L, 7xse:L, 7xsx:L, 7xsz:L, 7xt7:L, 7xtd:L, 7xti:L, 8yfq:L, 8yfr:L
7 5x50:L 46 33 0.2791 0.2609 0.3636 0.22
8 8j22:C 285 21 0.2558 0.0386 0.5238 0.45 8t3s:R
9 6knb:B 1120 36 0.3256 0.0125 0.3889 0.76 6knc:B
10 8ppt:B 1191 38 0.3256 0.0118 0.3684 1.2 8ppu:B, 8ppv:B, 6t8h:B
11 8hil:L 46 41 0.3256 0.3043 0.3415 1.2 7eu0:L, 7eu1:L, 8him:L, 8hyj:L, 8xmb:L, 8xmc:L, 8xmd:L, 8xme:L
12 8bws:L 50 33 0.2326 0.2000 0.3030 2.7 4a3b:L, 4a3c:L, 4a3d:L, 4a3e:L, 4a3f:L, 4a3g:L, 4a3i:L, 4a3j:L, 4a3l:L, 4a3m:L, 4a93:L, 2b63:L, 2b8k:L, 4bbr:L, 4bbs:L, 6blo:L, 6blp:L, 6bm2:L, 6bm4:L, 6bqf:L, 4bxx:L, 4bxz:L, 4by7:L, 4c2m:1, 4c2m:L, 4c3h:L, 4c3i:L, 4c3j:L, 5c4j:L, 8cen:L, 8ceo:L, 6cnb:L, 6cnc:L, 6cnd:L, 6cnf:L, 3cqz:L, 2e2h:L, 2e2i:L, 2e2j:L, 6eu0:L, 6eu1:L, 6eu2:L, 6eu3:L, 6f41:L, 6f42:L, 6f44:L, 5fj8:L, 5fj9:L, 5fja:L, 5fmf:L, 5fyw:L, 5fz5:L, 5g5l:L, 3gtg:L, 3gtj:L, 3gtk:L, 3gtm:L, 3gtp:L, 3gtq:L, 3h3v:M, 6h67:L, 6h68:L, 6hko:L, 6hlq:L, 6hlr:L, 6hls:L, 3hou:L, 3hou:X, 3hov:L, 3how:L, 3hox:L, 3hoy:L, 3hoz:L, 1i3q:L, 3i4m:L, 3i4n:L, 1i50:L, 1i6h:L, 6i84:L, 5ip7:L, 5ip9:L, 3j0k:L, 2ja5:L, 2ja6:L, 2ja7:L, 2ja7:X, 2ja8:L, 9ja1:L, 8jch:L, 3k1f:L, 8k5p:L, 3k7a:L, 1k83:L, 7ked:L, 7kee:L, 7kef:L, 5lmx:L, 5m3f:L, 5m3m:L, 3m4o:L, 5m5w:L, 5m5x:L, 5m5y:L, 5m64:L, 7mei:L, 7mk9:L, 7ml0:L, 7ml1:L, 7ml2:L, 7ml4:L, 5n5y:L, 5n5z:L, 5n60:L, 5n61:L, 7nkx:L, 7nky:L, 2nvq:L, 2nvt:L, 2nvx:L, 2nvy:L, 2nvz:L, 7o4i:L, 7o4j:L, 6o6c:J, 7o72:L, 7o73:L, 7o75:L, 5oa1:L, 5ot2:L, 3po2:L, 3po3:L, 3qt1:L, 1r5u:L, 2r7z:L, 1r9s:L, 1r9t:L, 2r92:L, 2r93:L, 7rim:L, 7rip:L, 7riq:L, 7riw:L, 7rix:L, 7riy:L, 6rqt:L, 6ruo:L, 6rwe:L, 3rzd:L, 3rzo:L, 3s14:L, 3s15:L, 3s16:L, 3s17:L, 3s1m:L, 3s1n:L, 3s1q:L, 3s1r:L, 3s2d:L, 3s2h:L, 1sfo:L, 5sva:L, 6tps:L, 6tut:L, 8tug:L, 8tvp:L, 8tvq:L, 8tvs:L, 8tvv:L, 8tvw:L, 8tvx:L, 1twa:L, 1twc:L, 1twf:L, 1twg:L, 1twh:L, 5u5q:L, 8u9r:L, 8u9x:L, 8ukq:L, 8ukr:L, 8uks:L, 8ukt:L, 8uku:L, 6upx:L, 6upy:L, 6upz:L, 6uq0:L, 6uq1:L, 6uq2:L, 6uq3:L, 4v1m:L, 4v1n:L, 4v1o:L, 5vvr:L, 5vvs:L, 5w4u:L, 5w51:L, 5w5y:L, 5w64:L, 5w65:L, 5w66:L, 1wcm:L, 4x67:L, 4x6a:L, 1y1v:L, 1y1w:L, 4y52:L, 1y77:L, 4y7n:L, 4ym7:AL, 4ym7:BL, 4ym7:CL, 4ym7:DL, 4ym7:EL, 4ym7:FL, 2yu9:L, 7z0h:L, 7z1l:L, 7z1m:L, 7z1n:L, 7z1o:L, 7z2z:L, 7z30:L, 7z31:L, 7zs9:L, 7zsa:L, 7zsb:L
13 4pfb:A 308 14 0.1628 0.0227 0.5000 3.2
14 3tto:A 1055 13 0.2093 0.0085 0.6923 3.7 3tto:B, 3tto:C, 3tto:D, 3ttq:A, 4ttu:A, 4tvc:A, 4tvd:A
15 7bkb:H 438 12 0.1860 0.0183 0.6667 4.2 7bkb:h, 7bkc:H, 7bkc:h
16 2ct2:A 88 45 0.3023 0.1477 0.2889 4.2 5fey:A, 5fey:B
17 3na7:A 237 29 0.2558 0.0464 0.3793 4.7
18 2yjz:A 174 20 0.1628 0.0402 0.3500 5.9 2yjz:B, 2yjz:C, 2yjz:D
19 2y3c:A 278 32 0.2326 0.0360 0.3125 6.6
20 2dcu:A 407 13 0.1628 0.0172 0.5385 6.6 2d74:A, 1kjz:A, 1kk0:A, 1kk1:A, 1kk2:A, 1kk3:A
21 4xa7:A 226 26 0.2558 0.0487 0.4231 6.7
22 8fgw:B 1152 26 0.2558 0.0095 0.4231 6.9 8fh3:B
23 7ok0:A 880 17 0.2093 0.0102 0.5294 7.0 7oq4:A, 7oqy:A
24 8ikx:A 390 18 0.1628 0.0179 0.3889 7.8
25 5goy:A 598 27 0.2326 0.0167 0.3704 8.4 5gl7:A
26 3hkz:A 836 20 0.2326 0.0120 0.5000 8.4 3hkz:I, 2y0s:A, 2y0s:W
27 4qiw:A 863 19 0.2093 0.0104 0.4737 8.5 4qiw:I
28 6kf4:A 901 19 0.2093 0.0100 0.4737 8.5 9bct:A, 9bcu:A, 6kf9:A
29 8a1y:C 253 26 0.2558 0.0435 0.4231 8.8 8a1t:C, 8a1u:C, 8a1v:C, 8a1w:C, 8a1x:C, 8acw:C, 8acy:C, 8ad0:C, 8evu:C, 8ew3:C, 4u9s:C, 7xk3:C, 7xk4:C, 7xk5:C, 7xk6:C, 7xk7:C
30 4ayb:A 872 17 0.2093 0.0103 0.5294 8.9 2pmz:A, 2pmz:Q, 4v8s:AW, 4v8s:BA, 2waq:A, 2wb1:A, 2wb1:W
31 2r6f:B 879 16 0.1860 0.0091 0.5000 8.9
32 4etl:A 277 17 0.1860 0.0289 0.4706 9.1 4esm:A, 4jpx:A, 4jpy:A, 1ltv:A, 1ltz:A, 4q3w:A, 4q3x:A, 4q3y:A, 4q3z:A, 3tcy:A, 3tk2:A, 3tk4:A
33 2r6f:A 899 8 0.1395 0.0067 0.7500 9.3
34 3uwx:A 945 8 0.1395 0.0063 0.7500 9.3

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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