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BioLiP
>protein
AWDEWSPWSLCSSTCGRGFRDRTRTCRPPQPCEGPEKQTKFCNIALCP

The query sequence (length=48) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7r84:A 52 52 1.0000 0.9231 0.9231 4.26e-28 7r84:C, 7r84:D
2 7r84:B 45 47 0.9375 1.0000 0.9574 3.29e-26 7r85:A, 7r86:C
3 7r86:D 40 47 0.8333 1.0000 0.8511 1.40e-21
4 7yyk:A 114 54 0.5208 0.2193 0.4630 2.88e-09 1lsl:A
5 7yyk:A 114 54 0.4583 0.1930 0.4074 7.51e-08 1lsl:A
6 6ool:A 244 34 0.3750 0.0738 0.5294 1.25e-06
7 5foe:B 435 48 0.4167 0.0460 0.4167 3.12e-06 5foe:A
8 7za1:E 251 34 0.3333 0.0637 0.4706 5.71e-06 7za1:F, 7za1:H, 7za2:E, 7za2:G, 7za3:E, 7za3:G
9 8ckk:B 121 47 0.3542 0.1405 0.3617 5.59e-05 8ckg:A, 8ckg:B, 8ckk:A, 8ckl:A, 8ckl:B
10 6qig:A 581 52 0.4167 0.0344 0.3846 5.95e-05 3ghm:A, 3ghn:A, 3vn4:A
11 6rus:A 234 54 0.4167 0.0855 0.3704 1.97e-04 7b26:A, 7noz:C, 8q6r:C, 8q6r:E, 6rur:X, 6rur:U, 6ruv:X, 6ruv:U, 6rv6:A, 6s08:B, 6s0a:B, 6s0b:B, 6sej:A
12 6rus:A 234 39 0.3125 0.0641 0.3846 0.036 7b26:A, 7noz:C, 8q6r:C, 8q6r:E, 6rur:X, 6rur:U, 6ruv:X, 6ruv:U, 6rv6:A, 6s08:B, 6s0a:B, 6s0b:B, 6sej:A
13 6rus:A 234 25 0.2500 0.0513 0.4800 0.60 7b26:A, 7noz:C, 8q6r:C, 8q6r:E, 6rur:X, 6rur:U, 6ruv:X, 6ruv:U, 6rv6:A, 6s08:B, 6s0a:B, 6s0b:B, 6sej:A
14 4hqo:A 257 20 0.2500 0.0467 0.6000 5.17e-04 4hql:A, 4hql:B, 4hqn:A, 4hqn:B
15 6rus:B 220 52 0.4167 0.0909 0.3846 0.002 7b26:B, 7noz:D, 8q6r:D, 8q6r:F, 6rur:V, 6rur:Y, 6ruv:V, 6ruv:Y, 6rv6:B, 6s08:A, 6s0a:A, 6s0b:A, 6sej:B
16 6rus:B 220 32 0.3125 0.0682 0.4688 0.27 7b26:B, 7noz:D, 8q6r:D, 8q6r:F, 6rur:V, 6rur:Y, 6ruv:V, 6ruv:Y, 6rv6:B, 6s08:A, 6s0a:A, 6s0b:A, 6sej:B
17 4e0s:B 898 51 0.3958 0.0212 0.3725 0.015 7nyc:B, 7nyd:B
18 4e0s:B 898 20 0.1875 0.0100 0.4500 4.8 7nyc:B, 7nyd:B
19 4a5w:B 871 51 0.3958 0.0218 0.3725 0.016
20 4a5w:B 871 20 0.1875 0.0103 0.4500 5.0
21 3t5o:A 871 47 0.3958 0.0218 0.4043 0.059
22 3t5o:A 871 20 0.1875 0.0103 0.4500 5.1
23 7nyc:D 487 48 0.4375 0.0431 0.4375 1.3 7nyd:D
24 7mq8:SI 844 14 0.1667 0.0095 0.5714 3.8 7mq9:SI
25 6brh:B 502 18 0.1667 0.0159 0.4444 4.2 6brg:A, 6brg:B, 6brg:C, 6brg:D, 6brh:A, 6brk:A
26 7mqa:SI 803 14 0.1667 0.0100 0.5714 4.4
27 5lzb:z 614 12 0.1667 0.0130 0.6667 5.6 5lzc:z, 5lzd:z, 2pjp:A
28 1x6h:A 86 33 0.2083 0.1163 0.3030 8.1

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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