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BioLiP
>protein
AYSITLRSPDGAEEVVQCEEDQYILEAAEDAGLDMPSSCRAGACSACLGKVLEGSVNNEEQSFLDDDQLEEGWSLLCVAM
PQSDCVILTEQEDNLD

The query sequence (length=96) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6vjv:A 96 96 1.0000 1.0000 1.0000 1.61e-65 6vjv:B
2 6khi:1 98 95 0.5938 0.5816 0.6000 2.60e-38 5aui:A, 7fix:R1, 7fix:R2, 7fix:R3, 6jo2:A, 6l7o:R, 1roe:A, 5zf0:P1, 5zf0:P2, 5zf0:P3, 5zf0:P4, 5zf0:P6, 5zf0:P5
3 5auk:A 96 95 0.5729 0.5729 0.5789 8.36e-37 1dox:A, 1doy:A, 2kaj:A, 1off:A, 2pvg:C, 2pvo:D
4 1awd:A 94 94 0.5833 0.5957 0.5957 1.26e-35
5 4fxc:A 98 96 0.5417 0.5306 0.5417 1.31e-34
6 1rfk:B 97 96 0.5417 0.5361 0.5417 6.88e-34 3p63:A, 3p63:B, 1rfk:A
7 7akt:A 107 94 0.5312 0.4766 0.5426 2.28e-33 6kum:A, 6kum:B, 6kv0:A, 6kv0:B, 6lk1:A, 6lk1:B, 2mh7:A, 2n0s:B, 7wzn:G
8 3ab5:A 97 95 0.5521 0.5464 0.5579 2.65e-33 3ab5:B, 3wcq:A
9 6xtf:D 96 95 0.5312 0.5312 0.5368 3.94e-33 6xtf:C
10 1a70:A 97 95 0.5417 0.5361 0.5474 4.02e-33
11 3b2g:A 98 96 0.5104 0.5000 0.5104 1.64e-32 3b2g:B
12 7s3d:X 97 96 0.5104 0.5052 0.5104 2.56e-32 7s3d:W, 7s3d:x
13 7y5e:NN 99 95 0.5417 0.5253 0.5474 2.92e-32 7y5e:N2, 7y7a:N7, 7y7a:No
14 1frr:A 95 95 0.5521 0.5579 0.5579 6.98e-32 1frr:B
15 3av8:A 97 96 0.5208 0.5155 0.5208 1.16e-31 3av8:B, 3av8:C, 3av8:D, 1fxi:A, 1fxi:B, 1fxi:C, 1fxi:D
16 1iue:A 98 94 0.4896 0.4796 0.5000 1.45e-31 1iue:B
17 5h57:A 97 94 0.5208 0.5155 0.5319 1.72e-31 5h57:B, 5h57:C, 5h57:D, 5h57:E, 5h57:F, 5h5j:B
18 4itk:A 104 94 0.4896 0.4519 0.5000 3.02e-31
19 6yac:N 97 95 0.5104 0.5052 0.5158 5.08e-31 6yez:N
20 4zho:A 97 95 0.5000 0.4948 0.5053 8.41e-31 4zho:B
21 1czp:A 98 96 0.5000 0.4898 0.5000 1.15e-30 1czp:B, 1ewy:C, 1fxa:A, 1fxa:B, 1j7a:A, 1j7b:A, 1j7c:A, 1qoa:A, 1qoa:B, 1qob:A, 1qob:B, 1qof:A, 1qof:B, 1qog:A, 1qog:B, 1qt9:A
22 1pfd:A 96 95 0.4792 0.4792 0.4842 5.14e-30
23 1gaq:B 98 95 0.5000 0.4898 0.5053 4.12e-29 3b2f:A, 3b2f:B, 5h8y:E, 5h8y:F, 5h92:C, 3w5u:B, 3w5u:D, 3w5u:F, 3w5u:H, 3w5v:B, 3w5v:D
24 6iri:A 107 95 0.4583 0.4112 0.4632 4.74e-28
25 4zhp:A 98 95 0.4792 0.4694 0.4842 1.58e-26
26 1wri:A 93 95 0.4583 0.4731 0.4632 2.09e-26
27 8jc1:A 267 80 0.4167 0.1498 0.5000 4.16e-21 8jc1:B, 8jc1:C, 8jc1:D
28 1frd:A 98 80 0.3958 0.3878 0.4750 2.81e-17
29 4n58:A 266 85 0.3750 0.1353 0.4235 3.32e-16 4n58:B, 4n59:A, 4n59:B
30 1doi:A 128 82 0.3542 0.2656 0.4146 4.94e-14
31 1e0z:A 128 83 0.3542 0.2656 0.4096 1.23e-13 1e10:A
32 3zyy:X 628 83 0.2812 0.0430 0.3253 1.74e-07 4c1n:J, 4c1n:I, 4c1n:K, 4c1n:X, 3zyy:Y
33 5ogx:A 333 71 0.2708 0.0781 0.3662 1.98e-07
34 1jq4:A 98 86 0.2812 0.2755 0.3140 4.65e-05
35 2pia:A 321 68 0.1979 0.0592 0.2794 1.14e-04
36 1krh:A 337 90 0.2188 0.0623 0.2333 1.72e-04 1krh:B
37 1i7h:A 109 68 0.2500 0.2202 0.3529 6.56e-04 1i7h:B, 1i7h:C
38 6kbh:A 765 40 0.1667 0.0209 0.4000 0.001
39 6icm:D 87 66 0.1875 0.2069 0.2727 0.002
40 7c3b:B 306 41 0.1458 0.0458 0.3415 0.002
41 4wqm:A 326 66 0.2500 0.0736 0.3636 0.006
42 6laa:A 753 73 0.1667 0.0212 0.2192 0.008 6gii:A, 6ldl:A
43 7c3b:C 334 41 0.1458 0.0419 0.3415 0.015 7c3a:A, 7c3a:B, 7c3a:C, 7c3b:A
44 6x89:S1 688 56 0.2083 0.0291 0.3571 0.35 8e73:S1
45 7ylr:A 326 67 0.1562 0.0460 0.2239 0.43
46 2mjd:A 115 46 0.1667 0.1391 0.3478 0.55 2mje:A
47 5frt:E 105 28 0.1042 0.0952 0.3571 1.1 5ffi:E
48 7pkq:b 241 32 0.1667 0.0664 0.5000 1.1
49 5frt:A 119 28 0.1042 0.0840 0.3571 1.4 5ffi:A, 5ffi:B, 5ffi:C, 5ffi:D, 5frt:B, 5frt:C, 5frt:D, 6yav:E, 6yav:A, 6yav:B, 6yav:C, 6yav:D
50 7p8n:a 642 46 0.1354 0.0202 0.2826 3.1 7p5h:A, 7p5h:D, 7p5h:a, 7p5h:d, 7p8n:A, 7p91:a, 7p91:A, 7p92:A
51 3ah7:A 109 68 0.2396 0.2110 0.3382 3.1
52 7a23:C 693 34 0.1458 0.0202 0.4118 3.3 7a24:C, 7aqr:G, 7ar7:G, 7ar8:G, 7arb:G, 8bed:G, 8bpx:G, 8bq5:G, 8bq6:G
53 2gke:A 274 59 0.1562 0.0547 0.2542 4.4 2gkj:A
54 3lxf:A 104 50 0.1667 0.1538 0.3200 4.4 3lxf:B, 3lxf:C, 3lxf:D, 3lxf:E
55 7arc:G 682 44 0.1458 0.0205 0.3182 5.2 7ard:G
56 6eci:R 109 34 0.0938 0.0826 0.2647 5.6 6eci:G
57 6eci:P 132 34 0.0938 0.0682 0.2647 6.8 6eci:A, 6eci:B, 6eci:C, 6eci:D, 6eci:E, 6eci:F, 6eci:H, 6eci:I, 6eci:J, 6eci:K, 6eci:L, 6eci:M, 6eci:N, 6eci:O, 6eci:Q, 6eci:S, 6eci:T
58 3gvh:A 318 45 0.1354 0.0409 0.2889 7.6 3gvh:B, 3gvh:C, 3gvh:D, 3gvi:A, 3gvi:B, 3gvi:C, 3gvi:D, 3gvi:E, 3gvi:F
59 3poa:A 96 36 0.1146 0.1146 0.3056 8.2

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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